BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488280 Length=452 Score E Sequences producing significant alignments: (Bits) Value AT5G14410.1 | Symbols: | unknown protein; Has 23 Blast hits to... 769 0.0 > AT5G14410.1 | Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:4646781-4647444 REVERSE LENGTH=564 Length=564 Score = 769 bits (416), Expect = 0.0 Identities = 440/452 (97%), Gaps = 0/452 (0%) Strand=Plus/Plus Query 1 TCTAATCCATTTTCCATGGCTTCCTCTCCCAAAATCACTAATCTCCCTTACAAGAGGCTT 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 32 TCTAATCCATTTTCCATGGATTCCTCTCCCAAAATCACTAATCTCCCTTACAAGAGGCTT 91 Query 61 TCTCTAGAAGATGATGTCTTCGGCGAAACAACAAGAAGAAGATCGTCATTCTATTCTTAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 TCTCTAGAAGATGATGTCTTCGGCGAAACAACAAGAAGAAGATCGTCATTCTATTCTTAC 151 Query 121 AGGTTCAGGAGAGTGGTGTCACTGGGAGGAAGAAGGAGGATTAGGGTTAGAGTTAAGATC 180 ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 152 AGGTTCAAGCGAGTGGTGTCATTGGGAGGAAGGAGGAGGATTAGGGTTAGAGTTAAGATC 211 Query 181 CGAAGACTTAGAGGATTTGTGAGGAAGAAAGCGAATAGGGTCAAAACTGGAATTATAAAA 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 212 CGAAGACTTAGAGGATTTGTGAGGAAGAAAGCGAATAGGGTAAAAACTGGAATTTTAAAA 271 Query 241 ATATTGAAGAGGTTGAAGGAGAGTCAATCACACTTTGGTGATCTCTTTGCTGGTAATTAC 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 272 ATATTGAAGAGGTTGAAGGAGAGTCAATCACACTTTGGTGATCTCTTTGCCGGTAATTAC 331 Query 301 CTTTTCATGCAAGTTAATCCTTCTTCTCTTAACACTAAGTATGTCTTCGACAAATCTTTT 360 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 332 CTTTTCATGCAAGTTAATCCTTCTTCTCTTAACGCTAAGTATGTCTTCGACAAATCTTTT 391 Query 361 CAAAGCCAAAATGGTAACTTCCCCTCTAGATTATCTCTTCCTAGAGTTCTTATGTAAAGA 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 CAAGGCCAAAATGGTAACTTCCCCTCTAGATTATCTCTTCCTAGAGTTCTTATGTAAAGA 451 Query 421 CTGATAAACAATAACTATAGTTATGTTTCTGT 452 | |||||||| ||||||||||||||||||||| Sbjct 452 CGGATAAACATTAACTATAGTTATGTTTCTGT 483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21514596572 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5