BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489339 Length=1391 Score E Sequences producing significant alignments: (Bits) Value AT5G24770.1 | Symbols: VSP2, ATVSP2 | vegetative storage protei... 1463 0.0 AT5G24780.1 | Symbols: VSP1, ATVSP1 | vegetative storage protei... 1086 0.0 > AT5G24770.1 | Symbols: VSP2, ATVSP2 | vegetative storage protein 2 | chr5:8500476-8502224 REVERSE LENGTH=1415 Length=1415 Score = 1463 bits (792), Expect = 0.0 Identities = 975/1060 (92%), Gaps = 25/1060 (2%) Strand=Plus/Plus Query 1 TTAAGCACACAGTCTCAACGTGCTCTAAAAACGAGTGGTTCTATGTAAGTGAAAAATATC 60 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 137 TTAAGCACACAATCTCAACGTGCACTAAAAACGAGTGG-----TGTAAGTGAAAAATATC 191 Query 61 GTCGATTATAAACATTATCGGACCAGTAGCATTTGTTGCACCAATCGAAAACACACACA- 119 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | Sbjct 192 GTCGATTATAAACATTATGGGACCAGTAGCATTTGTTGCACCAATCGAAAACAGACA-AG 250 Query 120 TATACTTATAGCCTCATTTCCCATCTGTCGTCATAAGTAACCA-TACT--T-ACCCCACC 175 | || ||| ||||||||| |||||| | || | ||| || | || | |||||||| Sbjct 251 CACACATATCTCCTCATTTCTCATCTGGCTTC-T---TAATCATTTCTCATAACCCCACC 306 Query 176 TCATTATAAATACCACCCTTTGTGTCACACAAATAAGCATCACAAACTAAACAATAAACC 235 |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct 307 TCATTATAAATACCACCCTTTGCGTCACACATATAAACATCACAAACTAAACAATAAACC 366 Query 236 ATATATACCACAAAAAACATGAAAATCCTCTCACTTTCACTTCTCTTGCTCTTGGCCGCT 295 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 ----ATACCATAAAAAACATGAAAATCCTCTCACTTTCACTTCTCTTGCTCTTGGCCGCT 422 Query 296 ACGGTCTCGGCATCCGTTCCAGAGCTCATCGAACTCGTCGAATCGAACACCATCTTTGGG 355 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 423 ACGGTCTCGGCATCCGTTCCAGGGCTCATCGAACTCGTCGATTCGAAAACCATCTTTGGG 482 Query 356 AACGAAGCCGAACTCTTAGAGAAAGAGAAACTTACCATCAACTAC-CACAACTGCAGAAG 414 |||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||| Sbjct 483 AACGTAGCCGAACTCTTAGAGAAAGAGAAACTTTCCATCAACTACGC-CAACTGCAGAAG 541 Query 415 CTGGCACCTTGGTGTTGAGACCTCTAACATCATAGACTTCGACACCGTGCCCGCAAATTG 474 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 542 CTGGCACCTTGGTGTTGAGACCTCTAACATCATAGACTTCGACACGGTGCCCGCAAATTG 601 Query 475 CAAAGACTATGTTGAAGACTACTTGATCACTTCCAAACAGTACCAAT-CTGACTCCAAAA 533 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 602 CAAAGACTATGTTGAAGACTACTTGATCACTTCCAAACAGTACCAATAC-GACTCCAAAA 660 Query 534 CGGTGTGCAAAGAGGCTTATTTCTACGCCAAAGGACTTGCCCTAAAGAACGATACCGTCA 593 | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 661 CCGTGTGCAAAGAGGCTTATTTCTATGCCAAAGGACTTGCCCTAAAGAACGACACCGTCA 720 Query 594 ATGTTTGGATCTTTGACCTAGACGACACTCTCCTCTCTAGTATCCCCTACTACGCCAAAT 653 |||||||||||||||||||||| || || |||||||||||||| ||||||||||| |||| Sbjct 721 ATGTTTGGATCTTTGACCTAGATGATACCCTCCTCTCTAGTATTCCCTACTACGCAAAAT 780 Query 654 ATGGATACGGGACACAGAAGACCGACCCGGGAGCATACTGGTTGTGGTTAGGGACCGGAG 713 |||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct 781 ATGGATACGGAACAGAGAAGACCGACCCGGGGGCGTACTGGTTGTGGTTAGGGACCGGAG 840 Query 714 CATCAACTCCCGGG-CTTCCGGAGACTTTGCTTCTATACCAAAACCTCTTAGAACTCGGG 772 ||||||| ||| || || |||||| | |||| ||| ||||||||| || |||| |||||| Sbjct 841 CATCAAC-CCCTGGACTCCCGGAGGCCTTGCATCTTTACCAAAACATCATAGAGCTCGGG 899 Query 773 ATTGAACCCATCATACTCAGTGACCGTTGGAAATTGTGGAAGAATGTCACTCTCGAGAAT 832 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 900 ATTGAACCCATCATACTCAGTGACCGTTGGAAGTTGTGGAAGAATGTCACTCTCGACAAT 959 Query 833 CTTGAGGCTGCTGGTGTGACCTACTGGAAGCATCTCATATTAAAGCCAAACGGTTCGAAA 892 || || |||||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct 960 CTCGAAGCTGCTGGCGTGACCTACTGGAAGCATCTCATATTGAAGCCTAATGGTTCGAAC 1019 Query 893 TTGAGGCAAGTGGTGTACAAGTCAAAGGTGAGGAAGAGCCTGGTGAAGAAAGGATACAAC 952 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1020 TTGAGGCAAGTGGTGTACAAGTCAAAGGTGAGGAAGAGTCTCGTGAAGAAAGGATACAAC 1079 Query 953 ATCGTTGGCAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATACTCCTGGAAGGGTT 1012 |||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 1080 ATCGTTGGCAATATCGGAGATCAATGGGCTGATTTGGTTGAGGATACCCCTGGGAGGGTT 1139 Query 1013 TTTAAGCTCCCAAATCCACTCTACTACGTACCTTCTTAAG 1052 |||||||||||||||||||||||||||||||||||||||| Sbjct 1140 TTTAAGCTCCCAAATCCACTCTACTACGTACCTTCTTAAG 1179 Score = 510 bits (276), Expect = 1e-143 Identities = 321/343 (94%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 1050 AAGTGGTGTACAAGTCAAAGGTGAGGAAGAGCCTGGTGAAGAAAGGATACAACATCGTTG 1109 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 1027 AAGTGGTGTACAAGTCAAAGGTGAGGAAGAGTCTCGTGAAGAAAGGATACAACATCGTTG 1086 Query 1110 GGAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATACTCCTGGAAGGGTCTTTAAGC 1169 | ||||| ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct 1087 GCAATATCGGAGATCAATGGGCTGATTTGGTTGAGGATACCCCTGGGAGGGTTTTTAAGC 1146 Query 1170 TCCCAAATCCACTCTACTACGTACCTTCTTAAGTATCTATGTTCATGGCTTTGTCCCCTT 1229 ||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||| Sbjct 1147 TCCCAAATCCACTCTACTACGTACCTTCTTAAGAATCTATCTTCATCGCATTGTCCCCTT 1206 Query 1230 GTATCCACTCCATATCTATGTC-TTTCCGTTTATCTTTATAGCCGTTTTGGCACCGCTGC 1288 |||| |||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct 1207 GTATACACTTCATATCTATGTCGTTT-CGTTTATCTTTGTAGCCGTTTTGGCACCGCTGC 1265 Query 1289 ATAAATAAAATGTCTATCCTATCGTAACTTAATAAGAACAAAGACTTCGTACTAAATGTT 1348 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1266 ATAAATAAAATGTCTATCCTATCGTAACTTAATAAGTACAAAGACTTCGTACTAAATGTT 1325 Query 1349 GTTTTTCTTTATAGGGATAATTAATCAAGTGGCCATGAAATGA 1391 ||||||||||| |||| | |||||| ||||||||||||||||| Sbjct 1326 GTTTTTCTTTAAAGGGGTCATTAATTAAGTGGCCATGAAATGA 1368 > AT5G24780.1 | Symbols: VSP1, ATVSP1 | vegetative storage protein 1 | chr5:8507590-8508957 REVERSE LENGTH=1074 Length=1074 Score = 1086 bits (588), Expect = 0.0 Identities = 797/893 (89%), Gaps = 34/893 (4%) Strand=Plus/Plus Query 181 ATA-AATACCACCCTTTGTGTCACACAAATAAGCATCACAAACTAAACAATAAACCATAT 239 ||| |||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct 1 ATATAATACCACCCTTTGTGTCACACAAATAAACACCATAAACTAAACAATAAACC---- 56 Query 240 ATACCACAAAAAACATGAAAATCCTCTCACTTTCACTTCTCTTGCTCTT-G--GC--C-G 293 ||| || |||||| ||||||||||||||||||||||| ||||||||||| | || | | Sbjct 57 ATA-CA-AAAAAATATGAAAATCCTCTCACTTTCACTACTCTTGCTCTTGGCCGCTACGG 114 Query 294 -CT---ACG----GTC-TCGGCATCCGTTCCAGAGCTCATCGAACTCGTCGAATCGAACA 344 || ||| ||| |||||||||||||||| ||||||||||||| |||||||||||| Sbjct 115 TCTCCCACGTCCAGTCTTCGGCATCCGTTCCAGGGCTCATCGAACTCCTCGAATCGAACA 174 Query 345 CCATCTTTGGGAACGAAGCCGAACTCTTAGAGAAAGAGAAACT-TACCATCAACTACCAC 403 |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| | Sbjct 175 CCATCTTTGGGAACGAAGCCGAACTCTTAGAGAAAGAGGGACTGT-CCATCAACTACCCC 233 Query 404 AACTGCAGAAGCTGGCACCTTGGTGTTGAGACCTCTAACATCATAGACTTCGACACCGTG 463 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 234 AACTGCAGAAGCTGGCACCTTGGTGTTGAGACCTCTAACATCATAAACTTCGACACGGTG 293 Query 464 CCCGCAAATTGCAAAGACTATGTTGAAGACTACTTGATCACTTCCAAACAGTACCAAT-C 522 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 294 CCCGCAAATTGCAAAGCCTATGTTGAAGACTACTTGATCACTTCCAAACAGTACCAATAC 353 Query 523 TGACTCCAAAACGGTGTGCAAAGAGGCTTATTTCTACGCCAAAGGACTTGCCCTAAAGAA 582 ||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||| Sbjct 354 -GACTCCAAAACTGTAAACAAAGAGGCATATTTTTACGCCAAAGGACTTGCCCTAAAGAA 412 Query 583 CGATACCGTCAATGTTTGGATCTTTGACCTAGACGACACTCTCCTCTCTAGTATCCCCTA 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 413 CGATACCGTCAATGTTTGGATCTTTGACCTAGACGACACTCTCCTCTCTAGTATTCCCTA 472 Query 643 CTACGCCAAATATGGATACGGGACAC-AGAAGACCGACCCGGGAGCATACTGGTTGTGGT 701 |||||| ||||||||||| ||||| | |||| || | |||||| || ||||||| ||||| Sbjct 473 CTACGCTAAATATGGATATGGGAC-CGAGAACACAGCCCCGGGGGCGTACTGGTCGTGGT 531 Query 702 TAGGGACCGGAGCATCAACTCCCGGGCTTCCGGAGACTTTGCTTCTATACCAAAACCTCT 761 ||| | |||||| ||||||||| || || |||||||| |||| ||||||| ||||||||| Sbjct 532 TAGAGTCCGGAGAATCAACTCCAGGACTCCCGGAGACCTTGCATCTATACGAAAACCTCT 591 Query 762 TAGAACTCGGGATTGAACCCATCATACTCAGTGACCGTTGG---AAATTGTGGAAGAATG 818 | |||||||||||||||||||||||| || |||| | ||| ||||||| |||| | Sbjct 592 TGGAACTCGGGATTGAACCCATCATAATCTCTGACAGATGGAAAAAATTGT--CAGAA-G 648 Query 819 TCACTCTCGAGAATCTTGAGGCTGCTGGTGTGACCTACTGGAAGCATCTCATATTAAAGC 878 ||||| |||||||||| |||||| |||||| || | ||||||||||||||| | |||| Sbjct 649 TCACTGTCGAGAATCTCAAGGCTGTTGGTGTAACAAAATGGAAGCATCTCATACTCAAGC 708 Query 879 CAAACGGTTCGAAATTGAGGCAAGTGGTGTACAAGTCAAAGGTGAGGAAGAGCCTGGTGA 938 ||||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||| |||| Sbjct 709 CAAACGGATCGAAGTTGACGCAAGTGGTGTACAAGTCAAAGGTTAGGAATAGCCTTGTGA 768 Query 939 AGAAAGGATACAACATCGTTGGCAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATA 998 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 769 AGAAAGGGTACAACATCGTTGGGAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATA 828 Query 999 CTCCTGGAAGGGTTTTTAAGCTCCCAAATCCACTCTACTACGTACCTTCTTAA 1051 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 CTCCTGGAAGGGTTTTTAAGCTCCCAAATCCACTCTACTACGTACCTTCTTAA 881 Score = 462 bits (250), Expect = 3e-129 Identities = 315/346 (91%), Gaps = 6/346 (2%) Strand=Plus/Plus Query 1050 AAGTGGTGTACAAGTCAAAGGTGAGGAAGAGCCTGGTGAAGAAAGGATACAACATCGTTG 1109 |||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||| Sbjct 730 AAGTGGTGTACAAGTCAAAGGTTAGGAATAGCCTTGTGAAGAAAGGGTACAACATCGTTG 789 Query 1110 GGAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATACTCCTGGAAGGGTCTTTAAGC 1169 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 790 GGAATATTGGAGACCAATGGGCTGATTTGGTTGAGGATACTCCTGGAAGGGTTTTTAAGC 849 Query 1170 TCCCAAATCCACTCTACTACGTACCTTCTTAAGTA----TCTATGTTCATGGCTTTGTCC 1225 |||||||||||||||||||||||||||||||| || ||||| |||||||| |||||| Sbjct 850 TCCCAAATCCACTCTACTACGTACCTTCTTAATTAAGCATCTATCTTCATGGCATTGTCC 909 Query 1226 CCTTGTATCCACTCCATATCTATGTC-TTTCCGTTTATCTTTATAGCCGTTTTGGCACCG 1284 ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||| Sbjct 910 CCTTGTATCCATTTCATATCTATGTCGTTTC-GTTTATCTTTGTAGCCGTTTTGGCACCA 968 Query 1285 CTGCATAAATAAAATGTCTATCCTATCGTAACTTAATAAGAACAAAGACTTCGTACTAAA 1344 |||| ||||||||||| | |||||||| ||||| |||||| |||| |||||||||||||| Sbjct 969 CTGCTTAAATAAAATGCCAATCCTATCATAACTCAATAAGTACAACGACTTCGTACTAAA 1028 Query 1345 TGTTGTTTTTCTTTATAGGGATAATTAATCAAGTGGCCATGAAATG 1390 | ||||||||| ||| |||||| ||||||||||| |||||||||| Sbjct 1029 TTTTGTTTTTCGTTAAAGGGATCATTAATCAAGTTTCCATGAAATG 1074 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68523743925 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5