BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489095 Length=864 Score E Sequences producing significant alignments: (Bits) Value AT5G22390.1 | Symbols: | Protein of unknown function (DUF3049)... 1177 0.0 > AT5G22390.1 | Symbols: | Protein of unknown function (DUF3049) | chr5:7418116-7419249 REVERSE LENGTH=1134 Length=1134 Score = 1177 bits (637), Expect = 0.0 Identities = 809/885 (91%), Gaps = 39/885 (4%) Strand=Plus/Plus Query 1 ATGGCAGCCTATGGAAGCTTTCACCGAATATTCGATAACCCAAGACAAGACAACTCTCCA 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 ATGGCAGCTTATGGAAGCTTTCACCGAATATTCGATAACCCAAGACAAGACAACTCTCCA 318 Query 61 AAGTCTTTTCTTGATACTCTCTCCTCTTCCTCACCTTGGAACCCAAGCAAAGGCCTCCAC 120 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 319 AAGTCGTTTCTTGATACTCTCTCCTCTTCTTCACCTTGGAACCCAAGCAAAGGCCTCCAC 378 Query 121 GTCACCACCCACCACGACGAAACGCCGCCGCCGTTTACAGAGATATTCGGTGAGCTTCAT 180 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 379 GTCACAACCCACCACGACGAAACGCCACCGCCGTTTACAGAGATATTCGGTGAGCTTCAT 438 Query 181 TTCAGAGAATCATCCCATTCTTCTTACGAGAAAACCTCAGCGGAGAACAGCAGTCTCCAA 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 439 TTCAGAGAATCATCCCATTCTTCTTACGAGAAAACCTCAGCCGAGAACAGCAGTCTTCAG 498 Query 241 CTGTGTACGGAAGGTTTAGGGTCAGAGAGTTATTACGACTTGGAAGATGAAAAAGTCAAC 300 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 499 CTGTGTACGGAAGGTCTAGGGTCAGAGAGTTATTACGGCTTGGAAGATGAAAAAGTCAAC 558 Query 301 GTTAATGTCAACGGTAACGGGGAAGATCATGATGAAGAGATTATTGAAGTGAAGGGTAAA 360 | | ||| | | |||| || ||| ||||| || || ||||||||||||||| Sbjct 559 GGTGATG-----G-TGACGGTGATGAT---GATGA-GA--TT---GAAGTGAAGGGTAAA 603 Query 361 GATAACGGAAGCAACGATGAGGAG---TGGGAACCACGAAGGAAGGAACGGAAAGAGTAT 417 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 604 GATAACGGAAGCAACGATGAGGAGGAGTGGGAACCACGAAGGAAGGAACGGAAAGAGTAT 663 Query 418 CCTCCGGCGATGACTAGGATGAGCTTCAAGACGTATAGAAAAGAAGGGAGGCTTGTGTTG 477 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 664 CCTCCGGCGATGACTAGGATGAGCTTCAAGACTTATAGAAAAGAAGGGAGGCTTGTGTTG 723 Query 478 GAAGAAGTTAGGATTCCGAGGAGAGAGTTTCTTCGAGCAAGCCGCGAAGATGGTCGACTC 537 ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct 724 GAAGAAGTTAGGATTCCAAGGAGAGAGTTCCTTCGTGCAAGCCGCGAAGATGGTCGACTC 783 Query 538 AGGTTGAAGTTGGTTCAACCCGAGGACGACCATGACGAAGAGGAAGAAAATGAGAAAGAT 597 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 784 AGGTTGAAGTTGGTTCAACCTGAGGACGACCATGACGAAGAGGAAGAGAATGAGAAAGAT 843 Query 598 AAACATG---ACGATGATGAATAATTTT-T---T-------G--T---ATCCATTGTTCC 638 ||||||| |||| ||||||||||||| | | | | |||| ||||||| Sbjct 844 AAACATGTCGACGAGGATGAATAATTTTGTGAATTTTCATAGAATTGTATCCGTTGTTCC 903 Query 639 GCAAGAAAAATGTCAATTATGAATGTAAAAGCTTCTTTATGCGGGTTTTGTAGTTCAATC 698 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 904 GCAAGATAAATGTCAATTATGAATGTAAAAGCTTCTTTATGCGGGTTTTGTAGTTGAATC 963 Query 699 AAGCTTTTGTCGCTTAACCATTCTGCCGAGtttttttttttCATTTACAACTTCTCTACC 758 |||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct 964 TAGCTCTTGTCGCTTAATCATTCTGCCGAGTTCTTTTTTT-CATTTACAACTTCTCTACC 1022 Query 759 AAACTATCAATGGTCAATGGCAAGGAAATTAATTTA-TTTTGAGTAAGATATATTTGGTT 817 | |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct 1023 ATTCTATCAATGGGCAATGGCAAGGAAACTAATTTAGTTTTGAGTAAGATATAATTGGTT 1082 Query 818 TTGTTTAAAAAATTTGGAAAAATCTCTTTAAATATTAAAAGCCAA 862 ||||||||| | |||||||||| |||||||||||||||||||||| Sbjct 1083 TTGTTTAAAGATTTTGGAAAAACCTCTTTAAATATTAAAAGCCAA 1127 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42146449333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5