BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488341 Length=1226 Score E Sequences producing significant alignments: (Bits) Value AT5G14970.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1934 0.0 > AT5G14970.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). | chr5:4847278-4848867 FORWARD LENGTH=1265 Length=1265 Score = 1934 bits (1047), Expect = 0.0 Identities = 1174/1234 (95%), Gaps = 14/1234 (1%) Strand=Plus/Plus Query 1 gagagagaaaagaaga-agaaacagaaacaga----gagCTCGAGACTCTCTCTTATTAA 55 |||||||| ||||| | ||||||||||||||| ||||||||||| ||| |||||| Sbjct 34 GAGAGAGAGAAGAA-ACAGAAACAGAAACAGAGCTCGAGCTCGAGACGCTC-AATATTAA 91 Query 56 TGGCGGCCGCATCAGCACGAGCCTTCTTCATGCTCTCTCGTGTAACGGACCTATCAAAGA 115 |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct 92 TGGCGGCCGCATCAGCACGAGCTTTCTTCATGCTCTCTCGTGTAACTGACCTTTCAAAGA 151 Query 116 AGAAGCTAATCCTTCACCAACCACCACCGTCTTCGTCTCCTCACCGGTTACCTTGTGCTC 175 | ||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||| Sbjct 152 AAAAGCTAATCCTTCACCAACCACCACCGTCGTCATCTCCTCACCGGCTACCTTATGCTC 211 Query 176 CGAATCGTGCCGTGTCTTCCTCCGCTGTAATTAGCTGTCTCAGCGGTGGTGGAGTTTCCT 235 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 212 CGAATCGTGCGGTGTCTTCCTCCGCTGTAATCAGCTGTCTCAGCGGTGGTGGTGTTTCCT 271 Query 236 CCGACGATTCATATGTGTCTACTCGTCGGTCTAAGTTAGATCGAGGTTTCGCTGTGATCG 295 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 272 CCGACGATTCGTATGTATCTACTCGTCGGTCTAAGTTAGATCGAGGTTTCGCTGTGATCG 331 Query 296 CGAATTTGGTGAACCGGATCCAGCCGCTTGATACGTCTGTTATCTCTAAAGGCTTATCCG 355 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 332 CGAATTTGGTGAATCGGATCCAGCCGCTTGATACGTCTGTTATCTCTAAAGGCTTATCTG 391 Query 356 ATTCAGCTAAGGATTCGATGAAGCAGACGATTTCTTCTATGCTTGGACTTCTTCCTTCCG 415 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 392 ATTCAGCTAAGGATTCGATGAAACAGACGATTTCTTCTATGCTTGGTCTTCTTCCTTCCG 451 Query 416 ATCAATTCTCCGTTTCCGTTACCATCTCCGAGA-AGCCTCTTTACCGTCTCCTTATTTCT 474 ||||||| |||||||||||||| |||||||| | |||||||||| ||||||||||||||| Sbjct 452 ATCAATTTTCCGTTTCCGTTACTATCTCCGA-ACAGCCTCTTTATCGTCTCCTTATTTCT 510 Query 475 TCCATCATCACCGGGTATACATTGTGGAATGCGGAGTATCGTGTATCACTGAGGAGGAAT 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 511 TCCATCATCACCGGGTATACATTGTGGAATGCGGAGTATCGTGTATCACTGAGGAGGAAT 570 Query 535 TTCGATATACCGATTGATCCTAGAAAGGAGGAGGAGGATCAATCTTCGAAAGACAATGTT 594 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 571 TTTGATATACCGATTGATCCTAGAAAGGAGGAGGAGGATCAATCTTCGAAAGACAATGTT 630 Query 595 AGATTTGGTTCAGAGAAGGGAGTGAGTGAGGACTTAGGGAATTGTGTTGAGGAATTTGAG 654 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 631 AGATTTGGTTCAGAGAAGGGAATGAGTGAGGATTTAGGGAATTGTGTTGAGGAATTTGAG 690 Query 655 AGATTGAGTCCTCAGGTGTTTGGAGACTTGTCACCTGAAGCGTTGAGCTATATTCAGCAT 714 ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 691 AGACTGAGTCCTCAGGTGTTTGGAGACTTGTCACCTGAAGCGTTGAGTTATATTCAGCTT 750 Query 715 TTGCAGTCTGAGTTATCTTCCATGAAAGAGGAGCTAGATTCACAAAAGAAGAAAGCTTTA 774 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 751 TTGCAGTCTGAGCTATCTTCCATGAAAGAGGAGCTAGATTCACAAAAGAAGAAAGCTTT- 809 Query 775 CA-GATAGAATGTGAGAAAGGAAACAAGAATGATTTGTTGGATTATTTGCGTTCCTTAGA 833 | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 810 GAGGATAGAATGTGAGAAAGGAAACAGGAATGATTTGTTGGATTATTTGCGTTCTTTAGA 869 Query 834 TCCCAAGATGGTGACTGAGTTATCTCAACTGTCTTCACCGGAAGTGGAAGAGATCGTGAA 893 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 870 TCCCGAGATGGTGACTGAGTTATCTCAACTGTCTTCACCGGAAGTGGAAGAGATTGTGAA 929 Query 894 CCAACTTGTCCAAAACGTGTTAGAGAGGCTCTTCGAAGACCAGACTACTTCAAATTTCAT 953 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 930 CCAGCTTGTCCAAAACGTATTAGAGAGGCTCTTCGAAGACCAGACTACTTCAAATTTCAT 989 Query 954 GCAAAATCCTGGCATAAGGACTACAGATGGTGGTGATGGAACTGGTAGAAAGGTAGACAC 1013 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 990 GCAAAATCCTGGCATAAGGACTACAGAAGGTGGTGATGGAACTGGTAGAAAGGTGGACAC 1049 Query 1014 ATCCAGGGATTACCTTGCAAAGCTCCTTTTCTGGTGCATGCTATTGGGACATCATTTAAG 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1050 ATCCAGGGATTACCTTGCAAAGCTCCTTTTCTGGTGCATGCTATTGGGACATCATTTAAG 1109 Query 1074 AGGTTTGGAGAATAGATTACATCTCAGTTGTGTCGTTGGGTTGCTGTAATATCAGAGAAT 1133 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1110 AGGTTTGGAGAATAGATTACATCTCAGCTGTGTTGTTGGGTTGCTGTAATATCAGAGAAT 1169 Query 1134 CAGAAAAAGGAGACCCaaaa-aaaaaaGAAACACCAATGTATATTCTTCTCCCTCATTTT 1192 || ||||||||||| || | ||||||||||||| |||||||||||||||||| |||||| Sbjct 1170 CATAAAAAGGAGAC--AAGATAAAAAAGAAACACAAATGTATATTCTTCTCCCCCATTTT 1227 Query 1193 GATTTCTTTAATCTAAGCGTTAAGTTATTATCTA 1226 |||||||||||||||||||||||||||||||||| Sbjct 1228 GATTTCTTTAATCTAAGCGTTAAGTTATTATCTA 1261 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60240654000 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5