BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489021 Length=1930 Score E Sequences producing significant alignments: (Bits) Value AT5G21105.1 | Symbols: | Plant L-ascorbate oxidase | chr5:7172... 2710 0.0 AT5G21100.1 | Symbols: | Plant L-ascorbate oxidase | chr5:7168... 987 0.0 > AT5G21105.1 | Symbols: | Plant L-ascorbate oxidase | chr5:7172687-7177841 FORWARD LENGTH=2239 Length=2239 Score = 2710 bits (1467), Expect = 0.0 Identities = 1718/1836 (94%), Gaps = 30/1836 (2%) Strand=Plus/Plus Query 1 ATGGTTGTGTGGTGGATA--G-TGGTGGTGGCTGTCTTGACTCACACGGCGTCTGCCACC 57 |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct 89 ATGGGTGTGTGGTGGATAGTGCTGGTGGTGGCTGTCTTGACTCACACGGCGTCTGCCGCC 148 Query 58 GTGAGAGAGTATGATTGGGAGGTTGAGTACAAGTTTTGG-CAGCCGGACTGCAAAGAAGG 116 |||||||| ||| |||||||||| |||||||||| |||| | ||||||||||||||| || Sbjct 149 GTGAGAGAATATCATTGGGAGGTGGAGTACAAGTATTGGTC-GCCGGACTGCAAAGAGGG 207 Query 117 TGCCGTCATGACCATCAACGGCCAGTTTCCTGGCCCCACCATAAAAGCCGTCGCCGGAGA 176 ||||| |||||| |||||||| |||||||||| ||||||||||||||| |||||||||| Sbjct 208 CGCCGTTATGACCGTCAACGGCGAGTTTCCTGGTCCCACCATAAAAGCCTTCGCCGGAGA 267 Query 177 CACCATCGTCGTTC-ATCTCACGAACAAACTCACCACCGAAGGCCTTGTCATCCATTGGC 235 ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 268 CACCATCGTCG-TCAATCTCACCAACAAACTCACCACCGAAGGCCTTGTCATCCATTGGC 326 Query 236 ATGGAATCCGTCAGTTGGGAAGTCCATGGGCAGATGGAGCAGCAGGAGTTACCCAATGTG 295 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 327 ATGGAATCCGTCAGTTCGGAAGTCCATGGGCAGATGGAGCAGCAGGAGTTACTCAATGCG 386 Query 296 CCATTAATCCTGGAGAGACGTTTACCTACAAATTCACTGTTGAGAAGCCGGGAACACATT 355 | ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct 387 CAATTAACCCTGGAGAGACTTTTACCTACAATTTCACTGTTGAAAAGCCGGGAACACATT 446 Query 356 TCTACCATGGACACTACGGCATGCAGAGATCAGCTGGGCTATACGGATCGTTGATTGTGG 415 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 TCTACCATGGACACTATGGCATGCAGAGATCAGCTGGGCTATACGGATCGTTGATTGTGG 506 Query 416 ACGTGGCTAAAGGACAGAGAGAGAGGTTGAGATACGATGGTGAGTTTAATCTCTTACTAA 475 |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 507 ACGTGGCTAAAGGAAAGAGCGAGAGATTGAGATACGATGGTGAGTTTAATCTCTTACTCA 566 Query 476 GTGACTGGTGGCATGAGCCTATTCCTTCCCAAGAACTCGGTCTTTCTTCCAAACCTATGC 535 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 567 GTGACTGGTGGCATGAGGCTATTCCCTCCCAAGAACTCGGTCTTTCTTCCAAACCTATGC 626 Query 536 GCTGGATCGGTGAAGCTCAGAGCATATTGATAAATGGAAGGGGACAATTCAATTGTTCAT 595 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 627 GCTGGATCGGTGAAGCTCAGAGCATATTGATAAATGGGAGGGGACAATTCAATTGTTCAT 686 Query 596 TGGCGGCGCAATTTAGCAACA-CA--TCATTACCAATGTGCACGTTTAAAGAAGGTGATC 652 | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 687 TAGCGGCGCAATTTAGCAACAACACATCATTACCAATGTGCACGTTTAAAGAAGGTGATC 746 Query 653 AGTGTGCACCACAGAAACTCAACGTGGAGCCTAACAAGACTTACCGAATCAGACTCGCCA 712 |||| || ||||||| |||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 747 AGTGCGCCCCACAGATACTCCACGTGGAGCCGAACAAGACTTACCGAATCAGACTCTCCA 806 Query 713 GCACCACCGCTCTTGCCTCCCTCAACTTGGCTGTTCAGGGACACAAGCTAGTGGTGGTAG 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 807 GCACCACCGCTCTTGCCTCCCTCAACTTGGCTGTTCAGGGACACAAGCTAGTGGTGGTCG 866 Query 773 AAGCCGACGGCAACTACATTACGCCGTTCATC-ACCGACGATATCGACATATACTCCGGC 831 ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct 867 AAGCCGACGGCAACTACATAACGCCGTTCA-CGACCGACGATATCGACATATACTCCGGC 925 Query 832 GAGAGCTATTCTGTTCTTCTCACCACCGATCAAGACCCATCACAAAACTACTACATCTCC 891 || ||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 926 GAAAGCTACTCCGTCCTTCTCACCACCGATCAAGACCCTTCACAAAACTATTACATCTCC 985 Query 892 GTCGGCGTCCGTGGTCGGAAACCAAACACAACACAAGCACTCTCCAT-TCTAAATTACGT 950 |||||||||||||| ||||||||||||||||| || |||||| | || | |||||||||| Sbjct 986 GTCGGCGTCCGTGGCCGGAAACCAAACACAACTCAGGCACTCACTATAT-TAAATTACGT 1044 Query 951 AACTGCCCCTGCTTCAAAACTCCCTTCTTCTCCTCCGCCGGTGACTCCACGGTGGGACGA 1010 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1045 AACTGCCCCTGCTTCAAAACTCCCTTCTTCTCCTCCACCGGTGACTCCACGGTGGGACGA 1104 Query 1011 TTTCGAACGAAGCAAAAATTTCTCCAAGAAGATCTTCTCAGCGATGGGATCTCCATCGCC 1070 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1105 TTTCGAACGAAGCAAAAATTTCTCTAAGAAGATCTTCTCAGCGATGGGATCACCATCGCC 1164 Query 1071 GCCGAAGAAATACAGAAAACGGTTGATTCTTCTCAACACTCAGAATCTAATCGACGGATA 1130 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1165 GCCGAAGAAATACAGAAAACGGTTGATTCTTCTCAACACACAGAATCTAATCGACGGATA 1224 Query 1131 CACGAAATGGGCTATTAACAATGTCTCTCTAGTGACTCCGGCAACGCCATATCTCGGTTC 1190 |||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 1225 CACGAAATGGGCGATCAACAACGTCTCTCTAGTGACTCCGGCAACGCCGTATCTCGGTTC 1284 Query 1191 GGTTAAATACAATTTGAAACTCGGGTTTAACCGGAAATCGCCGCCGAGGAGTTACCGTAT 1250 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1285 GGTTAAATACAACTTGAAACTCGGATTTAACCGGAAATCGCCGCCGAGGAGTTACCGTAT 1344 Query 1251 GGATTACGACATTATGAATCCACCGCCGTTTCCTAACACCACTACAGGAAACGGGATTTA 1310 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1345 GGATTACGATATTATGAATCCACCGCCGTTTCCTAACACCACTACAGGAAACGGAATATA 1404 Query 1311 CGTTTTCCCGTTTAATGTAACGGTCGACGTGATTATCCAAAACGCAAACGTTTTAAAAGG 1370 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1405 CGTTTTCCCGTTTAATGTAACGGTCGACGTGATTATCCAAAACGCTAACGTTTTAAAAGG 1464 Query 1371 TGTAGTCAGTGAGATTCATCCATGGCATCTTCACGGTCACGACTTCTGGGTTTTGGGTTA 1430 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1465 TATTGTTAGTGAGATTCATCCATGGCATCTTCACGGTCACGATTTCTGGGTTTTGGGTTA 1524 Query 1431 CGGTGATGGAAAATTTAAACCGGGAATTGATGAGAAGACGTATAATTTGAAGAACCCGCC 1490 |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1525 CGGTGACGGGAAATTTAAACCGGGAATTGATGAGAAGACGTATAATTTGAAGAATCCGCC 1584 Query 1491 ATTACGGAATACGGCGATTTTGTATCCGTATGGATGGACGGCGTTAAGGTTTGTAACGGA 1550 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 1585 GTTACGGAATACGGCGATTTTGTATCCGTATGGATGGACGGCGATAAGGTTTGTGACGGA 1644 Query 1551 TAATCCAGGGGTTTGGTTTTTTCATTGCCATATTGAACCGCATTTGCATATGGGTATGGG 1610 ||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct 1645 TAATCCAGGGGTTTGGTTTTTTCATTGTCACATTGAACCGCATTTGCATATGGGAATGGG 1704 Query 1611 TGTGGTTTTCGCGGAGGGATTGAACCGGATTGGTAAGATACCTGATGAGGCGTTGGGTTG 1670 ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct 1705 TGTGGTTTTCGCGGAGGGATTAAACCGTATTGGTAAGGTACCTGATGAGGCGTTGGGTTG 1764 Query 1671 TGGTTTAACCAAGCAATTCCTCATGAACCGGAACC--A-TA-ATT-A--A---T--GACG 1718 |||||||||||||||||| |||||||||||||||| | | ||| | | | |||| Sbjct 1765 TGGTTTAACCAAGCAATTTCTCATGAACCGGAACCGCAATTGATTTAGTAAGGTATGACG 1824 Query 1719 GCATTTGAGTGTGTGCTTTTCTGTTTTG-G-TTGTGTTCCGTATATTGTAAACCGAAGAT 1776 ||||||||||||| ||||| ||||||| | |||||||| |||| |||| |||||||||| Sbjct 1825 GCATTTGAGTGTG--CTTTTTTGTTTTGTGGTTGTGTTCGGTATGTTGTCAACCGAAGAT 1882 Query 1777 TGGTTCATGTTATTGGTATAGTTGGTAAGTCGGTTA 1812 |||||||||||||||||||||||||| ||| ||||| Sbjct 1883 TGGTTCATGTTATTGGTATAGTTGGTTAGTTGGTTA 1918 > AT5G21100.1 | Symbols: | Plant L-ascorbate oxidase | chr5:7168184-7170928 FORWARD LENGTH=2059 Length=2059 Score = 987 bits (534), Expect = 0.0 Identities = 1316/1681 (78%), Gaps = 104/1681 (6%) Strand=Plus/Plus Query 73 TGGGAGGTTGAGTACAAGTTTTGGCAGCCGGACTGCAAAGAAGGTGCCGTCATGACCATC 132 |||||||||||||| |||| ||| |||||| || |||||||| ||| ||| ||||| Sbjct 210 TGGGAGGTTGAGTATAAGTACTGGTGGCCGGATTGTAAAGAAGGAATCGTTATGGCCATC 269 Query 133 AACGGCCAGTTTCCTGGCCCCACCATAAAAGCCGTCGCCGGAGACACCATCGTCGTTCAT 192 |||||||||||||| || || || ||| | || |||||||||||||| || | | || Sbjct 270 AACGGCCAGTTTCCAGGGCCAACGATAGACGCAGTCGCCGGAGACACGGTCATTATCCA- 328 Query 193 C-TC-ACGAACAAACTCACCACCGAAGGCCTTGTCATCCATTGGCATGGAATCCGTCAG- 249 | || | ||||||||| |||||||||| |||| ||||||||||| || || |||||| Sbjct 329 CGTCGTC-AACAAACTCTCCACCGAAGGTGTTGTTATCCATTGGCACGGCATACGTCAGA 387 Query 250 TTGGGAAGTCCATGGGCAGATGGAGCAGCAGGAGTTACCCAATGTGCC-ATTAATCCTGG 308 ||| | ||||||||| |||||||||||||| || ||||| ||| || ||||||||||| Sbjct 388 AAGGG-ACTCCATGGGCTGATGGAGCAGCAGGTGTGACCCAGTGT-CCTATTAATCCTGG 445 Query 309 AGAGACGTTT-ACCTACAAATTCACTGTTGAGAAGCCGGGAACACATTTCTACCATGGAC 367 ||||| ||| || ||||| |||| ||| || ||| |||||||||||||||||||||||| Sbjct 446 CGAGAC-TTTCACTTACAAGTTCATTGTCGATAAGGCGGGAACACATTTCTACCATGGAC 504 Query 368 ACTACGGCATGCAGAGATCAGCTGGG-CTATACGG-ATCGTTGATTGTGGACGTGGCTAA 425 ||||||| ||||| |||||| | ||| |||||||| || ||| || || | | | Sbjct 505 ACTACGGAATGCAAAGATCATC-GGGACTATACGGAAT-GTTAATAGT--A---AGAT-C 556 Query 426 AGGACAGAGAGAGAGGTTGAGATACGATGGTGAGTTTAATCTCTTACTAAGTGACTGGTG 485 | || | ||||||||| | |||||||| ||||| |||||||| || ||||||||||| Sbjct 557 A--CCA-AAAGAGAGGTTAATTTACGATGGAGAGTTCAATCTCTTGCTCAGTGACTGGTG 613 Query 486 GCA--TGAGCCTATTC-CTTCCCAAGAACTCGGTCTTTCTTC-CAAACCTATGCGCTGGA 541 ||| || | |||| | | |||||||||| ||||||||| | |||||||| |||| Sbjct 614 GCACCAAAG-C-ATTCAC-GCGCAAGAACTCGCTCTTTCTTCTC-GTCCTATGCGTTGGA 669 Query 542 TCGGTGAAGCTCAGAGCATATTGATAAATGGAAGGGGACAATTCAATTGTTCATTGGCGG 601 |||||||| |||| ||| | ||||| |||||||| ||||| |||||||||||| || | Sbjct 670 TCGGTGAACCTCAAAGCTTGTTGATCAATGGAAGAGGACAGTTCAATTGTTCACAAGCAG 729 Query 602 CGCAATTTAGCAACA-CATCATTA-CCA-ATG--TGCACGTTTAAAGAAGGTGATCAGTG 656 || | |||| ||| | | | | | ||| ||||||||||||||| ||||||||| Sbjct 730 CGTATTTTAACAA-AGGAGGA-GAGAAAGATGTATGCACGTTTAAAGAAAATGATCAGTG 787 Query 657 TGCACCACAGAAACTCAAC--GTGGAGCCTAACAAGACT-TACCG-AATCAGACTCGCCA 712 |||||| | |||||| | || || || || ||| | ||||| || || |||| | Sbjct 788 TGCACCTC--AAACTCTTCGAGTCGAACCCAA-TAGAGTGTACCGTCTTC-GAATCGCTA 843 Query 713 GCACCACCGCTCTTGCCTCCCTCAACTTGGCTGTTCAGGGACACAAGCTAGTGGTGGTAG 772 |||| || |||||||| |||||||||||||||||||| |||||| |||| ||||| || | Sbjct 844 GCACAACTGCTCTTGCTTCCCTCAACTTGGCTGTTCAAGGACACCAGCTGGTGGTTGTTG 903 Query 773 AAGCCGACGGCAACTACATTACGCCGTTCATCACCGACGATATCGACATATACTCCGGCG 832 |||| |||||||||||| | | ||||||| | | |||| || ||| | || ||||||| Sbjct 904 AAGCTGACGGCAACTACGTCGCACCGTTCACCGTCAACGACATTGACGTTTATTCCGGCG 963 Query 833 AGAGC-TATTCTGTTCTTCTCACCACCGATCAAG-AC--CCATCACAA-AACTACTACAT 887 | | | ||||||||||| || | ||| | | | || |||||| || || |||| || Sbjct 964 A-AACTTATTCTGTTCTCCTTAAAACC-A--ACGCACTTCCATCA-AAGAAGTACTGGAT 1018 Query 888 CTCCGTCGGCGTCCGTGGTCG-GAAACCAAACACAACACAAGCACTCTCCATTCTAAATT 946 |||||||||||| ||||| || ||| ||||| || | ||||||||| || | |||||| Sbjct 1019 CTCCGTCGGCGTTCGTGGCCGAGAACCCAAA-ACTCCTCAAGCACTCACCGTGATAAATT 1077 Query 947 ACG-TAACTGCCCCTGCTTCAAAACTCCCTTCTTC-TCCTCCGCCGGTGACTCCACGGTG 1004 ||| | | |||| ||| || || ||| || || ||| || |||||||||||| || Sbjct 1078 ACGTTGA-TGCCACTGAGTC---ACGCCCATC-TCATCCACCACCGGTGACTCCAATCTG 1132 Query 1005 GGACGATTTC-GAACGAAGCAAAAATTTCTCCAAGAAGATCTTCTCAGCGATGGGATCTC 1063 | |||| | || || ||||||| ||||| |||||||||||| | || | |||| || Sbjct 1133 GAACGA-CACAGATCGGAGCAAAAGCTTCTCGAAGAAGATCTTCGCCGCTAAAGGATATC 1191 Query 1064 CATCGCCGCCGAAGAAATACAGA-AAACGGTTGATTCTTCTCAACACTCAGAATCTAAT- 1121 || |||||| |||||| || | | | | | || || |||||||| |||||||| | Sbjct 1192 CAAAACCGCCGGAGAAAT-CACATGACCAGCTAATCCTCCTCAACACACAGAATCT-CTA 1249 Query 1122 CGACGGA-TACACGAAATGGGCTATTAACAATGTCTC-TCTAGTGAC-T-CCGGCAACGC 1177 ||| || |||||||||||| | || ||||| ||||| | || | | | |||| |||| Sbjct 1250 CGA-AGATTACACGAAATGGTCAATCAACAACGTCTCAT-TA-T-CCGTACCGGTGACGC 1305 Query 1178 CATATCTCGGTTCGGTTAAATACAATTTGAAACTCGG-GTTTAACCGGAAATCGCCGCCG 1236 | || ||||| || ||| |||| ||| ||| |||| || | |||||||||| || Sbjct 1306 CGTACCTCGGATCAATTAGATACGGTTT-AAAATCGGCGTACGATTTGAAATCGCCGGCG 1364 Query 1237 -AGGAGTTACCGTATGG---ATTACGACATTATGAATCCACCGCCGTTTCCTAACACCAC 1292 || ||||| ||||| ||||||| || ||||| || |||||| ||| ||||| || Sbjct 1365 AAGAAGTTA-ATTATGGATAATTACGATATCATGAAACCGCCGCCGAATCCAAACACAAC 1423 Query 1293 TACAGGAAACGGGATTTACGTTTTCCCGTTT--AAT-GTAACGGTCGACGTGATTATCCA 1349 | ||| | |||||||||| |||| ||||| ||| || | |||||||||||| | || Sbjct 1424 GAAAGGTAGCGGGATTTACAATTTCGCGTTTGGAATCGT--C-GTCGACGTGATTCTTCA 1480 Query 1350 AAACGCAAACGTTTTAAAAGGTGTAG-TCAGTGAGATTCATCCATGGCATCTTCACGGTC 1408 |||||| || |||||||||||||| | | |||||||||||||| |||||| |||| |||| Sbjct 1481 AAACGCTAATGTTTTAAAAGGTGT-GATTAGTGAGATTCATCCGTGGCATATTCATGGTC 1539 Query 1409 ACGACTTCTGGGTTTTGGGTTACGGTGATGGAAAATTTAAACCGGGAATTGATGAGAAGA 1468 | || ||||||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct 1540 ATGATTTCTGGGTTTTGGGTTACGGTGAAGGGAAATTTAAACCGGGGATTGATGAGAAGA 1599 Query 1469 CGTATAATTTGAAGAACCCGCCATTACGGAATACGGCGATTTTGTATCCGTATGGATGGA 1528 ||| |||||||||||| ||||| ||||||||||||| | | |||||||||| |||||||| Sbjct 1600 CGTTTAATTTGAAGAATCCGCCGTTACGGAATACGGTGGTGTTGTATCCGTTTGGATGGA 1659 Query 1529 CGGCGTTAAGGTTTGTAACGGATAATCCAGGGGTTTGGTTTTTTCATTGCCATATTGAAC 1588 ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 1660 CGGCGATAAGGTTTGTGACGGATAATCCAGGGGTTTGGTTTTTTCATTGTCATATTGAAC 1719 Query 1589 CGCATTTGCATATGGGTATGGGTGTGGTTTTCGCGGAGGGATT-GAACCGGATTGGTAAG 1647 ||||||||||||||||||||||||||||||||| ||||||| | || ||||||||||||| Sbjct 1720 CGCATTTGCATATGGGTATGGGTGTGGTTTTCGTGGAGGGAGTAGA-CCGGATTGGTAAG 1778 Query 1648 AT--A----CCTGATGAGGCG-TTGGGTTGTGGTTTAACCAAGCAATTCCTCATGAACCG 1700 || | || ||||| ||| |||| |||||| ||||||| | ||| || |||||||| Sbjct 1779 ATGGAGATACCGGATGAAGCGCTTGG-TTGTGGATTAACCAGGAAATGGCTTATGAACCG 1837 Query 1701 G 1701 | Sbjct 1838 G 1838 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95581837680 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5