BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488578 Length=1068 Score E Sequences producing significant alignments: (Bits) Value AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein | chr5:... 1600 0.0 > AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein | chr5:5649193-5651158 FORWARD LENGTH=1141 Length=1141 Score = 1600 bits (866), Expect = 0.0 Identities = 1012/1078 (94%), Gaps = 28/1078 (3%) Strand=Plus/Plus Query 3 AAAACGCATGCAACAACATTGATTCAATTAAGAATCAATC-AAGCTTCTTCGTTCGATCA 61 ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| Sbjct 72 AAAACGCATGCAACAACATCGA---AATTAAGAATCAATCAAAGCTTCTTCGTTCGATCA 128 Query 62 CACTAGaaaaaaaGAT-G----G-CTGGTGCGATTTCAGGAGCTACTGTCTCTTCCTTCT 115 ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct 129 CACTAGAAAGAAAGATGGCAACGTCTGGTGCGATTTCAGGAGCTACTGTCTCTTCCTTCT 188 Query 116 TCACCAAAACTGCTTCTACTTCAAACCCATCTCCTAAACTCCACTACTCTGCTTCTCTGT 175 ||||||||||| || ||||||||||||||||||| |||||||| | |||||||||||| | Sbjct 189 TCACCAAAACTACTACTACTTCAAACCCATCTCCCAAACTCCATTCCTCTGCTTCTCT-T 247 Query 176 TT-TCACAGAAAACTGGGTTTCAGGGAGTTTCATTGGAAGATTCGAAGAAGAGTGTATCA 234 || ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| Sbjct 248 TTATCACAGAAAACTGTGTTTCAAGGAGTTTCGTTGGAAGATTCGAAGAAGAGTGTATCA 307 Query 235 GAGATCTTCGTTGTCTCCAAGAGAAAGATTGGAGGGTTAAATGGGTTGAGAAGATTCGAA 294 |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 308 GAGATCTTCGCTGTCTCCGAGAGAAAGATCGGAGGGTTAAATGGGTTGAGAAGATTCGAA 367 Query 295 ATCAAAGCGAGAGCAGCAGCTTCTAAAACAATAGAGGTTGAAGTAGACAAGCCTTTGGGT 354 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 368 ATCAAAGCGAGAGCAGCAGCTTCTAAGACAATAGAGGTTGAAGTAGATAAGCCTTTGGGT 427 Query 355 CTGACTCTAGGACAGAAGCCAGGCGGTGGAGTTGTCATCACCGGTGTGGACGGAGGTGGG 414 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 428 CTGACTCTAGGACAGAAGCAAGGCGGTGGAGTTGTCATCACCGGTGTGGACGGAGGAGGG 487 Query 415 AACGCAGCAAAAGCAGGGCTTAAATCTGGAGATCAAGTGGTGTACACAAGCAGCTTCTTT 474 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 488 AACGCAGCAAAAGCAGGGCTTAAATCTGGAGATCAAGTTGTGTACACAAGCAGTTTCTTT 547 Query 475 GGAGATGAGCTTTGGCCTGCAGATAAGCTTGGCTTTACTAAAACCGCTATTCAGGCCAAA 534 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct 548 GGAGATGAGCTTTGGCCTGCAGATAAGCTTGGCTTTACTAAAACTGCAATTCAGGCAAAA 607 Query 535 CCTGATTCTGTCTACTTTGTTGTTAGCAGAGGTGCAGAAGTTGATGTCAAGAAACTAAAT 594 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 608 CCTGATTCTGTCTACTTTGTTGTTAGCAGAGGTGCAGAAGTTGATGTTAAGAAACTAAAT 667 Query 595 AAGCGTCCAGCTCCTCCACGGTTTGGAAGGAAGTTAACTGAGACTCAGAAGGCAAGTA-C 653 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 668 AAGCGTCCGGCTCCTCCACGGTTTGGAAGGAAGTTAACTGAGACTCAGAAGGCAAG-AGC 726 Query 654 TACTCACATTTGTCTTGATTGTGGATTCATATACACTTTACCCAAATCTTTTGATGAACA 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 727 TACTCACATTTGTCTTGATTGTGGATTCATATACACTTTACCCAAATCTTTTGACGAACA 786 Query 714 GCCGGATACATACGTATGTCCTCAATGTATAGCACCAAAGAAGAGGTTTGCGAAGTATGA 773 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 787 GCCGGATACATACGTATGTCCTCAATGTATAGCACCAAAGAAGAGGTTTGCAAAGTATGA 846 Query 774 CGTGAACACAGGAAAGGCCATTGGAGGAGGATTGCCTCCAATTGGTGTCATTGTTGGCTT 833 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 847 CGTGAACACAGGAAAGGCCATAGGAGGAGGATTGCCTCCAATTGGTGTCATTGTTGGCTT 906 Query 834 ATTGGCCGGTCTTGGAGCTGTCGGAGCTTTGCTAGTCTATGGTCTTCAATAGATTTT-CT 892 ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| || Sbjct 907 ATTGGCCGGTCTTGGAGCTGTTGGAGCTTTGCTTGTCTATGGTCTTCAATAAATTTTTCT 966 Query 893 -AAACACTTTTATAATCTCTATAAAACAAGTCCTTATTTGAGCTTTGTAATTGTAAACCA 951 ||| |||||||||||||||||||||||||||| | ||||||||||| |||||| Sbjct 967 TAAA-ACTTTTATAATCTCTATAAAACAAGTCC------G--CTTTGTAATTGCAAACCA 1017 Query 952 AGAATGAATGTTGATGACATCAACTTGGGAGTTAAACTATTGTAAAGCATTTTTTGATTC 1011 ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||| Sbjct 1018 AGAATGAATGTTGATGACATCAACTTGAGAGTTAAATTAT-GTAAAGCATTTTTCGATTC 1076 Query 1012 TCTCCTTCTTATGTAACT-TTGGTTCTCTCTATAGTCAAATTAGTGCAGCAGCAAGAG 1068 |||||||||||||||||| ||| || ||||| || ||||| ||||||||||||||||| Sbjct 1077 TCTCCTTCTTATGTAACTCTTGTTT-TCTCTGTAATCAAACTAGTGCAGCAGCAAGAG 1133 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52308967890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5