BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488017 Length=2003 Score E Sequences producing significant alignments: (Bits) Value AT5G11800.1 | Symbols: KEA6, ATKEA6 | K+ efflux antiporter 6 | ... 3075 0.0 > AT5G11800.1 | Symbols: KEA6, ATKEA6 | K+ efflux antiporter 6 | chr5:3803336-3808207 REVERSE LENGTH=2231 Length=2231 Score = 3075 bits (1665), Expect = 0.0 Identities = 1873/1967 (95%), Gaps = 40/1967 (2%) Strand=Plus/Plus Query 54 TCCGGTTTAATCCAGAACCAGTTCTTCTGCCATGGTGGAA-GAAGGAGGAAGAAGAAGA- 111 ||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||||| Sbjct 108 TCCGGTTTAATCCAGAACCAGTTGTTCTGCCATGGTGGAAGGAA-GAAGAAGAAGAAGAT 166 Query 112 ---AG--ATCCTCTCAACAACTAGCTCTCCTCTTACTTTTACTCTCCTTCTTCCTCTGCT 166 | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 167 TCTCGCTCTCCTCTCAACAGCTAGCTCTCCTCTTACTTTTACTCTCCTTCTTCCTCTGCT 226 Query 167 TCTCCGTCGTGTCTCCTCGAGCTATATCTGATTCGGATCTGTTGGAAGAATCCGTCGCCA 226 ||||||||| |||||||||||||||||||||||||||||| |||| ||| | ||||||| Sbjct 227 TCTCCGTCGCGTCTCCTCGAGCTATATCTGATTCGGATCTACTGGATGAAACAGTCGCCA 286 Query 227 ACTCCTCCTCCTCCGTCGCATCTCTCAACG------CTTCTTCTTCAATTGTTAAG-CTC 279 |||||||||| ||||||||||||||||||| |||||||||| |||||||| || Sbjct 287 ACTCCTCCTCTTCCGTCGCATCTCTCAACGCTTCTTCTTCTTCTTCTCTTGTTAAGCCT- 345 Query 280 AAGGAAGGTAGCTTCGCCGACATCATCGATCGTGCTCTCGAAAAAGAGTTCAACGAAAGC 339 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 346 AAGGAAGGTAGCTTCGCCGACATCATCGATCGTGCTCTTGAAAAAGAGTTCAATGAAAGC 405 Query 340 GACCAGAATGAAGTGGCTGATCCTGGAAGCTTCAATAACAGTGTAGCTGGACAACAGGCT 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406 GACCAGAATGAAGTGGCTGATCCTGGAAGCTTCAATAACAGTGTAGCTGGACAACAGGCT 465 Query 400 GTTCTGGAAACTGTAGCCAGAGTAAAGTCAACCAAGAAAAATGAGACAAAAGAGGACAAG 459 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| Sbjct 466 GTTCTGGAAACTGTAGCCCGAGTAAAGTCGACCAAGAAAAATGAGACAAAAGAGGAGAAG 525 Query 460 CGTTTCCAACTCCATGATGTTTTCAATTTGAACAATGATAACAGAGCTGAGGACACTCCT 519 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 526 CGTTTTCAACTCCATGATGTTTTCAACTTGAACAATGATAACAGAGCTGAGGACACTCCA 585 Query 520 ACTCTCATTGATCGAAAAGACAATGTCTTCATCATATCCAATTCCAAATCAAAGTATCCA 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 586 ACTCTCATTGATCGAAAAGACAATGTCTTCATCATATCCAATTCCAAATCAAAGTATCCA 645 Query 580 GTATTGCAGCTAGACTTGAGACTGATATCGGACCTGGTGGTTGTCATTGTATCTGCAACT 639 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 646 GTATTGCAGCTAGACTTGAGACTGATATCAGACCTGGTGGTTGTCATTGTATCTGCAACT 705 Query 640 TGTGGTGGTATCGCCTTTGCTTGTGCTGGACAGCCGGTGATAACTGGATATTTGCTAGCA 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 706 TGTGGTGGTATCGCCTTTGCTTGTGCTGGACAGCCGGTGATAACTGGATATTTGCTAGCA 765 Query 700 GGATCTATCATTGGGCCTGGAGGATTGAACTTCATCAGTGAGATGGTCCAGGTTGAAACA 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 GGATCTATCATTGGGCCTGGAGGATTGAACTTCATCAGTGAGATGGTCCAGGTTGAAACA 825 Query 760 GTTGCCCAGTTTGGTGTGGTATTTCTGCTCTTCGCTTTGGGTCTAGAGTTCTCCACTGCT 819 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 826 GTTGCCCAGTTTGGTGTGGTATTTCTGCTCTTTGCTTTGGGTCTAGAGTTCTCCACTGCT 885 Query 820 AAGCTTAAAGTTGTTCGATCAGTTGCTGTTCTAGGAGGCCTTCTTCAAATTCTTCTATTC 879 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 886 AAGCTTAAAGTTGTTCGATCAGTTGCTGTTCTGGGAGGCCTTCTTCAAATTCTTCTATTC 945 Query 880 ATGTTCTTGTGCGGGATCACAGTGTCGTTATGCGGTGGTAAACATTCGGAGGGGGTGTTT 939 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 946 ATGTTCTTGTGCGGTATCACAGTGTCGTTATGCGGTGGTAAACGTTCGGAGGGGGTATTT 1005 Query 940 GTAGGCGCCTTTTTGTCAATGTCATCAACTGCGGTGGTGCTGAAGTTTCTCATGGaaaaa 999 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1006 GTAGGAGCCTTTTTGTCAATGTCATCAACTGCGGTGGTGCTGAAGTTTCTCATGGAAAAG 1065 Query 1000 aaTTCAACTAATTCTCTTCATGGCCAAGTTACGATTGGAATCCTAATTCTTCAGGACTGT 1059 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 AATTCAACTAATTCTCTTCATGGCCAAGTTACGATTGGAATCCTAATTCTTCAGGACTGT 1125 Query 1060 GCTGTGGGTTTGCTGTTTGCTTTGCTTCCCGTTCTTGAGGGAAATTCTGGCATTGTTCAT 1119 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 1126 GCTGTGGGTTTGCTGTTTGCTTTGCTTCCAGTTCTCGAGGGAAATTCTGGCATTGTTCAT 1185 Query 1120 GGAATGTTGTCAATGGGAAAAGTGGTGGTTGTGTTACTTTCGTTTTTGGCAGTTTTGTCA 1179 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||| Sbjct 1186 GGAATGTTGTCAATAGGAAAAGTGGTGGTTTTGTTGCTTTCGTTTTTGGCTGTTTTGTCA 1245 Query 1180 ATATTATCACGGACATTTATTCCTTGGTTGCTGAAGCTAATGGTCAGCTTATCGTCACAG 1239 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1246 ATATTATCACGGACATGTATTCCTTGGTTGCTGAAGCTAATGGTCAGCTTATCGTCACAG 1305 Query 1240 ACAAATGAACTCTATCAGTTAGCGGCTGTTGCGTTTTGTCTACTTGTAGCCTGGTGTAGT 1299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1306 ACAAATGAACTCTATCAGTTAGCGGCTGTTGCGTTTTGTCTACTTGTAGCCTGGTGTAGT 1365 Query 1300 GATAAGCTGGGATTAAGTCTTGAATTGGGTTCTTTTGCCGCGGGGGTCATGATATCCACT 1359 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1366 GATAAGCTGGGATTAAGTCTTGAATTGGGTTCTTTTGCTGCGGGGGTCATGATATCCACT 1425 Query 1360 ACTGATCTCGCTGAACATACATTGGAGCAAATCGAACCCATCCGTAATTTATTTGCTGCC 1419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1426 ACTGATCTCGCTGAACATACATTGGAGCAAATCGAACCCATCCGTAATTTATTTGCTGCT 1485 Query 1420 CTTTTCCTAGCCAGCATTGGAATGTTAGTTAATGTCCATTTTCTGTGGACACATGTGGAT 1479 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1486 CTTTTCCTAGCCAGCATTGGGATGTTAGTTAATGTCCATTTTCTGTGGACACATGTGGAT 1545 Query 1480 ATACTGTTAGCCTCTGTGATATTAGTAATTATAATAAAGACAACAATAGTTACAACCGTT 1539 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1546 ATACTGTTAGCCTCTGTGATATTAGTTATTATTATAAAGACAACAATAGTTACAACCGTT 1605 Query 1540 GTTAAAGGATTTGGATACAACAATAAGACGGCTCTCCTGGTTGGAATATCTCTGGCTCAG 1599 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1606 GTTAAGGGATTTGGATACAACAATAAGACGGCTCTTCTGGTTGGAATATCTCTGGCTCAG 1665 Query 1600 ATAGGGGAGTTTGCCTTTGTACTACTTAGCCGTGCCTCCAATCTTCACCTCATCGAAGGG 1659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1666 ATAGGGGAGTTTGCCTTTGTACTACTTAGCCGTGCCTCCAATCTTCACCTCATCGAAGGG 1725 Query 1660 AAACTCTATTTGCTTCTCCTCGGGACAACCGCTCTAAGCCTGGTTACGACACCGCTGATT 1719 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 1726 AAACTCTATCTGCTTCTCCTTGGGACAACCGCTCTAAGCCTGGTTACGACACCGCTGGTT 1785 Query 1720 TTCAAAATGATACCAGCAGTTGTGCATCTTGGGATATTGTT-AAAGTGGTTTTCTCCAGA 1778 ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| Sbjct 1786 TTCAAAATGATACCAGCAGTTGTACATCTTGGGATATTGTTGAAA-TGGTTTTCTCCAGA 1844 Query 1779 CAGTACTATAGAGAAAGGAGAAATTGTAAGATCAGAAAGCGGTAAACAACGGGTGATTCT 1838 ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct 1845 CAGTACTATAGAGAAAGGAGAAATTGTAAGATCAGAAAGTGGGAAACAACGGATGATTCT 1904 Query 1839 AATGTCACGTCAATCCCACAGCTCCTAAAACCACAAT-TGTTTCTTCTCAACTGAAGTTT 1897 |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| Sbjct 1905 AATGTCACGTCAATCCCACAGCTCCTAAAACCACAAAATGTT-CTTCTCAACTAAAGTTT 1963 Query 1898 GGTACAC-CAATCAATTTTGACCCaaaaaaaaaaTGTGGAAAGGAGAAGAAGAGCTACAG 1956 ||||||| |||||||||||||| |||| ||||||||||||| |||||| || | | Sbjct 1964 GGTACACTCAATCAATTTTGAC--AAAAGAAAAATGTGGAAA--AGAAGA-GA---A-A- 2013 Query 1957 ATTTTAACACAGATTTTAACACTAACATTGTTTGTTTCCTGGGAGTA 2003 | | |||||||||||||||||||||||||||||||||||| Sbjct 2014 A----A-----GATTTTAACACTAACATTGTTTGTTTCCTGGGAGTA 2051 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 99246477465 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5