BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489058 Length=1524 Score E Sequences producing significant alignments: (Bits) Value AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 | chr5:73036... 2355 0.0 AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:1586... 1312 0.0 > AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 | chr5:7303622-7305797 REVERSE LENGTH=1565 Length=1565 Score = 2355 bits (1275), Expect = 0.0 Identities = 1412/1478 (96%), Gaps = 9/1478 (1%) Strand=Plus/Plus Query 54 TTAttttttttAGGGTTTTCGTAAG-A-AGAG-AGAAAACATGTTTGGAAGAGGACCTTC 110 ||||||||||||||||||||||||| | |||| | ||||||||||||||||||||||||| Sbjct 90 TTATTTTTTTTAGGGTTTTCGTAAGAACAGAGCAAAAAACATGTTTGGAAGAGGACCTTC 149 Query 111 AAGGAAGAGCGATAACACCAAGTTCTACGAGATCCTTGGTGTTCCTAAGACCGCATCACC 170 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 150 AAGGAAGAGCGATAACACAAAGTTCTACGAGATCCTTGGTGTTCCTAAGACCGCAGCACC 209 Query 171 GGAAGATCTCAAGAAAGCTTATAAGAAAGCCGCTATCAAAAACCATCCTGATAAGGGTGG 230 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 AGAAGATCTCAAGAAAGCTTATAAGAAAGCCGCTATCAAAAACCATCCTGATAAGGGTGG 269 Query 231 AGATCCCGAAAAGTTTAAAGAGCTAGCTCAGGCTTATGAAGTTCTT-AGTGATCCTGAGA 289 ||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||| Sbjct 270 TGATCCCGAAAAGTTTAAAGAGTTAGCACAGGCTTATGAAGTT-TTAAGTGATCCTGAGA 328 Query 290 AGCGTGAGATCTATGACCAATATGGGGAGGATGCACTCAAGGAGGGAATGGGTGGTGGAA 349 |||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct 329 AGCGTGAGATCTATGATCAATATGGGGAAGATGCACTCAAGGAAGGAATGGGTGGTGGAG 388 Query 350 GCGGTGGGCACGATCCGTTTGATATCTTCTCTTCCTTCTTTGGTGGTGGTGGAAACCCAT 409 | ||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||| Sbjct 389 GTGGTGGACACGATCCATTTGATATCTTCTCTTCCTTCTTTGGTAGTGGTGGACACCCAT 448 Query 410 TCGGAGGTCATAGCCGGAGAAGAAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCCCTGA 469 ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| Sbjct 449 TCGGAAGTCATAGCCGGGGAAGGAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCCTTGA 508 Query 470 AGGTTTCCTTAGAGGATGTTTATCTCGGAACAACAAAGAAGCTCTCACTTTCTAGGAAGG 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 AGGTTTCCTTAGAGGATGTTTATCTCGGAACAACAAAGAAGCTCTCACTTTCTAGGAAGG 568 Query 530 TTTTGTGCTCAAAGTGTAACGGCAAGGGTTCAAAGTCTGGAGCTTCAATGAAATGTGGTG 589 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 CTTTGTGCTCAAAGTGTAACGGCAAGGGTTCAAAGTCTGGAGCTTCAATGAAATGTGGTG 628 Query 590 GCTGTCAAGGTTCGGGAATGAAGGTCTCGATCAGGCAGGTTGGACCTGGAATGATTCAGC 649 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct 629 GCTGTCAAGGTTCGGGAATGAAGATCTCGATCAGGCAGTTTGGACCTGGAATGATGCAGC 688 Query 650 AGATGCAGCATGCTTGTAATGATTGCAAGGGCACAGGAGAGACCATCAATGATCGGGACA 709 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 689 AGGTGCAGCATGCTTGTAATGATTGCAAAGGCACAGGAGAGACCATCAATGATCGGGACA 748 Query 710 GGTGTCCACAATGCAAAGCAGAGAAGGTTGTTTCCGAGAAGAAGGTGCTTGAAGTAAATG 769 |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| Sbjct 749 GGTGTCCACAATGCAAAGGAGAGAAGGTTGTCTCTGAGAAGAAGGTGCTTGAAGTAAATG 808 Query 770 TGGAGAAGGGAATGCAACACAATCAGAAGATCACGTTCAATGGACAAGCAGATGAAGCGC 829 |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct 809 TGGAGAAGGGAATGCAACACAATCAGAAGATCACATTCAGTGGACAAGCCGATGAAGCGC 868 Query 830 CTGATACTGTTACCGGAGATATAGTGTTCGTCATTCAGCAGAAGGAGCACCCAAAGTTCA 889 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 869 CTGATACTGTCACCGGAGATATAGTGTTTGTCATTCAGCAGAAGGAGCACCCAAAGTTCA 928 Query 890 AAAGAAAGGGGGATGATCTCTTTGTGGAGCACACCCTCTCTCTAACCGAGGCCTTGTGTG 949 |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 929 AAAGAAAGGGTGAGGATCTCTTTGTGGAGCACACCATCTCTCTAACCGAGGCCTTGTGTG 988 Query 950 GCTTCCAGTTTGTTTTGACCCATTTGGACAAAAGGCAGCTTCTCATCAAATCCAATCCCG 1009 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 989 GCTTCCAGTTTGTCTTGACCCATTTGGACAAAAGACAGCTTCTCATCAAATCCAAGCCCG 1048 Query 1010 GAGAGGTCGTCAAACCTGATTCATACAAGGCGATAAGTGATGAGGGAATGCCAATATACC 1069 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1049 GAGAGGTCGTCAAACCTGATTCATACAAGGCGATAAGTGATGAGGGAATGCCAATATACC 1108 Query 1070 AAAGGCCGTTCATGAAGGGTAAGCTATACATCCACTTCACTGTTGAGTTCCCGGATTCGC 1129 ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||| Sbjct 1109 AAAGGCCGTTCATGAAGGGTAAGCTATACATTCACTTCACGGTTGAATTCCCGGAATCGC 1168 Query 1130 TGAGCCCAGATCAGACAAAGGCCATTGAAGCAGTTTTGCCAAAGCCGACCAAGGCAGCTA 1189 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1169 TGAGCCCGGATCAGACAAAGGCCATTGAAGCAGTTTTGCCAAAGCCAACCAAGGCAGCTA 1228 Query 1190 TAAGTGATATGGAAATAGACGAGTGCGAAGAGACGACTCTGCATGATGTGAACATTGAGG 1249 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1229 TAAGCGATATGGAAATAGACGACTGCGAAGAGACGACTCTGCATGATGTGAACATTGAGG 1288 Query 1250 ATGAGATGAAAAGGAAGGCGCAAGCTCAAAGAGAGGCTTATGATGACGATGAGGATGAAC 1309 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 1289 ATGAGATGAAAAGGAAGGCGCAAGCTCAAAGAGAGGCTTATGATGACGATGAGGAAGATC 1348 Query 1310 ACCCAGGCGGTGCTCAGCGTGTGCAATGTGCCCAGCAGTGATCCACATGCGCATCTTAGT 1369 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1349 ACCCAGGCGGTGCTCAGCGTGTGCAATGTGCCCAGCAGTGATCAACATGCGCATCTTAGT 1408 Query 1370 GATCCCCAACAtttgcttct-tcttttctctttttcgttgtattatttttgggtcttttt 1428 |||| |||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct 1409 GATCTCCAATATTTGCTTCTGTCTTTTCTCCTTTTCATTGTATTATTTTTGGGTCTTTTT 1468 Query 1429 atagactttgCCAATTCAGTGGGAAGAACCTCGTCCTAATTCAAAATCCTTATCA-AC-A 1486 ||||||||||||||||||||||||||||||||||||||||||||| ||||| | | || | Sbjct 1469 ATAGACTTTGCCAATTCAGTGGGAAGAACCTCGTCCTAATTCAAA-TCCTTGTTACACCA 1527 Query 1487 ttttttttGGTTTGAGAAATAAACTTGTAGTTCTTGAG 1524 |||||||||||||||||||||||||||||||||||||| Sbjct 1528 TTTTTTTTGGTTTGAGAAATAAACTTGTAGTTCTTGAG 1565 > AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15868794-15871256 REVERSE LENGTH=1781 Length=1781 Score = 1312 bits (710), Expect = 0.0 Identities = 1116/1308 (85%), Gaps = 43/1308 (3%) Strand=Plus/Plus Query 64 TAGGGTTTTCGTAAGAA-GAGAGAAAACATGTTTGGAAGAGGACCTTC-AAGGAAGAGCG 121 |||||||||||| | || | | ||||| ||||| || |||||||| || || |||||||| Sbjct 171 TAGGGTTTTCGTTACAACG-GCGAAAAGATGTTCGGTAGAGGACCCTCGAA-GAAGAGCG 228 Query 122 ATAACACCAAGTTCTACGAGATCCTT-GGTGTTCCTAAGACCGCATCACCGGAAGATCTC 180 | ||||| |||||||||||||| ||| ||||||||||||| ||| ||||| ||||||||| Sbjct 229 ACAACACTAAGTTCTACGAGAT-CTTAGGTGTTCCTAAGAGCGCTTCACCAGAAGATCTC 287 Query 181 AAGAAAGCTTATAAGAAAGCCGCTATCAAAAACCATCCTGATAAGGGTGGAGATCCCGAA 240 ||||||||||| || |||||||||||||| || |||||||||||||||||||||||||| Sbjct 288 AAGAAAGCTTACAAAAAAGCCGCTATCAAGAATCATCCTGATAAGGGTGGAGATCCCGAG 347 Query 241 AAGTTTAAAGAGCTAGCTCAGGCTTATGAAGTTCTTAGTGATCCTGAGAAGCGTGAGATC 300 |||||||| ||| |||| || ||||||||||| |||||||| || |||||||||||||| Sbjct 348 AAGTTTAAGGAGTTAGCACAAGCTTATGAAGTGCTTAGTGACCCGGAGAAGCGTGAGATT 407 Query 301 TATGACCAATATGGGGAGGATGCACTCAAGGAGGGAATGGGTGGTGGAAGCGGTGGGCAC 360 |||||||| ||||| ||||||||||||||||| ||||||||||||||| | ||||| || Sbjct 408 TATGACCAGTATGGAGAGGATGCACTCAAGGAAGGAATGGGTGGTGGAGGAGGTGGACAT 467 Query 361 GATCCGTTTGATATCTTCTCTTCCTTCTTTGGTGGTGGTGGAAACCCATTCGGAGGTCAT 420 ||||| |||||||| ||||| |||||| || |||||| || ||| || |||||| || Sbjct 468 GATCCATTTGATATTTTCTCATCCTTC-TT--TGGTGGAGG---CCCCTTTGGAGGTAAT 521 Query 421 ---AGCCGG-AGAAGAAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCCCTGAAGGTTTC 476 |||||| | ||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct 522 ACCAGCCGGCA-AAGGAGGCAGAGGCGTGGTGAGGATGTTGTTCATCCCTTGAAGGTATC 580 Query 477 -CTTAGAGGATGTTTATCTCGGAACAACAAAGAAGCTCTCACTTTCTAGGAAGGTTTTGT 535 ||| |||||||| || || || |||| |||||||| |||||||||||||| | | | | Sbjct 581 TCTT-GAGGATGTGTACCTTGGTACAATGAAGAAGCTTTCACTTTCTAGGAATGCTCTCT 639 Query 536 GCTCAAAGTGTAACGGCAAGGGTTCAAAGTCTGGAGCTTCAATGAAATGTGGTGGCTGTC 595 |||| ||||||||||| ||||| ||||| |||||||| || |||||||||| || |||| Sbjct 640 GCTCTAAGTGTAACGGAAAGGGATCAAAATCTGGAGCCTCCTTGAAATGTGGAGGGTGTC 699 Query 596 AAGGTTCGGGAATGAAGGTCTCGATCAGGCAGGTTGGACCTGGAATGATTCAGCAGATGC 655 | || || || |||||||| || || |||||| |||||||||||||||| |||||||||| Sbjct 700 AGGGATCTGGTATGAAGGTGTCTATTAGGCAGCTTGGACCTGGAATGATCCAGCAGATGC 759 Query 656 AGCATGCTTGTAATGATTGC-AAGGGCACAGGAGAGACCATCAATGATCGGGACAGGTGT 714 ||||||| |||||||| ||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 760 AGCATGCATGTAATGAATGCAAAGGG-ACAGGTGAGACCATCAATGATCGGGACAGGTGT 818 Query 715 CCACAATGCAAAGCAGAGAAGGTTGTTTCC-GAGAAGAAGGTGCTTGAAGTAAATGTGGA 773 ||||||||||||| ||| ||||| || || |||||||||||||||||||| |||||||| Sbjct 819 CCACAATGCAAAGGAGACAAGGTCATT-CCTGAGAAGAAGGTGCTTGAAGTGAATGTGGA 877 Query 774 GAAGGGAATGCAACACAATCAGAAGATCACGTTC-AATGGACAAGCAGATGAAGCGCCTG 832 ||||||||||||||||| |||||||||||| || || |||||||||||||||||||||| Sbjct 878 GAAGGGAATGCAACACAGTCAGAAGATCACATTTGAA-GGACAAGCAGATGAAGCGCCTG 936 Query 833 ATACTGTTACCGGAGATATAGTGTTCGTCATTCAGCAGAAGGAGCACCCAAAGTTCAAAA 892 | ||||| || |||||||||||||| ||| |||||||||| ||||||||||||||||| | Sbjct 937 ACACTGTCACTGGAGATATAGTGTTTGTCCTTCAGCAGAAAGAGCACCCAAAGTTCAAGA 996 Query 893 GAAAGGGGGATGATCTCTTTGTGGAGCACACCCTCTCTCTAACCGAGGCCTTGTGTGGCT 952 ||||||| || || ||||||||||||||||| || ||||||||||| || |||||||||| Sbjct 997 GAAAGGGAGAAGACCTCTTTGTGGAGCACACACTTTCTCTAACCGAAGCTTTGTGTGGCT 1056 Query 953 TCCAGTTTGTTTTGACCCATTTGGACAAAAGGCAG-CTTCTCATCAAATCCAATCCCGGA 1011 |||| |||||| |||| || ||||| || || |||||||| ||||| ||||| || Sbjct 1057 TCCAATTTGTTCTGACTCACTTGGATGGCAGA-AGTCTTCTCATTAAATCTAATCCTGGG 1115 Query 1012 GAGGTCGTCAAACCTGATTCATACAAGGCGATAAGTGATGAGGGAATGCCAATATACCAA 1071 |||||||| |||||||||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct 1116 GAGGTCGTGAAACCTGATTCATACAAGGCAATAAGCGATGAAGGAATGCCGATATACCAG 1175 Query 1072 AGGCCGTTCATGAAGGGTAAGCTATACATCCACTTCACTGTTGAGTTCCCGGATTCGCTG 1131 ||||| ||||||||||||||||| |||||||||||||| || ||||||||||| ||| || Sbjct 1176 AGGCCATTCATGAAGGGTAAGCTCTACATCCACTTCACAGTGGAGTTCCCGGACTCGTTG 1235 Query 1132 AGCCCAGATCAGAC-AAAGGCCATTG-AAGCAGTTTTGCCAAAGCCGACCAAGGCAGCT- 1188 |||||||||||||| |||| | | || |||| ||| | || |||||| | || ||||| Sbjct 1236 AGCCCAGATCAGACCAAAG-C-ACTGGAAGCTGTTCTACCTAAGCCGTC-AA--CAGCTC 1290 Query 1189 A-TA-AGTGATATGGAAATAGACGAGTGCGAAGAGACGACTCTGCATGATGTGAACATTG 1246 | | ||||| ||||| ||||| || ||||| ||||| || || || ||||| ||||||| Sbjct 1291 AGTTGAGTGACATGGAGATAGATGAATGCGAGGAGACCACGCTCCACGATGTCAACATTG 1350 Query 1247 AGGATGAGATGAAAAGGAAGGCGCAAGCTCAAAGAGAGGCTTATGATGA---CGATGAGG 1303 |||||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct 1351 AGGATGAGATGAGGAGGAAGGCACAAGCTCAAAGAGAGGCTTATGATGATGACGATGAAG 1410 Query 1304 ATGA--AC-ACCCAGGCGGTGCTCAGCGTGTGCAATGTGCCCAGCAGT 1348 |||| || | || || |||||||| | ||||||||||||||||||| Sbjct 1411 ATGATGACCATCCGGGTGGTGCTCAAAGGGTGCAATGTGCCCAGCAGT 1458 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75200416410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5