BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489232 Length=3091 Score E Sequences producing significant alignments: (Bits) Value AT5G23720.1 | Symbols: PHS1 | dual specificity protein phosphat... 4883 0.0 > AT5G23720.1 | Symbols: PHS1 | dual specificity protein phosphatase family protein | chr5:7998230-8002840 FORWARD LENGTH=3115 Length=3115 Score = 4883 bits (2644), Expect = 0.0 Identities = 2926/3064 (95%), Gaps = 12/3064 (0%) Strand=Plus/Plus Query 1 TTCCTCTTCTCAGATACAAAGCTGACATTTGAAGAAAAAGACATATTTCTAAAATTAAAC 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 4 TTCCTCTTCTCAGATACAAAGCTGACATTTGAAGAAAAAGAC--ATTTCTAAAATTAAA- 60 Query 61 TCTCAG-A-CGAAGCTTTTTCAATGGCGGATCCTGAGAAGAAGCGAGATCAATCATTTTC 118 ||| | | |||||||| |||||||||| ||||||||||||||||||||| ||||||| Sbjct 61 ---CAGAACCTAAGCTTTTGCAATGGCGGAACCTGAGAAGAAGCGAGATCAACCATTTTC 117 Query 119 TCAAGAGAAAGACGACGAGAAATATCTCTACCTTGGTCACGACGAGCACGAGTCTCCTCT 178 |||||| |||||||| |||||| |||| ||||||| |||||||||||||||||||||||| Sbjct 118 TCAAGAAAAAGACGAAGAGAAAGATCTATACCTTGTTCACGACGAGCACGAGTCTCCTCT 177 Query 179 TCCTCTCACCGTCACTTCTCGTGTTTTGTACATGTTAGGAGACATAGCATCTGGTCCAGC 238 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 178 TCCTCTCACCGTCACTTCTCGTGTTTTGTACATGTTAGGAGATATAGCATCTGGTCCAGC 237 Query 239 TCATAGGTTTACTCAATGGTTGGATTTAGTTCGTAAACGAAGTGCTACTTACGGATCCTC 298 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 TTATAGGTTTACTCAATGGTTGGATTTAGTTCGTAAACGAAGTGCTACTTACGGATCCTC 297 Query 299 TGGCTTCCCTCACCGCCTTCACCGCATCGATGATATGGTTACTAGTGCAGGAGAGGGGAA 358 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 298 TGGCTTCCCTCACCGCCTTCACCGCATCGATGATATGGTCACTAGTGCAGGAGAGAGGAA 357 Query 359 TATTGATCCAAAAAGTCCACCAAGTAAGCAGAGTTCAGAAATTAGTTTGTGGGAAAGGCT 418 || |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 358 TACTGATCCTAAAAGTCCACCAAGTAGGCAGAGTTCAGAGATTAGTTTGTGGGAAAGGCT 417 Query 419 TGGTAAAGCTTCTACTGTGGATATCGAATCGAGCTGTTTTTCGTGGAATATGTTGTCTTC 478 |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct 418 TGGTAAAGCTTCTACTGTGGATATTGATTCGAGCTGTTTTTCATGGAATATGTTGTCTTC 477 Query 479 ACTTCATCATACTGAGCATAGTAGTAGCACTGATCATTCTGAAGAGGACCAGAGTAAACC 538 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 478 ACTTCATCATACTGAACATAGTAGTAGCACTGATCATTCTGAAGAAGACCAGAGTAAACC 537 Query 539 ACTTGAGGTTACTGTGAATTCTGGGGGAGTTGTTTTCTTTGCCCTGTTCAACAGTTCCAG 598 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 538 ACTTGAGGTTACTGTGAATTCTGGAGGAGTTGTTTTCTTTGCCCTGTTCAATAGTTCCAG 597 Query 599 CTCTGAAGATGCTTCTCGTAAGGAAGAAGCAGCAGTTATAAAATTTGCATCATCGAGGAT 658 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 598 CTCTGAAGATGCCTCTCGTAAGGAAGAAGCAGCAGTTATTAAATTTGCATCATCGAGGAT 657 Query 659 GGCCACGCAATCAGAACGTCTAGGTTATGAGTTTTCCAAGTGGCTAGGGGTTCAGATTCC 718 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 658 GGCCACGCAATCAGAACGTCTAGGTTATGAGTTTTCCAAGTGGCTAGGGGTGCAGATTCC 717 Query 719 GCAGGCTAGAGTAATTCATAGCTGTAATCCTGAGTGGACACTGATCAAAGAAGCCACTGA 778 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 718 GCAGGCTAGAGTAATTCACAGCTGTAATCCTGAGTGGACACTGATCAAAGAAGCCACTGA 777 Query 779 AAAAGCACAAGCTAAAGCGACTTTGGAGGGAGACGAAGTTGGTGAAATGACATGTTCAGA 838 ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| Sbjct 778 AAAAGCACAAGCTAAAGCGACTTCGGAGGGGGACGAGGTTGGTGAAATGACATGTTCAGA 837 Query 839 ACTTCTGGAAGCCCTTGAGCTCAGCCGTTGTCTTCTCCTAATGAGTTATGTTCATGGATG 898 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 838 ACTTCTGGAAGCCCTTGAGCTCAGCCGTTGTCTTCTCTTAATGAGTTATGTTCATGGATG 897 Query 899 TCCAATGCTGGAGAGCATGAGTAGTTTTGAAACTGAAGAAAAAGCAGAGAGAGCTGCTGC 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 TCCAATGCTGGAGAGCATGAGTAGTTTTGAAACTGAAGAAAAAGCAGAGAGAGCTGCTGC 957 Query 959 AGCTCTAGGGAGAATCTTGGTGTTAGATCTAGTAATTAGGAACGAAGACAGATTACCTTG 1018 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 958 AGCTCTAGGGAGAATCTTGGTGTTAGATCTAGTAATTAGGAATGAAGACAGATTACCGTG 1017 Query 1019 TCGTCAGCTGAGATGGCGTGGCAACCCGGCAAATCTGTTATTGACAGACAGAATTGTGTC 1078 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1018 TCGTCAGCTGAGATGGCGTGGCAACCCGGCAAATCTGTTACTGACAGACAGAATTGTGTC 1077 Query 1079 TTCTACAAAACATCTTGAATGCTCATTTGAAGAAGCTTTTGATTCCGCCATTAAACGGTA 1138 |||| |||| |||| |||||| |||||||| |||||||||||||||||||| |||||||| Sbjct 1078 TTCTGCAAAGCATCATGAATGTTCATTTGATGAAGCTTTTGATTCCGCCATCAAACGGTA 1137 Query 1139 CCATCCAAAGGACTACAGATCCATTCAAAGGGAAAGAAGAGCTTCTTCTGTAGATAGCAG 1198 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1138 CCATCCAAAGGACTATAGATCCATTCAAAGGGAAAGAAGAGCTTCTTCCGTAGATAGCAG 1197 Query 1199 ATCCAGGCTGAGTATCAGTGATCAAATGTTGGTCTCACAGTCGTCTGGTTTTTCCGATAT 1258 ||||||| |||||||||||||||||||||||||||||||| | |||| |||||| ||||| Sbjct 1198 ATCCAGGTTGAGTATCAGTGATCAAATGTTGGTCTCACAGGCTTCTGATTTTTCTGATAT 1257 Query 1259 AACGGAATCACCTAAATCGTATGACACTGGTTTAATGAGTCCAATGTCTGATAGATCAGT 1318 |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1258 AACGGAATCACCTAGATCATATGATACTGGTTTAATGAGTCCAATGTCTGATAGATCAGT 1317 Query 1319 AGCTGCTGATTTTCACCTTGTTGCCATAGACTCGGGTGTTCCACGGCGGCCTCCTGCTGG 1378 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 AGCTGCCGATTTTCACCTCGTTGCCATAGACTCGGGTGTTCCACGGCGGCCTCCTGCTGG 1377 Query 1379 AAAACGGGCCAGCGACCAAGAAATTTATCCAAGATTAGTTGAGCTACTCCTCAATAGTAG 1438 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1378 AAAACGGGCAAGCGACCAAGAAATTTATCCAAGATTAGTTGAGTTACTCCTCAATAGTAG 1437 Query 1439 CCAATACTCTTCGAATTTGTTACATGAAATAACAGAAGGAAATTTAGGATATCCACAGGC 1498 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1438 CCAATATTCTTCGAATTTGTTACATGAAATAACAGAAGGAAGTTTAGGATATCCACAGGC 1497 Query 1499 AGAAGATGGTGAAGAAACATCTAATGTTCGATCTGTAGTAACACCAGTTGTACGTGAGTT 1558 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1498 AGAAGATGGTGAAGAAACATCTAATGTTCGATCTGTAGTAACACCAGTTGTACGCGAGTT 1557 Query 1559 CCGAAATGGTTTCCGTGCTGGTCTCAGGGATTTGCAAGAGTTTCACATCTTCCTTGTCAC 1618 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 TCGAAATGGTTTCCGAGCTGGTCTCAGGGATTTGCAAGAGTTTCACATCTTCCTTGTCAC 1617 Query 1619 CCTTCATCAGAAATTAGATGTGTTGCTTCGGGCATTTTTTAGTATGATGGACAAAACAAT 1678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 CCTTCATCAGAAATTAGATGTGTTGCTTCGGGCATTTTTTAGTATGATGGACAAAACAAT 1677 Query 1679 GTGTGCAGATTTTGACAGAGAAGATTTTTCTGTTCCTGAGTCACCTTCACAAACCCATGG 1738 |||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||||| Sbjct 1678 GTGTGCAGATTTTGACAGAGAAGACTTTGCTGTTCCTGAGTCACCTTCACATACTCATGG 1737 Query 1739 GCATGAGGTGAATCACTATCCATCTCCCTCAAAAGATCGGGTGCATAGTGATAACAGCTC 1798 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1738 GCATGAGGTGAATCATTATCCATCTCCCTCAAAAGATCGGGTGCCTAGTGATAACAGCTC 1797 Query 1799 TGATCACAGTGAGTCAGATATGCAAAAATCAGTTCCTAGGACACCAAATTCAGAAAACAA 1858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 TGATCACAGTGAGTCAGATATGCAAAAATCAGTTCCTAGGACACCAAATTCAGAAAACAA 1857 Query 1859 AGAAGATGCGAGTTCGCCTAAGTCACGTGAAAGTTGGCATGGAAGATCCAATAAAGGTGG 1918 |||||| | | ||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 1858 AGAAGACGGGTCTTCGCCTAAGTCACGTGAAAGTTGGCACGGAAGATCCGGTAAAGGTGG 1917 Query 1919 AGAATCTCTTAGCAGTCAGCGTTTGGCATCAAAGCTCCGCGACTTCCATAAGTTTGCTAA 1978 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || Sbjct 1918 AGAATCTCTTAGCAGTCAGCGTTTGGCAGCAAAGCTCCGTGACTTCCATAAGTTTGCAAA 1977 Query 1979 GGTTGATGCTGAGTCTAATAAAGAACTAGACCAGTGGAATGAAACACTGCGGAATGAAGT 2038 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1978 GGTTGATGCTGAGTCTAATAAAGAACTAGACCAGTGGAATGAAACACTGCGGAATGAAGT 2037 Query 2039 TATGAAACTCTGCCAAGAAAACGGTTTTAACACTGGtttttttGAGGGCAGTGATAATAA 2098 |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 2038 GATGAAACTTTGCCAAGAGAACGGTTTCAACACTGGTTTTTTTGAGGGCAGTGATAATAA 2097 Query 2099 CAGTTGCACAGATGCTTACGAGCTAAAGGTTAGACTTGAGCATATTCTTGAGAGGATATC 2158 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2098 CAGTTGCACAGATGCTTATGAGCTAAAGGTTAGACTTGAGCATATTCTTGAGAGGATATC 2157 Query 2159 ATTGATTTGCAAAGCTGCTAATACGGAGAAACCATCAATGATACAAGATAATCTTTTTAT 2218 ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 2158 ATTGATTAGCAAAGCTGCTAATACAGAGAAACCATCAATGATACAAGAAAATCTTTTTAT 2217 Query 2219 CGGGGGAGGATTGGCTGCAAGGTCGATTTACACTCTTCAGCATTTAGGTATAACTCATAT 2278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2218 CGGGGGAGGATTGGCTGCAAGGTCGATTTACACTCTTCAGCATTTAGGTATAACTCATGT 2277 Query 2279 TCTATGTTTGTGCGCTAATGAAATCGGTCAATCGGATACTCAATACCCGGATCTCTTCAA 2338 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2278 TCTATGTTTGTGCGCTAATGAAATCGGGCAATCGGATACTCAATACCCGGATCTCTTCGA 2337 Query 2339 GTACCAAAACTTCTCAATAACCGACGAAGAAGACTCAAAGATCGAGAGCATCTTTCAAGA 2398 |||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct 2338 GTACCAAAACTTCTCAATAACCGATGATGAAGACTCAAATATCGAGAGCATCTTTCAAGA 2397 Query 2399 AGCTCTCGATTTCATCAAGCATGGCGAAGAAACAGGTGGCAAGATTTTAGTTCATTGCTT 2458 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2398 AGCTCTCGATTTCATCAAGCATGGCGAAGAAACTGGTGGCAAGATTTTAGTTCATTGCTT 2457 Query 2459 CGAAGGTCGGAGTAGAAGCGCAACAGTAGTGCTTGCTTACCTAATGCTCCAAAAGAACCT 2518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2458 CGAAGGTCGGAGTAGAAGCGCAACAGTAGTGCTTGCTTACCTAATGCTCCAAAAGAAGCT 2517 Query 2519 AACACTATTAGAAGCATGGGGCAAACTGAGGAAAGTTCATAGACGAGCTCAACCAAACGA 2578 ||||| |||||||||||| |||||||||||||||||||||||||||||||||| || || Sbjct 2518 CACACTTTTAGAAGCATGGAGCAAACTGAGGAAAGTTCATAGACGAGCTCAACCGAATGA 2577 Query 2579 CGGATTTGCGCGGATCTTAATTAACCTCGACAAGAAATGTCACGGGAAAGTGTCAATGGA 2638 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 2578 TGGATTTGCGCGGATCTTAATAAACCTCGACAAGAAATGTCACGGGAAAGTATCAATGGA 2637 Query 2639 GTGGAGACAGAGGAAACCGACAATGAAAGTGTGTCCGGTTTGTGGTAAGAACGCAGGTCT 2698 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2638 GTGGAGACAGAGGAAACCGACAATGAAAGTGTGTCCGGTTTGTGGAAAGAACGCAGGTCT 2697 Query 2699 AAGCAGCAGTTCTCTGAAGCTACATCTCCAGAAATCTCACAGGAAACTGTCTTCGGGAAG 2758 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2698 AAGCAGCAGTTCTTTGAAGCTTCATCTCCAGAAATCTCACAGGAAACTGTCTTCGGGAAG 2757 Query 2759 TGTTGACAGTGCAATGAACATGGAGATTCAAAAGGCTTTGGAGGCTCTTAAACTCAGCAC 2818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2758 TGTTGACAGTGCAATGAACATGGAGATTCAAAAGGCTTTGGAGGCTCTTAAACTCAGCAC 2817 Query 2819 TGGCCGTGGCTCAAGCGCTAGCTCCAATTCTTTCCAATCTCATCCTGGTTAGAGATTCCG 2878 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 2818 TGGCCGTGGCTCAAGTGCTAGTTCCAATTCTTTCCAATCTCATCCTGGTTAGAGAGTCCG 2877 Query 2879 GTTTAGTTTTATCTTTGGTTTGTCCCGGTTAAAGTCTCT--AATCGAACATATaaaaaaa 2936 |||| ||||||||| |||||||||||||||||||||||| ||||| |||| | || | Sbjct 2878 GTTTGGTTTTATCTATGGTTTGTCCCGGTTAAAGTCTCTCTAATCGTACATCTCTGAACA 2937 Query 2937 aaaaaaaaCTGATCCGTTTGGTTTTGTTTTTTACTGTAACTATCTTTGTAATTGTATACC 2996 |||| | ||||| |||| |||||||||||||||||||| ||||||||| |||||||| Sbjct 2938 AAAACAT--TGATCTGTTTTGTTTTGTTTTTTACTGTAACGATCTTTGTACTTGTATACG 2995 Query 2997 CAACTAAATAAAAAGCCGAAAAGTTGAATACAAGTCACTGGAAAACGTCACAATAAGCTA 3056 ||| ||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||| Sbjct 2996 CAAGTAAATAAAAAGCCGAAAAGCTGAATAGAAGTCACTGGGAAACGTCATAATAAGCTA 3055 Query 3057 ATGT 3060 |||| Sbjct 3056 ATGT 3059 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 153711513352 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5