BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489456 Length=2237 Score E Sequences producing significant alignments: (Bits) Value AT5G26120.1 | Symbols: ATASD2, ASD2 | alpha-L-arabinofuranosida... 1951 0.0 > AT5G26120.1 | Symbols: ATASD2, ASD2 | alpha-L-arabinofuranosidase 2 | chr5:9121727-9125967 REVERSE LENGTH=2208 Length=2208 Score = 1951 bits (1056), Expect = 0.0 Identities = 1228/1312 (94%), Gaps = 8/1312 (1%) Strand=Plus/Plus Query 931 AAATGATCTTTTCCAAATGATGGTTGATCTAAAACCGC-GTTTCATCCGATTCCCGGGTG 989 |||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||||||| Sbjct 816 AAATGACCTTTTCCAAATGATGGTCGATCTAAAACCGCGGTTT-ATCCGATTCCCGGGTG 874 Query 990 GTTGTTTTGTGGAGGGTGAATGGTTAGGCAATGCATTCCGCTGGAAAGAAACCGTGGGAG 1049 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 875 GTTGTTTTGTGGAGGGTGATTGGTTAGGCAATGCATTCCGCTGGAAAGAAACCGTGAGAG 934 Query 1050 CTTGGGAAGAGAGACCTGGCCATTATGGCGATGTTTGGAAGTACTGGACTGATGATGGCC 1109 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 935 CTTGGGAAGAGAGACCTGGCCATTATGGTGATGTTTGGAAGTACTGGACTGATGATGGCC 994 Query 1110 TTGGTCACTTTGAATTCTTTCAACTTGCAGAAGACATTGGTGCAGCCCCAGTATGGGTGT 1169 |||| |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct 995 TTGGCCACTTTGAATTCTTTCAACTTGCAGAAGACCTTGGTGCATCCCCAATATGGGTGT 1054 Query 1170 TTAACAATGGGATCAGTCACAATGATCAAGTTGAAACAGAAAATGTCAAGCCTTTTGTTC 1229 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 1055 TTAACAATGGGATCAGTCACAATGATCAAGTTGAAACAAAAAATGTCATGCCTTTTGTTC 1114 Query 1230 AAGAAGCGATTGACGGTATAGAGTTTGCTCGCGGAGATCCTCAGTCTACATGGGGATCGG 1289 ||||||||||||||||||||||||||||||| |||||| || | |||||||||||||||| Sbjct 1115 AAGAAGCGATTGACGGTATAGAGTTTGCTCGTGGAGATTCTAATTCTACATGGGGATCGG 1174 Query 1290 TTCGAGCTGCAATGGGACATCCAGAGCCTTTTGAACTGAAATATGTTGCGGTCGGGAATG 1349 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1175 TTCGAGCTGCAATGGGACATCCAGAGCCTTTTGAACTGAAATATGTTGCGGTTGGGAATG 1234 Query 1350 AAGATTGTTTTAAGAGTTACTACAGAGGAAACTATCTTGAGTTTTATGATGCTATCAAAA 1409 |||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| Sbjct 1235 AAGATTGTTTTAAGAGTTACTACAGAGGAAACTATCTTGAATTCTATAATGCTATCAAAA 1294 Query 1410 AAGCTTATCCAGACATCAAAATCATCTCCAACTGCGATGCATCGTTTAAGCCGCTCGATC 1469 ||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 1295 AAGCTTATCCAGATATTAAAATCATCTCCAACTGCGATGCATCGGCTAAACCGCTCGATC 1354 Query 1470 ACCCTGCTGACTACTTTGATTACCACATTTATACTCTTGCAAAG-GATTTGTTTTCCAGG 1528 |||| || || |||||||||||||||||||| |||||||| ||| || |||||||||| | Sbjct 1355 ACCCGGCCGATTACTTTGATTACCACATTTACACTCTTGC-AAGAGACTTGTTTTCCAAG 1413 Query 1529 TCCCATGACTTTGACAATACACCGCGCAACGGTCCAAAGGCTTTTGTTAGCGAGTACGCT 1588 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 1414 TCCCATGATTTTGACAATACACCGCGAAACGGTCCAAAGGCTTTTGTTAGCGAATACGCT 1473 Query 1589 GTAAACAAAACGGATGCTAATAATGGAAACCTTTTGGCCGCTCTTGGGGAAGCAGCCTTC 1648 ||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||| ||| Sbjct 1474 GTAAACAAAGCAGATGCTAAAAATGGCAACCTTTTGGCCGCTCTTGGTGAAGCAGCTTTC 1533 Query 1649 CTCCTTGGTTTGGAAAAGAACAGTGACATTGTAGGAATGGTTAGCTATGCACCTCTCTTT 1708 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1534 CTCCTTGGTTTGGAAAAGAACAGTGACATTGTAGAAATGGTTAGCTATGCACCTCTCTTT 1593 Query 1709 GTCAACACAAATGATAAAAGGTGGATCCCTGATGCAATAGTTTTTAACTCGTCTCATCTA 1768 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1594 GTCAACACAAACGATAGAAGGTGGATCCCTGATGCAATAGTTTTTAACTCGTCTCATCTA 1653 Query 1769 TATGGAACTCCTAGCTATTGGGTCCAACAGTTCTTCACCGAGTCAAGCGGAGCAACTCTT 1828 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1654 TATGGAACTCCTAGCTATTGGGTCCAACACTTCTTCACCGAGTCAAGCGGAGCAACTCTT 1713 Query 1829 CTCAATTCTACTCTTAAGGGAAACTCTTTTTCTATTGAAGCATCTGCTATCTCCTTCCAA 1888 ||||||||||| ||||||||||| ||| |||| ||||||||||||| ||||| |||||| Sbjct 1714 CTCAATTCTACACTTAAGGGAAAGACTTCTTCTGTTGAAGCATCTGCCATCTCTTTCCAA 1773 Query 1889 GCCAATGGCAAA-ACTTACATACAAATCAAGGCTGTAAACTTTGGAGAAGAATCAGTAAA 1947 ||||||||||| | ||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 1774 ACCAATGGCAAAGA-TTACATACAGATCAAGGCTGTAAACTTTGGAGAACAATCAGTAAA 1832 Query 1948 TCTAAAGGTAACGGTGACCGGATTGATCGCAAAATTTTATGGATCCAAGAAGAAAGTACT 2007 |||||||||| | ||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct 1833 TCTAAAGGTAGCAGTGACAGGATTGATGGCAAAATTTTATGGATCCAAAAAGAAAGTACT 1892 Query 2008 TACATCTGCCAATGTGATGGATGAGAATTCTTTCTCAACCCCAGAGATGATTGTGCCGCA 2067 ||||||||||| ||||||||||||||| ||||| |||| |||| | ||||||||||| || Sbjct 1893 TACATCTGCCAGTGTGATGGATGAGAACTCTTTTTCAAACCCAAATATGATTGTGCCACA 1952 Query 2068 AGAAAGCTTGCTAGAGATGACTGAGGAGGAGGACCTTATGTTTGTTCTCCCGCCGCACTC 2127 |||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 1953 AGAAAGTTTGCTGGAGATGACTGAGCAGGAAGACCTTATGTTTGTTCTCCCGCCGCACTC 2012 Query 2128 GTTCTCCTCCTTCGATTTGTTGAAACAATCTGAAAATATCATCAAGATGCCAATAT--GA 2185 |||||| |||||||||||||||| | ||||||||||| |||||||||||||||||| || Sbjct 2013 GTTCTCTTCCTTCGATTTGTTGACAGAATCTGAAAATGTCATCAAGATGCCAATATCTGA 2072 Query 2186 TTCCTACAACAAAACTTCAACAATGTGAAGAGAAACATCATGTTGGAGACTT 2237 ||| ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 2073 TTCATACAAGAAAACTTCAACAATGTGAAGAGAAACATCATCTTGGAGACTT 2124 Score = 1109 bits (600), Expect = 0.0 Identities = 751/821 (91%), Gaps = 21/821 (3%) Strand=Plus/Plus Query 1 ACTTTTAATCCTCGTTTCACTGCTCATTCGTGTCTTTCTTCTATCAAGGTTAATTACCTT 60 |||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct 1 ACTTTTAATCCTAGTTTCACTGCTCATTCGTGTCTTTCTTCTATCAAGG-----T--CTT 53 Query 61 TCTCTGATTAGATCTGGTGACGATGGACATGGAGACTTCTTGGAGATTTCTCAAAAGTGT 120 |||||| ||| || |||||| ||||||||||| || |||||||||||||||| |||||| Sbjct 54 TCTCTGGTTAAATTTGGTGATTATGGACATGGAAACATCTTGGAGATTTCTCAGAAGTGT 113 Query 121 TTGCATACTTTCCTTTCTCATTGGCG-CTTGTTCTGTCTACCAAAGCCTTTGTCTTGTCG 179 |||| ||||||| ||| || |||| | ||| |||||||||||||| |||||||||||| | Sbjct 114 TTGCTTACTTTCATTTATCCTTGG-GTCTTTTTCTGTCTACCAAACCCTTTGTCTTGTTG 172 Query 180 ATGCTCAAGCAGACGCCATTGTAACATTGCAAGTAGATGCTTCTAACATGACAAGACGAC 239 | ||||||| |||||||||||||||| |||||||||||||||||||| ||||| | |||| Sbjct 173 ACGCTCAAGAAGACGCCATTGTAACACTGCAAGTAGATGCTTCTAACGTGACACGGCGAC 232 Query 240 CAATTCCTGAAACTCTATTCGGAATCTTCTTTGAGGAAATAAATCATGCTGGAGCAGGTG 299 | ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 233 CGATTCCCGAAACTCTATTTGGGATCTTCTTTGAGGAAATAAATCATGCTGGAGCAGGTG 292 Query 300 GACTATGGGCTGAACTTGTTAGCAACAGAGGATTTGAAGCTGGTGGACAAACCATTCCTT 359 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 293 GACTATGGGCTGAACTTGTTAGCAATAGAGGATTTGAAGCTGGTGGACAAATCATTCCTT 352 Query 360 CCAATATCTGGCCTTGGTCCATTATTGGAGATGAATCATCCATATATGTCGTTACAGACC 419 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 353 CCAATATCTGGCCTTGGTCCATTATTGGAGATGAATCATCCATTTATGTTGTTACAGACC 412 Query 420 GTTCTTCGTGTTTTGAGCGTAACAAGATTGCTCTTAAAATGGAAGTGCTTTGTGACAGCA 479 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 413 GTTCTTCGTGTTTTGAGCGTAACAAGATTGCTCTTAGAATGGAAGTCCTTTGTGACAGCA 472 Query 480 ATGGCAGTAGCAATTGTTGTCCATCAGGAGGAGTTGGGATTTATAACCCGGGTTATTGGG 539 | | | | |||| || | ||||||||| ||| |||||||||||||||| |||| Sbjct 473 A---C--T--C--TTGT---CCGTTAGGAGGAGTCGGGGTTTATAACCCGGGTTACTGGG 520 Query 540 GCATGAACATTGAAGAAGCGAAGAAATACAAAGTGGTGTTCTATGTGCGTTCGACCGGAG 599 |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| || | Sbjct 521 GCATGAACATTGAAGAAGGGAAGAAATATAAAGTGGTGTTATATGTGCGTTCGACTGGGG 580 Query 600 ACATCGATGTGTCTGTGTCGTTTACAAGTTCGAATGGATCATTGACTCTTGCGTCAGAAA 659 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 581 ACATCGATGTGTCTGTGTCGTTTACAAGTTCTAATGGATCAGTGACTCTTGCGTCAGAAA 640 Query 660 ATATTATAGCTTTGGCTTCTGATGTTTCAAATTGGACTAAAAAGGAAATGCTTTTAGAAG 719 ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| Sbjct 641 ATATTATAGCTTTGGCTTCTGATCTTTTAAATTGGACAAAAAAGGAAATGCTTTTAGAAG 700 Query 720 CAAATGGAACAGATAATGGTGCAAGACTTCAGTTTACAACAACCAAAAAAGGTTCAATTT 779 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 701 CAAATGGAACAGATAATGGTGCAAGACTTCAGTTTACAACTACCAAAAAAGGTTCAATTT 760 Query 780 GGTTTGACCAAGTCTCAGCCATGCCTATGGATACTTACAAG 820 ||||||| ||||||||||||||||||||||||||||||||| Sbjct 761 GGTTTGATCAAGTCTCAGCCATGCCTATGGATACTTACAAG 801 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110993404995 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5