BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488945
Length=2316
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20360.1 | Symbols: Phox3 | Octicosapeptide/Phox/Bem1p (PB1)... 3456 0.0
> AT5G20360.1 | Symbols: Phox3 | Octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat (TPR)-containing
protein | chr5:6881619-6884630 REVERSE LENGTH=2628
Length=2628
Score = 3456 bits (1871), Expect = 0.0
Identities = 2137/2262 (94%), Gaps = 31/2262 (1%)
Strand=Plus/Plus
Query 66 TTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTG-AAACTTTAGATGACTGTG 124
|||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 189 TTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGG-TGAAAACTTTAGATGACTGTG 247
Query 125 TTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTG 184
||||||||||||||| ||| | |||||||||| ||||||| |||||||||||||| ||||
Sbjct 248 TTTCAAAGGTTGAAAATTTAGATGATTGTGTTCCAAAGGTGGAAACTTTAGATGATTGTG 307
Query 185 TTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAATCTTTAGATGATTGTG 244
|| ||||||| |||||||| | ||||||||||||| |||||||| |||||||||| ||||
Sbjct 308 TTCCAAAGGTGGAAACTTTAGATGATTGTGTTTCAGAGGTTGAAACTTTAGATGACTGTG 367
Query 245 TTTCAAAGGCACAAGGTTTGAAGGAAGAAGGGAACAAGTTGTTTCAGAAGAGAGATTATG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 TTTCAAAGGCACAAGGTTTGAAGGAAGAAGGGAACAAGTTGTTTCAGAAGAGAGATTATG 427
Query 305 ATGGTGCAATGTTCAAATATGGTGAAGCTATCAAGATACTTCCTAAGGATCATGTAGAGG 364
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 428 ATGGTGCAATGTTTAAATATGGTGAAGCAATCAAGATACTTCCTAAGGATCATGTAGAAG 487
Query 365 TGTCTCATGTTCGAGCTAATATGGCTTCTTGTTATATGCAATTGGAACCAGGCGAGTTTT 424
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 488 TGTCTCATGTTCGAGCTAATGTGGCTTCTTGTTATATGCAATTGGAACCAGGTGAGTTTG 547
Query 425 CGAAAGCGATTTATGAATGTGATTTAGCACTTAGTGTTACTCCTGATCATAGTAAAGCCT 484
| ||||| ||| |||||||||||||||| || ||||||||||||||||||| |||||| |
Sbjct 548 CCAAAGCCATTCATGAATGTGATTTAGCGCTAAGTGTTACTCCTGATCATAATAAAGCAT 607
Query 485 TGTTGAAGAGGGCAAGATGTTATGAGGCATTGAATAAGTTGGATTTGGCTTTGAGAGATG 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 TGTTGAAGAGGGCAAGATGTTATGAGGCATTGAATAAGTTGGATTTGGCTTTGAGAGATG 667
Query 545 TTTGTATGGTTTCGAAACTGGATCCCAAGAATCCCATGGCATCCGAAATTGTTGACAAGC 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 668 TTTGTATGGTTTCGAAACTGGATCCCAAGAATCCCATGGCATCCGAAATTGTTGAGAAGC 727
Query 605 TTAAGAGAACTTTAGAGAGCAAAGGGTTAAGGGTTAATGATTCAGTGATAGAGTTGCCTC 664
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 728 TTAAGAGAACTTTAGAGAGCAAAGGGTTAAGGATTAATAATTCAGTGATAGAGTTGCCTC 787
Query 665 CAGATTATGTTGAACCTGTTGAG-GCTTCCCCTGCAGCACTGTGGGCTAAACTAGGCAA- 722
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 788 CAGATTATGTTGAACCTGTTG-GTGCTTCCCCTGCAGCACTGTGGGCTAAACTAGGCAAG 846
Query 723 GTCACGAGTGAAGAAAACCAAAAAGAGCAATCAAGTGCAAGAGAAGAGCGAGGGT---GG 779
|| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||
Sbjct 847 GT-ACGAGTGAAGAAAACTAAAAAGAGCAATCAAGTGGAAGAGAAGAGCGAGGGTGAGGG 905
Query 780 -GA--ATGTAGAGACTGAGAAGAAGAACATTGTTGCAGCTGAAAAAGGCAAGGAAAAAAT 836
|| |||||||| ||||||||||||||| |||| ||||||||||||||||||||| |
Sbjct 906 TGAGGATGTAGAGCCTGAGAAGAAGAACAATGTTTTAGCTGAAAAAGGCAAGGAAAAGA- 964
Query 837 TATCGATAAGCAGAGCaaaaaaaaTGGAAAAGGGAAACAGTTGGATAAGAGAAGTGATAT 896
| | | || | | ||| | |||||||||||||| |||||||||||||||||
Sbjct 965 T-T--A-AA--A-TG------AAA-GTAAAAGGGAAACAGTCGGATAAGAGAAGTGATAC 1010
Query 897 GAGCAAGGAAAAGGAAAAAGTGATAATTGAGGAGGAACTTCTGGTTGTAGGTGTAGAAGA 956
|||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1011 GAGCAAGGAACAGGAAAAAGTGATAATTGAGGAAGAACTTCTGGTTATAGGTGTAGAAGA 1070
Query 957 TGTAAACAAGGATGTGAAATTCGTATACTCTGACGACATAAGATTGGCTGAGTTGCCTAT 1016
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1071 TGTAAACAAGGATGTGAAATTCGTATACTCTGACGATATAAGATTGGCTGAGTTGCCTAT 1130
Query 1017 AAATTGCACTCTCTTTAAACTTAGGGAAGTTGTTCATGAGCGTTTCCCAAGCTTAAGAGC 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 AAATTGCACTCTCTTTAAACTTAGGGAAGTTGTTCATGAGCGTTTCCCAAGCTTAAGAGC 1190
Query 1077 AGTTCATATAAAGTACAGGGACCAAGAAGGAGATTTAGTGACAATCACAACAGATGAAGA 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 AGTTCATATAAAGTACAGGGACCAAGAAGGAGATTTAGTGACAATCACAACAGATGAAGA 1250
Query 1137 GCTAAGAATGAGTGAGGTGTCATCAAGGTCACAGGGCACTATGAGGTTCTATGTAGTGGA 1196
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 GTTAAGAATGAGTGAGGTGTCATCAAGGTCACAGGGCACTATGAGGTTCTATGTAGTGGA 1310
Query 1197 AGTTAGTCCTGAGCAGGATCCCTTTTTTGGAAGATTAGTTGAGATGAAGAAACTCAAAAT 1256
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1311 AGTTAGTCCTGAGCAGGATCCCTTTTTCGGAAGATTAGTTGAGATGAAGAAACTCAAAAT 1370
Query 1257 TACCGCTGATTCTTTTAAAGCAAAGGTATACGGAAGAGGTGGATGTAAAGTTGAAGATTG 1316
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1371 TACTGCTGATTCTTTTAAAGCAAAGGTAAACGGAAGAGGTGGATGTAAAGTTGAAGATTG 1430
Query 1317 GATGATTGAATTTGCTCAGCTTTTTAAGACCCAGGCCAGAATTGATTCTGATACATGCTT 1376
|||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1431 GATGATTGAATTTGCTCATCTTTTTAAGATCCAGGCCAGAATTGATTCTGATAGATGCTT 1490
Query 1377 GAATCTTCAAGAACTTGGGATGAAACTTAATTCAGAAGCTATGGAGGAGGTGGTAACCTC 1436
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1491 GAATCTTCAAGAACTTGGGATGAAACTTAATTCAGAAGCTATGGAGGAAGTGGTAACCTC 1550
Query 1437 CAATGCAGCTCAAGGTCCTTTTGACAGAGCGGCTCATCAATTCCAAGAAGTGGCAGCTCG 1496
| ||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct 1551 CGATGCAGCTCAAGGTCCTTTTGACAGGGCAGCTCAGCAATTCCAAGAAGTTGCAGCTCG 1610
Query 1497 ATCATTGTTAAAGTTGGGAAATGTGCACATGTCGGGGGCAAGGAAAAGGTTGAGCCTCCT 1556
|||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1611 ATCATTGTTAAACTTGGGATATGTGCACATGTCAGGGGCAAGGAAAAGGTTGAGCCTCCT 1670
Query 1557 ACATGGTGTTTCTGGAGAATCTGTTTCTGACCAAGTTAAAACTGCTTATGAATGCGCTCA 1616
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1671 ACAAGGTGTTTCTGGAGAATCTGTTTCTGAGCAAGTTAAAACTGCTTATGAATGCGCTAA 1730
Query 1617 GAAGGAGCACGCAAAAGCAAAAGAAAAGTACGAAGAGGCCATGAAAATAAAGCCGGAGTT 1676
||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1731 GAAGGAGCACGCAAATGCAAAAGAAAAGTATGAAGAGGCCATGAAAATAAAGCCAGAGTG 1790
Query 1677 TTTTGAAGTCTTTCTGGCGCTAGGTCTGCAGCAGTTTGAGGAAGCAAGACTTTCATGGTA 1736
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 TTTTGAAGTCTTTCTGGCACTAGGTCTGCAGCAGTTTGAGGAAGCAAGACTTTCATGGTA 1850
Query 1737 TTATGTACTTGTCTGTCACCTTGATTTGAAAACATGGCCATATGCAGATGTAGTACAGTT 1796
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1851 TTATGTACTTGTCAGTCACCTTGATTTGAAAACATGGCCGTATGCAGATGTAGTACAGTT 1910
Query 1797 TTATCAAAGCGCCGAAAGCAATATCAAAAAGTCTATGGAAGTGTT-GAAAAATTTGGAAA 1855
|||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1911 TTATCAAAGCGCAGAAAGCAATATCAAAAAGTCTATGGAAGTGTTAGAAAA-TTTGGAAA 1969
Query 1856 CCAAAAAGGAAAGTGAGACTTCTCAAGCAGGCAAAACCGATTGCCTGACACATGAAAAGG 1915
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1970 CCGGAAAGGAAAGTGAGCCTTCTCAAGCAGGCAAAACCGATTGCCTGACACATGAAAAGG 2029
Query 1916 -TGCCGGGTAGCTCAACTCAAAATAACCCAGCAAAAGAAGCAGGAAGGCTAAAGTCATGG 1974
| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2030 AT-CTGGGTAGCTCAACTCAAAATAACCCAGCAAAAGAAGCAGGAAGGCTAAAGTCGTGG 2088
Query 1975 ATAGATATTTTATTATGTACTGTACTTTATGAGAAATCAATCATGGAGTACAAACTTGAC 2034
|||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 2089 ATAGATATTTTATTGTGTGCTGTACTTTATGAGAGATCAATCATGGAGTACAAACTTGAC 2148
Query 2035 CAACCATTCTGGAGAGAGAGTTTAGAAGCTGCAACGGAGAAATTTGAGTTAGCTGGAACT 2094
||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2149 CAACCGTTCTGGCGAGAGAGTTTAGAAGCTGCAATGGAGAAATTTGAGTTAGCTGGAACT 2208
Query 2095 TGTAGGGATGATGTTGTTGCGATAATAAGTGAAGATTCTGTGGCAGGCAATACATTACGA 2154
|||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2209 TGTAAGGATGATGTTGTTGAGATAATAAGTGAAGATTATGTGGCAGGCAATACATTACGA 2268
Query 2155 GATCTAAGGATTCACGTGGAAGAGATAATACAGATTTTTAACGAGATATATGAAGCAAAA 2214
||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 2269 GATATAAGGTTTCACATGGAAGAGATTATACAGATTTTTGACGAGATATATGAAGCAAAA 2328
Query 2215 CATTGGACAAATGGGATCCCATCAGACCAGTTGGAAGAGATACTAAAGAGAAGGGCTGAA 2274
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2329 CATTGGACAAATGGGATCCCTTCAGACCAGTTGGAAGAGATACTAAAGAGAAGGGCTGAA 2388
Query 2275 AATATCTTTCATGTGTCAAATATAGCAATCCAACGTGGTTGA 2316
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 2389 AATATATTTCATGTGCCAAATATAGCAATCCAACGTGGTTGA 2430
Score = 353 bits (191), Expect = 4e-96
Identities = 237/258 (92%), Gaps = 7/258 (3%)
Strand=Plus/Plus
Query 1 ATGGAGAAGCAAAATGA-GAGCAAATCTAC--A-GATGCTGAAACAAGCCAAAGTCAATT 56
||||||||||||||||| ||| | |||||| | ||||||||||||||||||||||||||
Sbjct 1 ATGGAGAAGCAAAATGAGGAG-ATATCTACAGATGATGCTGAAACAAGCCAAAGTCAATT 59
Query 57 AGTGGATGATTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGA 116
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 60 AGTGGATGATTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACCTTAGA 119
Query 117 TGACTGTGTTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGA 176
||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||
Sbjct 120 TGACTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGCGGAAACTTTAGC 179
Query 177 TGACTGTGTTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAT-CTTTAG 235
||| ||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||
Sbjct 180 TGATTGTGTTTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGT-GAAAACTTTAG 238
Query 236 ATGATTGTGTTTCAAAGG 253
|||| |||||||||||||
Sbjct 239 ATGACTGTGTTTCAAAGG 256
Score = 259 bits (140), Expect = 8e-68
Identities = 173/189 (92%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 66 TTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 125
|||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 99 TTCAAAGGTTGAAACCTTAGATGACTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 158
Query 126 TTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 185
|||||||| |||||||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct 159 TTCAAAGGCGGAAACTTTAGCTGATTGTGTTTCAAAGGTTGAAACTTTAGATGATTGTGT 218
Query 186 TTCAAAGGTTGAAA-CTTTTGTTGATTGTGTTTCAAAGGTTGAATCTTTAGATGATTGTG 244
||||||||| |||| |||| | ||| |||||||||||||||||| ||||||||||||||
Sbjct 219 TTCAAAGGT-GAAAACTTTAGATGACTGTGTTTCAAAGGTTGAAAATTTAGATGATTGTG 277
Query 245 TTTCAAAGG 253
|| ||||||
Sbjct 278 TTCCAAAGG 286
Score = 254 bits (137), Expect = 4e-66
Identities = 172/189 (91%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 66 TTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 125
|||| ||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||
Sbjct 129 TTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGCGGAAACTTTAGCTGATTGTGT 188
Query 126 TTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTG-AAACTTTAGATGACTGTG 184
|||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||
Sbjct 189 TTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGG-TGAAAACTTTAGATGACTGTG 247
Query 185 TTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAATCTTTAGATGATTGTG 244
||||||||||||||| ||| | |||||||||| ||||||| ||| |||||||||||||||
Sbjct 248 TTTCAAAGGTTGAAAATTTAGATGATTGTGTTCCAAAGGTGGAAACTTTAGATGATTGTG 307
Query 245 TTTCAAAGG 253
|| ||||||
Sbjct 308 TTCCAAAGG 316
Score = 237 bits (128), Expect = 4e-61
Identities = 148/158 (94%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 96 TTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGTTGAAACTTTTGTTGATTGTGT 155
|||||||||||||||||||||||| |||||||||||||||||||| || | ||| |||||
Sbjct 69 TTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACCTTAGATGACTGTGT 128
Query 156 TTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGTTGAAACTTTTGTTGATTGTGT 215
|||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct 129 TTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGCGGAAACTTTAGCTGATTGTGT 188
Query 216 TTCAAAGGTTGAATCTTTAGATGATTGTGTTTCAAAGG 253
||||||||||||| ||||||||||||||||||||||||
Sbjct 189 TTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGG 226
Score = 237 bits (128), Expect = 4e-61
Identities = 169/189 (89%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 66 TTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 125
|||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 159 TTCAAAGGCGGAAACTTTAGCTGATTGTGTTTCAAAGGTTGAAACTTTAGATGATTGTGT 218
Query 126 TTCAAAGGTTGAAA-CTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTG 184
||||||||| |||| |||| | ||| ||||||||||||||||||| ||||||||| ||||
Sbjct 219 TTCAAAGGT-GAAAACTTTAGATGACTGTGTTTCAAAGGTTGAAAATTTAGATGATTGTG 277
Query 185 TTTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAATCTTTAGATGATTGTG 244
|| ||||||| |||||||| | |||||||||| ||||||| ||| |||||||||||||||
Sbjct 278 TTCCAAAGGTGGAAACTTTAGATGATTGTGTTCCAAAGGTGGAAACTTTAGATGATTGTG 337
Query 245 TTTCAAAGG 253
||||| |||
Sbjct 338 TTTCAGAGG 346
Score = 182 bits (98), Expect = 2e-44
Identities = 118/128 (92%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 126 TTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 185
|||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||
Sbjct 69 TTCAAAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACCTTAGATGACTGTGT 128
Query 186 TTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAATCTTTAGATGATTGTGT 245
|||||||||||||||||| | ||| ||||||||||||| ||| |||||| |||||||||
Sbjct 129 TTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAAAGGCGGAAACTTTAGCTGATTGTGT 188
Query 246 TTCAAAGG 253
||||||||
Sbjct 189 TTCAAAGG 196
Score = 182 bits (98), Expect = 2e-44
Identities = 118/128 (92%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 66 TTCAGAGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 125
|||| ||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct 249 TTCAAAGGTTGAAAATTTAGATGATTGTGTTCCAAAGGTGGAAACTTTAGATGATTGTGT 308
Query 126 TTCAAAGGTTGAAACTTTTGTTGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGT 185
| ||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||||
Sbjct 309 TCCAAAGGTGGAAACTTTAGATGATTGTGTTTCAGAGGTTGAAACTTTAGATGACTGTGT 368
Query 186 TTCAAAGG 193
||||||||
Sbjct 369 TTCAAAGG 376
Score = 106 bits (57), Expect = 1e-21
Identities = 61/63 (97%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 71 AGGTTGAAACTTTAGATGATTGTGTTTCAAAGGTTGAAACTTTAGATGACTGTGTTTCAA 130
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 314 AGGTGGAAACTTTAGATGATTGTGTTTCAGAGGTTGAAACTTTAGATGACTGTGTTTCAA 373
Query 131 AGG 133
|||
Sbjct 374 AGG 376
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114959248050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5