BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488603 Length=1853 Score E Sequences producing significant alignments: (Bits) Value AT5G17380.1 | Symbols: | Thiamine pyrophosphate dependent pyru... 2832 0.0 > AT5G17380.1 | Symbols: | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr5:5724759-5726746 REVERSE LENGTH=1906 Length=1906 Score = 2832 bits (1533), Expect = 0.0 Identities = 1738/1836 (95%), Gaps = 17/1836 (1%) Strand=Plus/Plus Query 2 ATGGCGGATAATTCAGCAACCACTCCACCGTCAATTGATGGCAACGTTCTCGTGGCCAAG 61 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 27 ATGGCGGATAAATCAGAAACCACTCCACCGTCAATTGATGGCAACGTTCTCGTGGCCAAG 86 Query 62 TCACTATCTCATCTCGGCGTCACCCACATGTTCGGCGTCGTGGGAATCCCCGTCACGTCT 121 ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 87 TCACTCTCTCATCTCGGCGTAACCCACATGTTCGGCGTCGTTGGAATCCCCGTCACGTCT 146 Query 122 CTAGCTAGCCGAGCCATGGCTCTAGGCATACGTTTCATCGCCTTCCACAACGAACAATCC 181 |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 147 CTAGCTAGCCGAGCTATGGCTTTAGGTATACGTTTCATCGCCTTCCACAACGAACAATCC 206 Query 182 GCCGGATACGCCGCTTCTGCTTACGGTTACCTCACGGGTAAACCCGGTATCCTTCTT-AC 240 || || ||||||||||| |||||||||||||||||||||||||| ||||||||| || || Sbjct 207 GCTGGTTACGCCGCTTCAGCTTACGGTTACCTCACGGGTAAACCGGGTATCCTT-TTAAC 265 Query 241 GGTTTCGGGTCCGGGTTGCGTTCACGGGCTCGCGGGTCTTTCCAACGCTTGGGCTAATAC 300 |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct 266 GGTTTCGGGTCCGGGTTGTGTTCATGGGCTCGCGGGTCTTTCCAACGCTTGGGTTAATAC 325 Query 301 ATGGCCGATGGTGATGATCTCTGGTTCTTGTGATCAGAGAGATGTTGGTCGTGGAGATTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 ATGGCCGATGGTGATGATCTCTGGTTCTTGTGATCAGAGAGATGTTGGTCGTGGAGATTT 385 Query 361 CCAGGAGCTTGATCAGATCGAAGCTGTGAAAGCTTTTTCGAAATTATCGGAGAAAGCGAA 420 |||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||| Sbjct 386 CCAGGAGCTTGATCAGATCGAAGCGGTTAAAGCTTTCTCGAAATTATCAGAGAAAGCGAA 445 Query 421 AGATGTTCGTGAAATCCCTAATTGTGTTTCTAGGGTTTTGGATCGAGCTGTTGCGGGTCG 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 446 AGATGTTCGTGAAATCCCTGATTGTGTTTCTAGGGTTTTGGATCGAGCTGTTTCGGGTCG 505 Query 481 ACCCGGTGGGTGTTATCTGGATATTCCGACTGATGTGTTACGTCAGAAGATTTCTGAATC 540 ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct 506 ACCCGGTGGGTGTTATCTGGATATTCCGACTGATGTGTTGCGTCAGAAGATATCGGAATC 565 Query 541 TGAAGCGGATAAATTGGTGGATGAGATTGTGAAATCTCTAAAGCAAGAACCGATTCG-GG 599 ||||| |||||||||||||||||| ||| || ||| | ||| ||||||||||||| || Sbjct 566 GGAAGCTGATAAATTGGTGGATGAGGTTGAGAGATCACGGAAGGAAGAACCGATTCGTGG 625 Query 600 AGTCTCTGAGATCGGAGATTGAATCGGCGGTTTCGTTGCTGAGGAAAGCTGAGAGGCCAT 659 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 626 A-TCTCTGAGATCGGAGATTGAATCGGCGGTTTCGTTGCTGAGGAAAGCTGAGAGGCCGT 684 Query 660 TGATTGTGTTTGGTAAAGGAGCTGCGTATTCGAGAGCAGAGGATGAGCTGAAGAAGCTTG 719 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 685 TGATTGTGTTTGGTAAAGGAGCTGCGTATTCGAGAGCAGAAGATGAGCTGAAGAAGCTTG 744 Query 720 TTGAAATTACTGGAATACCCTTCTTACCAACTCCGATGGGTAAAGGTTTGTTACCGGACA 779 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 745 TTGAAATTACTGGAATACCCTTTTTACCAACTCCGATGGGTAAAGGTTTGTTACCGGACA 804 Query 780 CACACGAGCTCTCGGCGACTGCGGCGAGGTCTCTTGCTATTGGGAAATGTGATGTTGCGT 839 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 805 CACACGAGTTCTCGGCGACTGCGGCGAGGTCTCTTGCTATTGGGAAATGTGATGTCGCGT 864 Query 840 TGGTGGTTGGAGCTAGGCTTAACTGGCTTCTTCATTTCGGAGAGTCGCCTAAATGGGATA 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 865 TGGTGGTTGGAGCTAGGCTTAACTGGCTTCTTCATTTCGGAGAGTCGCCTAAATGGGATA 924 Query 900 AAGATGTGAAATTTATATTGGTGGATGTCTCTGAGGAAGAGATTGAGCTTAGGAAACCTC 959 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 925 AAGATGTAAAATTTATATTGGTGGATGTCTCTGAGGAAGAGATTGAGCTAAGGAAACCTC 984 Query 960 ATTTGGGGATTGTTGGAGATGCTAAAACAGTGATTGGATTGTTGAACA-AGGAGATCAAA 1018 |||||||||||||||||||||||||||| ||||||||||||||||| | || |||||||| Sbjct 985 ATTTGGGGATTGTTGGAGATGCTAAAACTGTGATTGGATTGTTGAATAGAG-AGATCAAA 1043 Query 1019 GATGATCCTTTTTGTTTGGGGAAGTCTAATCCATGGGTGGAATCGATTTCGAAGAAGGCG 1078 || |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 1044 GACGATCCTTTTTGTTTAGGGAAGTCTAATTCATGGGTGGAATCGATTTCGAAGAAGGCG 1103 Query 1079 AAAGAGAACGGTGAGAAGATGGAGGCACAGCTTGCTAAAGATGTGGTTCCTTTCAATTTC 1138 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1104 AAAGAGAATGGTGAGAAGATGGAGATACAGCTTGCTAAAGATGTGGTTCCTTTCAATTTC 1163 Query 1139 TTGACTCCTATGAGGATAATCAGAGACGCGATTTTGGCGGTGGAAGGACCGAGTCCTGTT 1198 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1164 TTGACTCCTATGAGGATAATCAGAGACGCTATTTTGGCTGTGGAAGGACCGAGTCCTGTT 1223 Query 1199 GTGGTATCGGAAGGTGCTAATACAATGGATGTAGGAAGATCGGTTTTGGTTCAGAAAGAG 1258 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1224 GTGGTATCGGAAGGAGCTAATACAATGGATGTAGGAAGATCTGTTTTGGTTCAGAAAGAG 1283 Query 1259 CCAAGGACAAGGATTGATGCAGGAACTTGGGGAACAATGGGTGTTGGTTTAGGTTATTGT 1318 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1284 CCAAGGACAAGGCTTGATGCAGGAACTTGGGGAACTATGGGTGTTGGTTTAGGTTATTGT 1343 Query 1319 ATTGCTGCTGCTGTTGCTTCTCCTGATCGGCTTGTTGTCGCCGTTGAAGGAGACTCTGGT 1378 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1344 ATTGCTGCTGCTGTTGCTTCTCCTGATCGGCTTGTTGTCGCTGTTGAAGGAGACTCTGGT 1403 Query 1379 TTCGGATTCAGCGCCATGGAAGTTGAGACGTTGGTTCGATACAATCTACCTGTGGTGATT 1438 || || ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct 1404 TTTGGCTTCAGCGCCATGGAAGTCGAGACATTGGTTCGATACAATCTTGCTGTGGTGATT 1463 Query 1439 ATAGTCTTCAACAATGGTGGTGTATATGGTGGTGATCGAAGGGGTCCTGAAGAAATCTCC 1498 ||||||||||||||||||||||| || || |||||||||||||| ||||||||||||||| Sbjct 1464 ATAGTCTTCAACAATGGTGGTGTCTACGGCGGTGATCGAAGGGGACCTGAAGAAATCTCC 1523 Query 1499 GGTCCTCATAAAGAAGATCCAGCACCAACATCTTTTGTTCCTAATGCAGGCTACCACAAG 1558 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1524 GGTCCTCATAAAGAAGATCCAGCACCAACATCATTTGTTCCTAATGCAGGCTACCACAAG 1583 Query 1559 CTTATTGAAGCCTTTGGAGGCAAAGGTTATATTGTGGAAACACCTGATGAGCTTAAATCC 1618 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1584 CTCATTGAAGCCTTTGGAGGCAAAGGTTATATTGTGGAAACACCCGATGAGCTTAAATCC 1643 Query 1619 AG-TCTCGCTGAGTCGTTCGCCGCAAGAAAACCCGCAGTGGTTAACGTCGTCATCGATCC 1677 | ||||||||||||||||||||||||||||||||| ||||| || || | || ||||| Sbjct 1644 -GCTCTCGCTGAGTCGTTCGCCGCAAGAAAACCCGCGGTGGTAAATGTTATTATTGATCC 1702 Query 1678 TTTCGCTGGTGCTGAGAGTGGGAGATTACAGCACAAGAACTAAAA-GCTTTGTGGAGAGT 1736 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1703 TTTTGCTGGTGCTGAGAGTGGGAGATTACAGCACAAGAACTAAAAAGCTTTGTGGAGAGT 1762 Query 1737 ---TTTAATAATAATGTTGAAGTTGTTTGTTGTGAACaaaaaaaaaaaGAAGCGTTTTAG 1793 ||||| | ||||||||||||||||||||||||||||||| | | | |||||||| Sbjct 1763 CCCTTTAA-A-TAATGTTGAAGTTGTTTGTTGTGAACAAAAAGGATAT-A--CGTTTTAG 1817 Query 1794 TTTTCAGTTTTTCACTATTGTAAACCGGATCATAAA 1829 ||||| |||||||||||||||||||||||||||||| Sbjct 1818 TTTTCTGTTTTTCACTATTGTAAACCGGATCATAAA 1853 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91716395715 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5