BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488161 Length=1627 Score E Sequences producing significant alignments: (Bits) Value AT5G13420.1 | Symbols: | Aldolase-type TIM barrel family prote... 2460 0.0 > AT5G13420.1 | Symbols: | Aldolase-type TIM barrel family protein | chr5:4301792-4304312 REVERSE LENGTH=1705 Length=1705 Score = 2460 bits (1332), Expect = 0.0 Identities = 1511/1592 (95%), Gaps = 33/1592 (2%) Strand=Plus/Plus Query 1 AAAACTCCACCAACCCCATTTTT-AGCCCCTTTC-TTGTTTTTATCCTCCCATCGATCAA 58 |||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||||| Sbjct 1 AAAACTTCACCAACCCCATTTTTAAGCCCCTTTCTTTGTTTTTATCCTCCGATCGATCAA 60 Query 59 ACCAAGAAAAAACTCTTTCATATTTCACC-CGACGAAAGAAATGGCAACCATTTCGAATC 117 ||||||||||||| ||||| |||||| || |||||||| ||||||||||||||||||||| Sbjct 61 ACCAAGAAAAAACACTTTCGTATTTC-CCTCGACGAAAAAAATGGCAACCATTTCGAATC 119 Query 118 TCGCTAATCTTCCCCGCGCCACCTGCGTCGACTCCAAATCTTC-T--TC-T--TCCGTCT 171 ||||||||||||||||||||||||||||||||||||||||||| | || | ||||||| Sbjct 120 TCGCTAATCTTCCCCGCGCCACCTGCGTCGACTCCAAATCTTCTTCCTCTTCCTCCGTCT 179 Query 172 TACCTAGATCCTTCGTTAATTTCCGCGGTTTGAATGCAAAGCTTTCCTCTTCTCAGCTTT 231 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 180 TACCTAGATCCTTCGTCAATTTCCGCGCTTTGAATGCAAAGCTTTCCTCTTCTCAGCTTT 239 Query 232 CTCTTCGTTATAACCAACGATCAAGACCTTCCCTCTCTGTGAGGTGTTCAGTGTCTGGTG 291 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 240 CTCTTCGTTATAACCAACGATCAATACCTTCCCTCTCTGTGAGGTGTTCAGTGTCTGGTG 299 Query 292 GAAATGGAACTGCTGGAAAGAGAACGACTCTTCATGATCTATATGAGAAGGAAGGTCAGA 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 GAAATGGAACTGCTGGAAAGAGAACGACTCTTCATGATCTATATGAGAAGGAAGGTCAGA 359 Query 352 GTCCTTGGTATGATAATCTATGCCGTCCAGTCACAGATCTTCTCCCCTTGATTGCTCGTG 411 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 360 GTCCTTGGTATGATAATCTTTGCCGTCCAGTCACAGATCTTCTCCCGTTGATTGCTCGTG 419 Query 412 GTGTTAGAGGCGTTACTAGCAACCCTGCGATCTTCCAGAAAGCCATTTCCACTTCTAATG 471 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 420 GTGTTAGAGGTGTTACTAGCAACCCTGCGATCTTCCAAAAAGCCATTTCCACTTCAAATG 479 Query 472 CTTATAATGATCAGTTCAGGACACTTGTGGAATCAGGAAAGGACATTGAAAGTGCGTATT 531 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 480 CTTATAATGATCAATTCAGGACACTTGTGGAATCGGGAAAGGACATTGAAAGTGCGTATT 539 Query 532 GGGAACTTGTGGTGAAGGATATTCAGGATGCCTGCAAACTTTTTGAGCCAATCTATGACC 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GGGAACTTGTGGTGAAGGATATTCAGGATGCCTGCAAACTTTTTGAGCCAATCTATGACC 599 Query 592 AAACAGAAGGTGCTGATGGCTATGTCTCTGTTGAAGTTTCACCTAGGCTTGCTGATGATA 651 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 AGACAGAAGGTGCGGATGGCTATGTCTCTGTTGAAGTTTCACCTAGGCTTGCTGATGATA 659 Query 652 CCCAAGGGACTGTTGAAGCTGCTAAATATCTTAGCAAGGTTGTCAACCGTCGTAATGTCT 711 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 CCCAAGGAACTGTTGAAGCTGCTAAATATCTTAGCAAGGTTGTCAACCGTCGTAATGTCT 719 Query 712 ACATTAAGATCCCGGCTACTGCTCCATGCATTCCTTCCATCAGGGATGTCATTGCATCTG 771 |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 720 ACATTAAGATTCCTGCTACTGCTCCATGCATTCCTTCCATCAGGGATGTCATTGCAGCTG 779 Query 772 GAATAAGTGTCAATGTCACGCTTATATTCTCAATCGCCAGATATGAAGCAGTGATCGATG 831 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 GAATAAGTGTCAATGTCACGCTTATATTCTCAATCGCCAGATATGAAGCAGTGATCGATG 839 Query 832 CATATTTGGACGGCCTCGAGGCGTCTGGACTTGATGACCTCTCAAGAGTTACCAGTGTTG 891 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CATATTTGGATGGCCTCGAGGCGTCTGGACTTGATGACCTCTCAAGAGTTACCAGTGTTG 899 Query 892 CTTCCTTCTTTGTCAGTCGGGTGGATACTCTCATGGACAAGATGCTTGAGCAAATTGGTA 951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 CTTCCTTCTTTGTCAGTCGGGTGGATACTCTCATGGACAAGATGCTTGAGCAAATTGGTA 959 Query 952 CCCCTGAAGCCCTAGATCTCCGTGGCAAGGCGGCTGTGGCTCAAGCTGCATTAGCATACA 1011 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 960 CCCCTGAAGCCTTAGATCTCCGTGGGAAGGCGGCTGTGGCTCAAGCTGCATTAGCATACA 1019 Query 1012 AGCTGTACCAGCAGAAATTCTCAGGCCCAAGATGGGAAGCTCTGGTTAAGAAAGGTGCCA 1071 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1020 AGCTATACCAGCAGAAATTCTCTGGCCCAAGATGGGAAGCTCTGGTAAAGAAAGGTGCCA 1079 Query 1072 AGAAGCAGAGGCTTCTCTGGGCATCGACAAGTGTTAAGAACCCAGCTTACTCTGACACCT 1131 |||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1080 AGAAACAGAGACTTCTCTGGGCATCAACAAGTGTAAAGAACCCAGCTTACTCTGACACCT 1139 Query 1132 TATATGTCGCTCCTCTCATCGGACCTGACACTGTTTCAACCATGCCGGATCAAGCCCTGG 1191 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1140 TATATGTCGCTCCTCTCATCGGACCTGACACTGTATCAACCATGCCGGATCAAGCCCTGG 1199 Query 1192 AAGCATTTGCAGATCATGGAATCGTGAAGAGGACAATAGATGCGAATGTGTCAGAAGCAG 1251 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1200 AAGCATTCGCAGATCATGGAATAGTGAAGAGGACAATAGATGCGAATGTGTCAGAAGCAG 1259 Query 1252 AAGGGATATACAGTGCACTAGAGAAGCTGGGAATAGACTGGAACAAAGTAGGGGAACAGT 1311 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1260 AAGGGATTTACAGTGCACTAGAGAAGCTGGGAATAGACTGGAACAAAGTAGGAGAACAGT 1319 Query 1312 TGGAAGACGAAGGAGTAGATTCGTTCAAGAAGAGTTTCGAGAGCCTGCTAGGTACACTGC 1371 |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct 1320 TGGAAGACGAAGGAGTAGATTCCTTCAAGAAGAGTTTCGAGAGTCTGCTCGGTACACTGC 1379 Query 1372 AAGACAAGGCCAACACTCTCAAACTAGCCAGCCATTGAGGA--T----CAT--T-ATGTT 1422 ||||||||||||||||||||||||||||||||||||||||| | ||| | ||||| Sbjct 1380 AAGACAAGGCCAACACTCTCAAACTAGCCAGCCATTGAGGAAATGAGTCATCATTATGTT 1439 Query 1423 TTTGGTGGGTAAACCCTAAAATaaaaaaaGAAGAACCTTTGGCTTTTGTTCTTCAACCCT 1482 |||||| || | |||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1440 TTTGGT---TA--CGCTAAAATAAAAA--GAAGAACCTTTGGCTTTTGTTCTTCAATCCT 1492 Query 1483 TATTATGTATGCTTTCTAAAGTTGTTATAATGGCTTTTGCTTGATGTTCCACATTATGAT 1542 ||| | |||||||||||||| ||||| |||| |||||||||||||||||||||||| Sbjct 1493 TAT---GCATGCTTTCTAAAGTGGTTATGATGGATTTTGCTTGATGTTCCACATTATG-- 1547 Query 1543 GGGT-T-CTATCTTCTTTGTTCTTGCAAGATG 1572 || | | |||| ||||||||||||| |||||| Sbjct 1548 GGTTATTCTATTTTCTTTGTTCTTGTAAGATG 1579 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80371072545 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5