BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488037 Length=858 Score E Sequences producing significant alignments: (Bits) Value AT5G11950.1 | Symbols: | Putative lysine decarboxylase family ... 1345 0.0 AT5G26140.1 | Symbols: LOG9, ATLOG9 | Putative lysine decarboxy... 390 1e-107 > AT5G11950.1 | Symbols: | Putative lysine decarboxylase family protein | chr5:3854968-3856983 FORWARD LENGTH=923 Length=923 Score = 1345 bits (728), Expect = 0.0 Identities = 827/872 (95%), Gaps = 18/872 (2%) Strand=Plus/Plus Query 1 TTCttttttttttttGTTTGACGGCTTGAGGGAATACGTTGATTTTGTAGATTTTTATCC 60 |||| |||||||||||||||||| | ||||||||||| |||| ||||||||||||||||| Sbjct 42 TTCTCTTTTTTTTTTGTTTGACGACCTGAGGGAATACCTTGA-TTTGTAGATTTTTATCC 100 Query 61 ACTAATGGAAGATAATAACCAGCGACGCAGATTCAGAAAAATTTGTGTGTTTTGCGGAAG 120 | |||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||| Sbjct 101 ATTAATGGAAGATAAT---CAGCGAAGCAGATTCAGAAAAATCTGTGTCTTTTGCGGAAG 157 Query 121 CCACTCTGGTCACCGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGT 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 CCACTCTGGTCACAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGT 217 Query 181 GAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 218 GAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATC 277 Query 241 CAGGAGAGTCTATGAAGGTGGTTTCCATGTACTCGGGATCATTCCCAAAGCTTTGATGCC 300 |||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct 278 CAGGAGAGTCTATGAAGGTGGTTTACATGTACTTGGAATCATTCCCAAAGCTTTGATGCC 337 Query 301 AACTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCG 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 338 AATTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCG 397 Query 361 AAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAAC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 398 AAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAAC 457 Query 421 AATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 458 AATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGT 517 Query 481 TGGTCTACTGAATGTTGATGGATACTATAACAATTTGCTTGCTTTATTTGACACCGGTGT 540 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 518 TGGTCTATTGAATGTTGATGGGTACTATAACAATTTGCTTGCTTTATTTGATACCGGTGT 577 Query 541 CGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 578 CGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAA 637 Query 601 AGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACAAGCAGGTTGCATCGCACGA 660 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 638 AGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACATGCATGTTGCATCGCACGA 697 Query 661 AAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACTACAAAACAAGCCGCAATAAAA 720 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 698 AAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACAAGAAAACAAGCCGCAATAAAA 757 Query 721 ----TTA-----G-----CATAAGCTACTTCCATTTCAAGTTTAGCCTCTAAATTAATTG 766 ||| | ||||||||| ||||||||||||||||| |||||||||| ||| Sbjct 758 GCAATTATTATTGTTTAGCATAAGCTATTTCCATTTCAAGTTTAGTCTCTAAATTATTTG 817 Query 767 CTGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTG 826 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 818 CAGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTG 877 Query 827 GGTTCCCAAAATGAAAGTGTTGCTGATTATGT 858 ||| ||||| |||||| ||||||||||||||| Sbjct 878 GGTCCCCAACATGAAAATGTTGCTGATTATGT 909 > AT5G26140.1 | Symbols: LOG9, ATLOG9 | Putative lysine decarboxylase family protein | chr5:9130796-9131636 FORWARD LENGTH=432 Length=432 Score = 390 bits (211), Expect = 1e-107 Identities = 350/417 (84%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 308 ATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCG-AAAGGC 366 ||||||||||||||||| ||||| |||||| ||||| |||||||||| ||||| ||| || Sbjct 16 ATATCTGGTGAGACTGTTGGAGAGGTAAGAATTGTTTCAGACATGCACGAGCGCAAA-GC 74 Query 367 TGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCT--G-GAG-GTTATGGAACAA 422 | ||||||| || ||||||| ||| |||||||| || ||| | ||| | |||| ||| | Sbjct 75 TACAATGGCTCAAGAAGCTGGGGCTTTCATTGCGCT-CCTAGGCGAGAGGTATGAAACTA 133 Query 423 TGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGTTG 482 ||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 134 TGGAGGAACTACTGGAGATGATAACATGGGCACAGCTTGGTATCCATAAGAAGACGGTTG 193 Query 483 GTCTACTGAATGTTGATGGATACTATAACAATTTGCTTGCTTTATTTGACACCGGTGTCG 542 |||| ||||||||||||| ||||||||||||||||||||||| |||||||| || || | Sbjct 194 GTCTTTTGAATGTTGATGGTTACTATAACAATTTGCTTGCTTTCTTTGACACTGGAGTTG 253 Query 543 AAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAAAG 602 ||||||||||||| || | |||||| |||| || || ||||| || ||| | || | || Sbjct 254 AAGAAGGTTTTATTAAACAAGGTGCTTGTAATATCGTTGTTTCCGCGCCATCGGCTAGAG 313 Query 603 AGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACAAGCAGGTTGCATCGCACGAAA 662 | |||||||||||||||||| ||||||||||||||||||| | |||| || ||| ||| Sbjct 314 AACTTATGGAGAAGATGGAGCTATATACTCCTTCACACAAGTACATTGCTTCTCACCAAA 373 Query 663 GCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACTACA--A-AACAAGCCGCAAT 716 |||||||||||||| ||| ||||||||||| |||| | | |||||||| |||| Sbjct 374 GCTGGAAAGTTGAACCACTTGGAGATTACCCACTACTAAATGAGAACAAGCCTCAAT 430 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41845044451 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5