BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488696 Length=1587 Score E Sequences producing significant alignments: (Bits) Value AT5G18240.1 | Symbols: MYR1, ATMYR1 | myb-related protein 1 | c... 2462 0.0 AT3G04030.3 | Symbols: | Homeodomain-like superfamily protein ... 994 0.0 AT5G18245.1 | Symbols: | other RNA | chr5:6028285-6033231 FORW... 745 0.0 > AT5G18240.1 | Symbols: MYR1, ATMYR1 | myb-related protein 1 | chr5:6028285-6030802 REVERSE LENGTH=1688 Length=1688 Score = 2462 bits (1333), Expect = 0.0 Identities = 1527/1615 (95%), Gaps = 36/1615 (2%) Strand=Plus/Plus Query 1 GAGAAAAAGAGCATAAATAAGGAAAGCAGCAAAGACATCTTCCCAAGTTGGTGGAGTTGC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16 GAGAAAAAGAGCATAAATAAGGAAAGCAGCAAAGACATCTTCCCAAGTTGGTGGAGTTGC 75 Query 61 TAACCATAGTGTATCTCTGAACTGAGGGCAGCAGGTTGCAATTAAAAACTAAAGATT-T- 118 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct 76 AAACCATAGTGTATCTCTGAACTGAGAGTAGCAGGTTGCAATTAAAAACTAAAGATTGTG 135 Query 119 T--GTCAGACTTATGTATTACCAAAACCAGCACCAAGGAAAGAGCATCCTCTCTTCATCG 176 | | |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 136 TCAGACAGACTTATGTATTACCACAACCAGCACCAAGGAAAGAGCATCCTCTCTTCATCG 195 Query 177 AGAATGCCCA-TTCATTCTGAAAGGAATCCGTTCCTCAGGGGAAATGGCACAGGAGATTC 235 |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 196 AGAATGCCCATTTC-TTCTGAAAGGCATCCGTTCCTCAGAGGAAATGGCACAGGAGATTC 254 Query 236 TGGACTCATCCTCTCAACTGATGCAAAGCCAAGACTAAAATGGACTCCAGATCTTCACGA 295 ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 255 TGGACTCATTCTCTCCACTGATGCAAAGCCACGACTAAAATGGACTCCAGATCTTCACGA 314 Query 296 GAGATTTGTTGAAGCGGTCAATCAGCTTGGAGGAGGAGATAAGGCTACTCCTAAGACAAT 355 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 315 GAGATTTGTTGAAGCGGTCAACCAGCTTGGAGGAGGAGATAAGGCTACTCCTAAGACAAT 374 Query 356 CATGAAAGTCATGGGTATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAA 415 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 375 CATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAA 434 Query 416 ATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGT 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 ATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGT 494 Query 476 GATGACCATGGTAGAAGAAAACCCTCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAG 535 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 495 GATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAG 554 Query 536 CATTGGACCACAGCCGACCATGAACTTGCCCATAAGTGATGCCCTTCAAATGCAAATAGA 595 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 555 CATTGGACCACAGCCGAGCATGAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGA 614 Query 596 GGTTCAGAGAAGGCTACACGAGCAACTTGAGGTACAGCGACATTTGCAGCTCAGGATAGA 655 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 615 GGTCCAGAGACGGCTACACGAGCAACTTGAGGTACAGCGACATTTGCAGCTCAGGATAGA 674 Query 656 GGCTCAAGGAAAGTACTTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACA 715 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 GGCTCAAGGAAAGTACCTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACA 734 Query 716 GAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAA 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 GAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAA 794 Query 776 AGTATCAGCAGAATATCCAGACTCTAGTTTCCTAGAACCGAAAGAACTCCAGAATCTACG 835 |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 795 AGTATCAGCAGACTATCCAGACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACA 854 Query 836 CCATCAACAGATGCAAACAGCCTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTC 895 ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 855 CCATCAACAGATGCAAAAAACGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTC 914 Query 896 AAGTGAAGGAAAC-CAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACAT 954 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 915 AAGTGAAGGAA-CTCAGAAAGCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACAT 973 Query 955 ATATCGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAACCATTCTTCCATCGAA 1014 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 974 ATATTGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAA 1033 Query 1015 TGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAGTAACAATAGGCCATATCTTT 1074 ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| Sbjct 1034 TGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTT 1093 Query 1075 CGACAATGGCTAACAACACAGAACCGAGAATCTCGTCATCAAGAAGAAGCCCTGGAAGAT 1134 | ||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||| Sbjct 1094 CAACAATGGTTAACAACGCAGAACCGAGAATCTCGTCTTCAAGAAGAAGTCCTGGAAGAT 1153 Query 1135 TGTCAATAGGAGTGGGATTACATGAACACAGAGGAGGGAGTAGCAACAACAGTGAGTATA 1194 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1154 TGTCAATAGGAGTGGGATTACATGAACACAGAGGAAGGAGTAGCAACAACAGTGAGTATA 1213 Query 1195 CAGAAGAAAGATTCAACGAGAATGGTGAAGATTGCAAGCTTGAAACACACACAAGAACAG 1254 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1214 CAGAAGAAAGATTCAACGAGAATAATGAAGATTGCAAGCTTGAAACACACACAAGAACAG 1273 Query 1255 CTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCGAAACAGTTTGATT 1314 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1274 CTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGTCCTAAACAGTTTGATT 1333 Query 1315 TGAATGGTTTCAGCTGGAATTGAGAAGAACATAGAAGCTT-A-AAGACTGCAACAACCTT 1372 | ||||||||||||||||||||||||||||| | |||||| | |||| |||||||||||| Sbjct 1334 TAAATGGTTTCAGCTGGAATTGAGAAGAACAAATAAGCTTTAGAAGAGTGCAACAACCTT 1393 Query 1373 TTTATGATAATCACACAGGAAATGAAAAGCCTTTGATTTCCTTTGTTAGATTGAGAGATT 1432 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 1394 TTTATGATAATCACACAGGAAATGAAAAGCCTTTGATTTCCTTTGTTAGCTTGAGGGATT 1453 Query 1433 CGTCTAAAA--------------C-AA---AA--GAGACAATCTTGTGCAAAAATGTGTA 1472 ||||||||| | || || |||||| |||||||||| ||||| | Sbjct 1454 CGTCTAAAAATTGAATTATTAGTCGAACTCAAAAGAGACA-TCTTGTGCAACAATGTACA 1512 Query 1473 ACACCATTAATTTGCGTAGTTATGATCTCatatatatatatataCAGATAAATTTACTAA 1532 |||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||| Sbjct 1513 ACACTATTAATTTGCGTAGTTATGATCTCATC-ATATA-A-ATACAGATAAATTTACTAA 1569 Query 1533 CTTCATGGAAGATA-TCGAAATTCTTGAGAGAAGGACGTAAAGTTCCGTGCTTTT 1586 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 1570 CTTCATGGAAGATACT-GAAATTCTTGAGAGAAGGACGTAAAGCTCCGTGCTTTT 1623 > AT3G04030.3 | Symbols: | Homeodomain-like superfamily protein | chr3:1042882-1044697 REVERSE LENGTH=1346 Length=1346 Score = 994 bits (538), Expect = 0.0 Identities = 1019/1242 (82%), Gaps = 69/1242 (6%) Strand=Plus/Plus Query 122 CAGAC-TTATGTATTACCAAAACCAGCACCAAGGAAAGAGCATCCTCTCTTCATCGAGAA 180 ||||| ||||||||||||||||||||||||||||||||| ||||||||| || || |||| Sbjct 116 CAGACTTTATGTATTACCAAAACCAGCACCAAGGAAAGAACATCCTCTCATCTTCAAGAA 175 Query 181 TGCCCAT-TCA-TTCTGAAAGGAATCCGTTCCTCAG-GGGAAAT-GGCACAGGAGATTCT 236 || ||| | | |||||||||| |||| ||||| || ||| ||| | | |||| |||||| Sbjct 176 TG--CATATAACTTCTGAAAGGCATCCATTCCTTAGAGGG-AATAGTC-CAGGTGATTCT 231 Query 237 GGACTCATCCTCTCAACTGATGCAAAGCCAAGACTAAAATGGACTCCAGATCTTCACGAG 296 ||||| ||||| ||||| |||||||||||| | ||||||||||||||||||||||| ||| Sbjct 232 GGACTTATCCTATCAACCGATGCAAAGCCACGCCTAAAATGGACTCCAGATCTTCATGAG 291 Query 297 AGATTTGTTGAAGCGGTCAATCAGCTTGGAGGAGGAGATAAGGCTACTCCTAAGACAATC 356 ||||| ||||||| |||||||| || || |||| |||||| |||||||||||||||||| Sbjct 292 AGATTCATTGAAGCAGTCAATCAACTCGGTGGAGCAGATAAAGCTACTCCTAAGACAATC 351 Query 357 ATGAAAGTCATGGGTATTCCAGGCCTTACCTTATACCATCTCAAGAGTCATCTTCAGAAA 416 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 352 ATGAAAGTCATGGGGATTCCAGGCCTTACCTTATACCATCTCAAAAGTCATCTTCAGAAA 411 Query 417 TATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACAAGTGTG 476 || ||||| ||||||||||| || ||||||||||||| ||| || ||||| | | || | Sbjct 412 TACAGGCTGAGCAAGAATCTCAACGGACAAGCTAACAACAGCTTCAACAAAATAGGTATA 471 Query 477 ATGACCATGGTAGAAGAAAACCCTCCTGAAGTAGACGAAAGTCACAGTGAGAGTTTAAGC 536 ||||||||| | |||||||| ||||||| | |||||||| ||| || |||| ||||||| Sbjct 472 ATGACCATGATGGAAGAAAAGACTCCTGATGCAGACGAAATTCAAAGCGAGAATTTAAGC 531 Query 537 ATTGGACCACAGCCGACCATGAACTTGC-CC-ATAAGTGATGCCCTTCAAATGCAAATAG 594 |||||||||||||| | || ||| || | || ||| |||| || || ||||||||||||| Sbjct 532 ATTGGACCACAGCCAAACAAGAA-TT-CACCAATAGGTGAAGCACTGCAAATGCAAATAG 589 Query 595 AGGTTCAGAGAAGGCTACACGAGCAACTTGAGGTACAGCGACATTTGCAGCTCAGGATAG 654 |||| || |||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct 590 AGGTCCAAAGAAGGCTTCATGAGCAACTTGAGGTACAGCGACATTTGCAGCTTAGGATAG 649 Query 655 AGGCTCAAGGAAAGTACTTGCAATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGAC 714 |||||||||| |||||| |||||||| || |||||||||||||||||||||||||||||| Sbjct 650 AGGCTCAAGGGAAGTACCTGCAATCGGTTTTGGAGAAAGCACAAGAGACTCTTGGAAGAC 709 Query 715 AGAACCTAGGTGCAGCTGGGATTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTA 774 ||||||| |||||||||||||| ||||| | |||| ||||||||| ||| ||||||||| Sbjct 710 AGAACCTCGGTGCAGCTGGGATCGAAGCTGCCAAAGTTCAACTCTCGGAACTAGTATCTA 769 Query 775 AAGTATCAGCAGAATATCCAGACTCTAGTTTCCTAGAACCGAAAGAACTCCAGAATCTAC 834 ||||||||||||| || ||| ||||||||||||||||||| |||||||| || || ||| Sbjct 770 AAGTATCAGCAGAGTACCCAAACTCTAGTTTCCTAGAACCAAAAGAACTTCAAAACCTAT 829 Query 835 GC-CATCAACAGATGCAAACAGCCTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACC 893 || || ||||||||||||||| |||||||||| | | ||| || || |||||||| ||| Sbjct 830 GCTCA-CAACAGATGCAAACAAACTATCCACCTGATTGCTCTCTTGAAAGTTGCCTGACC 888 Query 894 TCAAGTGAAGGAAAC-CAGAAAGCCCC-AAAGATGCTTGA---CAACAGACTGGGATTAA 948 ||||| || |||| | |||||| | | ||| ||||| || ||||||| | ||| ||| Sbjct 889 TCAAGCGAGGGAA-CGCAGAAAAACTCGAAA-ATGCTAGAGAACAACAGATTAGGACTAA 946 Query 949 GAACATATATCGGAGATTCAACTTCAGAGCAGAAAGAGATAATGGAAGAACCATTCTTCC 1008 |||| ||||| || |||||||| || |||||||||||||| |||||||||||||| |||| Sbjct 947 GAACGTATATTGGTGATTCAACATCGGAGCAGAAAGAGATTATGGAAGAACCATTGTTCC 1006 Query 1009 ATCGAATGGAGCTCACATGGGCAGAAGAAGAAAGCCTCAGAGAGAGTAACAATAGGCCAT 1068 | ||||||||||||||||| |||||| | | | |||| | | || | |||| Sbjct 1007 AAAGAATGGAGCTCACATGGACAGAAG--GT---C-TAAGAG-G-G-AA---T---CCAT 1051 Query 1069 ATCTTTCGACAATGGCTAAC--AACACAGAACCGAGAATCTCGTCAT-CAAGAA-GAAGC 1124 ||||||| ||||||| | | || |||||| |||||||| | || || ||| |||| Sbjct 1052 ATCTTTCAACAATGG-TGAGTGAAG-CAGAACAAAGAATCTCAT-ATTCA-GAAAGAAGT 1107 Query 1125 CCTGGAAGATTGTCAATAGGAGTGGGATTACATGAACACAGAGG--AGGGAGT-AGCAA- 1180 || || ||||| ||||||||||| ||||| || | ||||| | | | | | | ||| Sbjct 1108 CCAGGTAGATTATCAATAGGAGTAGGATTGCACGGACACAAAAGCCAAC-A-TCAACAAG 1165 Query 1181 -CAACAGTGAGTATACAGAAGAAAGATTCAACGAGAATGGTGAAGATTGCAAGC-TTGAA 1238 ||||| |||| || || ||| || || ||| || | ||| | ||| | || || Sbjct 1166 GCAACAATGAGGAT-CATAAGCTTGAAACA-CGA-AACCG-GAA-AG-GCATGGATTCAA 1219 Query 1239 ACACACACAAGAACAGCTCTAGATCTTAACACACACGACGAAAACTATGGCACAACGCGT 1298 || ||| || ||| |||||| |||||||| | ||||||||| | ||||||||| Sbjct 1220 -CA-ACA---GA---GCT--AGATCTCAACACACATGTTGAAAACTATTGTACAACGCGT 1269 Query 1299 CCGAAACAGTTTGATTTGAATGGTTTCAGCTGGAATTGAGAA 1340 |||||||||| || |||||||||||||||||||| |||||| Sbjct 1270 ACGAAACAGTTCGACTTGAATGGTTTCAGCTGGAACTGAGAA 1311 > AT5G18245.1 | Symbols: | other RNA | chr5:6028285-6033231 FORWARD LENGTH=2323 Length=2323 Score = 745 bits (403), Expect = 0.0 Identities = 521/573 (91%), Gaps = 28/573 (5%) Strand=Plus/Minus Query 557 GAACTTGCCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTTCAGAGAAGGCTACACGA 616 |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 843 GAACTTACCCATAAGTGATGCCCTTCAAATGCAAATAGAGGTCCAGAGACGGCTACACGA 784 Query 617 GCAACTTGAGGTACAGCGACATTTGCAGCTCAGGATAGAGGCTCAAGGAAAGTACT-TGC 675 ||||||| | || | || | | || ||| | || ||||| ||| Sbjct 783 GCAACTT---G---AG-G-TATCT--A--TC---ATATA--CT--------GTACTCTGC 749 Query 676 AATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGA 735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 748 AATCGATTCTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTAGGTGCAGCTGGGA 689 Query 736 TTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGAATATCCAG 795 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 688 TTGAAGCAACAAAAGCTCAACTCTCAGAATTAGTATCTAAAGTATCAGCAGACTATCCAG 629 Query 796 ACTCTAGTTTCCTAGAACCGAAAGAACTCCAGAATCTACGCCATCAACAGATGCAAACAG 855 ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| | Sbjct 628 ACTCTAGTTTCCTCGAACCGAAAGAACTGCAGAATCTACACCATCAACAGATGCAAAAAA 569 Query 856 CCTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAAAC-CAGAAA 914 | ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 568 CGTATCCACCTAACTCCTCCCTGGACAGTTGCCTAACCTCAAGTGAAGGAA-CTCAGAAA 510 Query 915 GCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATCGGAGATTCAACTTCA 974 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 509 GCCCCAAAGATGCTTGACAACAGACTGGGATTAAGAACATATATTGGAGATTCAACTTCA 450 Query 975 GAGCAGAAAGAGATAATGGAAGAACCATTCTTCCATCGAATGGAGCTCACATGGGCAGAA 1034 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 449 GAGCAGAAAGAGATAATGGAAGAGCCATTCTTCCATAGAATGGAGCTCACATGGGCAGAA 390 Query 1035 GAAGAAAGCCTCAGAGAGAGTAACAATAGGCCATATCTTTCGACAATGGCTAACAACACA 1094 ||||||||||||||||||| | |||| |||||||||||||| ||||||| ||||||| || Sbjct 389 GAAGAAAGCCTCAGAGAGAATCACAACAGGCCATATCTTTCAACAATGGTTAACAACGCA 330 Query 1095 GAACCGAGAATCTCGTCATCAAGAAGAAGCCCT 1127 ||||||||||||||||| ||||||||||| ||| Sbjct 329 GAACCGAGAATCTCGTCTTCAAGAAGAAGTCCT 297 Score = 348 bits (188), Expect = 1e-94 Identities = 207/216 (96%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 122 CAGACTTATGTATTACCAAAACCAGCACCAAGGAAAGAGCATCCTCTCTTCATCGAGAAT 181 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1731 CAGACTTATGTATTACCACAACCAGCACCAAGGAAAGAGCATCCTCTCTTCATCGAGAAT 1672 Query 182 GCCCA-TTCATTCTGAAAGGAATCCGTTCCTCAGGGGAAATGGCACAGGAGATTCTGGAC 240 ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 1671 GCCCATTTC-TTCTGAAAGGCATCCGTTCCTCAGAGGAAATGGCACAGGAGATTCTGGAC 1613 Query 241 TCATCCTCTCAACTGATGCAAAGCCAAGACTAAAATGGACTCCAGATCTTCACGAGAGAT 300 |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1612 TCATTCTCTCCACTGATGCAAAGCCACGACTAAAATGGACTCCAGATCTTCACGAGAGAT 1553 Query 301 TTGTTGAAGCGGTCAATCAGCTTGGAGGAGGAGATA 336 |||||||||||||||| ||||||||||||||||||| Sbjct 1552 TTGTTGAAGCGGTCAACCAGCTTGGAGGAGGAGATA 1517 Score = 230 bits (124), Expect = 4e-59 Identities = 205/239 (86%), Gaps = 26/239 (11%) Strand=Plus/Minus Query 1369 CCTTTTTATGATAATCACACAGGAAATGAAAAGCCTTTGATTTCCTTTGTTAGATTGAGA 1428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 299 CCTTTTTATGATAATCACACAGGAAATGAAAAGCCTTTGATTTCCTTTGTTAGCTTGAGG 240 Query 1429 GATTCGTC------------TA--A----AA--CAAAAGAGACAATCTTGTGCAAAAATG 1468 |||||||| || | || |||||||||| ||||||||||| |||| Sbjct 239 GATTCGTCTAAAAATTGAATTATTAGTCGAACTCAAAAGAGAC-ATCTTGTGCAACAATG 181 Query 1469 TGTAACACCATTAATTTGCGTAGTTATGATCTCatatatatatatataCAGATAAATTTA 1528 | ||||| |||||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct 180 TACAACACTATTAATTTGCGTAGTTATGATCTCAT-CATATA-A-ATACAGATAAATTTA 124 Query 1529 CTAACTTCATGGAAGATA-TCGAAATTCTTGAGAGAAGGACGTAAAGTTCCGTGCTTTT 1586 |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 123 CTAACTTCATGGAAGATACT-GAAATTCTTGAGAGAAGGACGTAAAGCTCCGTGCTTTT 66 Score = 148 bits (80), Expect = 1e-34 Identities = 84/86 (98%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 472 GTGTGATGACCATGGTAGAAGAAAACCCTCCTGAAGTAGACGAAAGTCACAGTGAGAGTT 531 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1002 GTGTGATGACCATGGTAGAAGAAAACCCCCCTGAAGTAGACGAAAGTCACAGTGAGAGTT 943 Query 532 TAAGCATTGGACCACAGCCGACCATG 557 ||||||||||||||||||||| |||| Sbjct 942 TAAGCATTGGACCACAGCCGAGCATG 917 Score = 137 bits (74), Expect = 3e-31 Identities = 76/77 (99%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 337 AGGCTACTCCTAAGACAATCATGAAAGTCATGGGTATTCCAGGCCTTACCTTATACCATC 396 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1428 AGGCTACTCCTAAGACAATCATGAAAGTCATGGGCATTCCAGGCCTTACCTTATACCATC 1369 Query 397 TCAAGAGTCATCTTCAG 413 ||||||||||||||||| Sbjct 1368 TCAAGAGTCATCTTCAG 1352 Score = 117 bits (63), Expect = 3e-25 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 411 CAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACA 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1169 CAGAAATATAGGCTAAGCAAGAATCTTAATGGACAAGCTAACAGCAGTTTAAACAAGACA 1110 Query 471 AGT 473 ||| Sbjct 1109 AGT 1107 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78363050745 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5