BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489570 Length=2279 Score E Sequences producing significant alignments: (Bits) Value AT5G27600.1 | Symbols: LACS7, ATLACS7 | long-chain acyl-CoA syn... 3448 0.0 > AT5G27600.1 | Symbols: LACS7, ATLACS7 | long-chain acyl-CoA synthetase 7 | chr5:9742576-9747005 FORWARD LENGTH=2353 Length=2353 Score = 3448 bits (1867), Expect = 0.0 Identities = 2173/2315 (94%), Gaps = 44/2315 (2%) Strand=Plus/Plus Query 1 AGAAAGAAGAAAAGATGAAATTTGCTTCGCCGGCACAACGTCGTCTCGAAACCATTCGAT 60 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 27 AGAAAGAAGAAAAGATGGAATTTGCTTCGCCGGAACAACGTCGTCTCGAAACCATTCGAT 86 Query 61 CTCACCTCTATACTTCTCCGGCCGACGATCAATCATC-TCTC--TTCCTCAACGCCACCG 117 ||||| || ||||||||||| || ||||||||||||| |||| |||||||||||||||| Sbjct 87 CTCACATCGATACTTCTCCGACCAACGATCAATCATCATCTCTATTCCTCAACGCCACCG 146 Query 118 CTTCTTCTGCTTCACCTTTC-TTAAACAAGGATGGCTACAGTGTTGTACTTCCAGAGAAG 176 |||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||| ||| Sbjct 147 CTTCTTCTGCTTCACCTTTCTTTAAA-GAGGATAGCTACAGTGTTGTGCTTCCAGAAAAG 205 Query 177 CTTGATAATGGAAAATGGAATGTCTACAGATCTGCAAAG-TCGCCGACGAAACTCGTTAG 235 ||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 206 CTTGATACTGGAAAATGGAATGTCTACAGATCT-AAAAGATCGCCTACGAAACTCGTTAG 264 Query 236 CAGGTTCCAGGATCATCCTGAAATCGGGACTTTGCATGACAATTTTGTATATGCTGTTGA 295 ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 265 TAGGTTCCCGGATCATCCTGAAATCGGGACTTTACATGACAATTTTGTACATGCTGTTGA 324 Query 296 AACATATCCTGAGAACAAGTATCTTGGTACACGAGTTCGGTCCGATGGAACCATTGGAGA 355 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 325 AACATATGCTGAAAACAAGTATCTTGGTACACGAGTTCGGTCCGATGGAACCATTGGAGA 384 Query 356 GTACTCATGGATGACATATGCAGAAACAGCTTCTGAACGACAAGCTATTGGTTCAGGACT 415 ||| |||||||||||||||| |||| |||| ||||| |||||||| |||||||||||||| Sbjct 385 GTATTCATGGATGACATATGGAGAAGCAGCGTCTGAGCGACAAGCCATTGGTTCAGGACT 444 Query 416 CCTGTTTCATGGAATTAACCAAGGAGCTTGTGTTGGACTCTATTTTATTAACAGACCAGA 475 | ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 445 CTTGTTTCATGGAGTTAACCAAGGAGATTGCGTTGGACTCTATTTTATTAACAGACCAGA 504 Query 476 GTGGTTGGTTGTGGATCATGCTTGTGCAGCATATTCATTTGTCTCTGTTCCTTTATACGA 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 505 GTGGTTGGTTGTGGATCATGCTTGTGCAGCATATTCATTTGTCTCTGTTCCTTTATATGA 564 Query 536 TACACTTGGTCCAGACGCTGTTAAGTTCGTGGTGAATCATGCTACTCTGCAGGCTATATT 595 ||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct 565 TACACTTGGTCCAGACGCTGTTAAGTTTGTGGTGAATCATGCTAATCTGCAAGCTATATT 624 Query 596 TTGTGTACCACAAACCTTGAATATTTTGCTAAGCTTCCTAGCGGAAATCCCATCCATTCG 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 625 TTGTGTACCACAAACCTTGAATATTTTGCTAAGCTTCCTAGCGGAAATCCCATCCATTCG 684 Query 656 TCTCATTGTGGTGGTGGGAGGGGCGGACGAGCATTTGCCATCACTTCCTCAAGGATCTGG 715 |||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||| Sbjct 685 TCTCATTGTGGTGGTGGGAGGGGCTGATGAGCATTTGCCATCACTTCCTCGAGGAACTGG 744 Query 716 AGTCA-ATATTGTATCATACCAAAAGCTTTTGAGTCAGGGTCGAAGTAGCTTACATCCAT 774 ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 745 AGTCACA-ATTGTATCATACCAAAAGCTATTGAGTCAGGGTCGAAGTAGCTTACATCCAT 803 Query 775 TTTCCCCTCCAAAACCCGAAGACATTGCAACCATATGCTACACAAGTGGAACCACAGGAA 834 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 TTTCGCCTCCAAAGCCAGAAGACATTGCAACCATATGCTACACAAGTGGAACCACAGGAA 863 Query 835 CACCAAAGGGTGTTGTGTTGACTCATGGAAACTTGATTGCAAATGTCGCCGGTTCCAGTG 894 ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| Sbjct 864 CACCAAAGGGTGTTGTGTTGACTCATGGAAACTTGATCGCGAATGTCGCTGGTTCCAGTG 923 Query 895 TGGAAGCAGAATTCTTACCTTCAGATGTTTACATATCATATCTTCCTTTGGCGCACATAT 954 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 TGGAAGCAGAATTCTTTCCTTCAGATGTTTACATATCATATCTTCCTTTGGCGCACATAT 983 Query 955 ATGAACGTGCAAATCAGATTATGGCTGTGTATGGTGGTGTTACTGTCGGTTTCTATCAGG 1014 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 984 ATGAACGTGCAAATCAGATTATGGGGGTGTATGGTGGTGTTGCTGTCGGTTTCTATCAGG 1043 Query 1015 GGGATGTCTTCAAGCTGATGGATGATTTTGCTGTGTTAAGGCCAACAATATTCTGTAGTG 1074 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1044 GGGATGTCTTCAAGCTGATGGATGATTTTGCTGTGTTAAGACCAACAATATTCTGTAGTG 1103 Query 1075 TCCCCCGCTTATATAATCGAATATATGATGGAATCACTAGTGCCGTAAAATCATCTGGGG 1134 |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct 1104 TCCCTCGCTTATATAATCGAATATATGATGGCATTACAAGTGCCGTAAAATCATCTGGGG 1163 Query 1135 TTATTAAACAAAGGCTGTTTC-AAGTTGCCTATAACTCAAAGAAGCAAGCGATCATAAAT 1193 || | ||| ||||||| |||| || ||||||||||||||||||||||||||||||| ||| Sbjct 1164 TTGTGAAAAAAAGGCT-TTTCGAAATTGCCTATAACTCAAAGAAGCAAGCGATCATTAAT 1222 Query 1194 GGACGGAATCCGTCTGCATTTTGGGACAAACTGGTCTTCAACAAAATAAAAGAAAAGCTT 1253 || |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 1223 GGGCGGACTCCTTCTGCATTTTGGGACAAGCTGGTGTTCAACAAAATAAAAGAAAAGCTT 1282 Query 1254 GGTGGACGGGTTCGCTTTATGGGGTCAGGTGCTTCTCCATTGTCACCCGATGTCATGGAT 1313 |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 1283 GGTGGACGGGTTCGGTTTATGGGGTCTGGTGCTTCTCCTTTGTCACCTGATGTCATGGAT 1342 Query 1314 TTCTTGAGAGTATGCTTTGGATGTTCGGTGCGTGAAGGGTATGGTATGACCGAGACTTCT 1373 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1343 TTCTTGAGAATATGCTTTGGATGTTCGGTGCGTGAAGGGTATGGTATGACCGAGACTTCT 1402 Query 1374 TGTGTCATAAGCGCTATGGATGATGGTGACAATTTATCTGGCCATGTTGGATCCCCTAAT 1433 ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1403 TGTGTCATAAGTGCTATGGATGATGGTGACAATTTATCTGGCCATGTCGGTTCCCCTAAT 1462 Query 1434 CCAGCGTGTGAGGTAAAACTTGTGGATGTTCCCGAAATGAATTACACATCAGATGATCAA 1493 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1463 CCAGCTTGCGAGGTAAAACTTGTGGATGTTCCCGAAATGAATTACACATCAGACGATCAA 1522 Query 1494 CCATACCCACGTGGGGAAATCTGTGTAAGAGGACCAATCATCTTCAAAGGCTACTACAAA 1553 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1523 CCATACCCACGTGGTGAAATCTGTGTAAGAGGACCAATCATCTTCAAAGGCTACTACAAA 1582 Query 1554 GATGAGGAACAAACGAGAGAAATTCTTGATGGAGATGGCTGGCTACACACAGGAGATATC 1613 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1583 GATGAAGAACAAACGAGAGAAATTCTTGATGGAGATGGCTGGCTACACACAGGAGATATC 1642 Query 1614 GGGTTGTGGTTACCTGGTGGTCGGCTCAAGATCATAGACAGGAAGAAGAACATATTTAAG 1673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1643 GGGTTGTGGTTACCTGGTGGTCGGCTCAAGATCATAGACAGGAAGAAGAACATATTTAAG 1702 Query 1674 TTGGCGCAAGGAGAATATATAGCACCAGAGAAAATCGAAAATGTTTATACCAAATGCAGA 1733 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1703 TTGGCGCAAGGAGAATATATAGCACCAGAGAAGATCGAAAATGTTTATACCAAATGTAGA 1762 Query 1734 TTTGTTTCGCAGTGTTTCATACACGGTGATAGCTTCAATTCCTCTCTGGTAGCTATAGTT 1793 || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1763 TTCGTTTCGCAGTGTTTCATTCACGGTGATAGCTTCAATTCCTCTCTAGTAGCTATAGTT 1822 Query 1794 TCAGTTGACCCAGATGTTATGAAAGATTGGGCTGCATCAGAAGGCATCAAGTATGAGCAT 1853 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1823 TCAGTCGACCCCGAAGTTATGAAAGATTGGGCTGCATCAGAAGGCATCAAGTATGAGCAT 1882 Query 1854 CTAGGACAGCTCTGTAACGATCCAAGAGTACGTAAGGCTGTTCTTGCTGAGATGGATGAC 1913 ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| Sbjct 1883 CTAGGACAGCTCTGTAACGATCCAAGAGTGCGAAAGACTGTTCTTGCTGAGATGGATGAC 1942 Query 1914 CTTGGAAGAGAAGCTCAGTTGAGAGGATTTGAGTTTGCAAAGGCTGTGACTTTGGTGCCA 1973 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1943 CTTGGAAGAGAAGCTCAGTTGAGAGGGTTTGAGTTTGCAAAGGCTGTGACTTTGGTGCCA 2002 Query 1974 GAACCATTCACCTTAGAGAATGGACTTTTGACACCAACATTCAAGATAAAGAGACCTCAA 2033 |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct 2003 GAACCATTCACCTTGGAGAATGGACTTCTCACACCAACATTCAAGATAAAGAGACCTCAA 2062 Query 2034 GCAAAAGCTTACTTTGCAGAAGCAAT-ATCCAAAATGTATGCGGAAATCGCAGCCTCGAA 2092 |||||||| ||||||||||||||||| | | ||||||||||||||||||||||||||||| Sbjct 2063 GCAAAAGCCTACTTTGCAGAAGCAATTAGC-AAAATGTATGCGGAAATCGCAGCCTCGAA 2121 Query 2093 CCCCATGCCTTCTAAACTGTGATGATTTA--CATTACTTAAAAGTGTTTCtttttttt-- 2148 |||||| ||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct 2122 CCCCATTCCTTCTAAACTGTGATGCTTTTTGCTTTGCTTAAAAGTGTTTCTTTTTTTTTG 2181 Query 2149 -ATTACAA-GGTAATTGTAGAACTGT-AAAAGATCGGATTAG-A-G-G-TAGATCGATCA 2201 ||||||| ||||||||||||||||| ||||||||||||||| | | | ||||||||||| Sbjct 2182 TATTACAAAGGTAATTGTAGAACTGTTAAAAGATCGGATTAGGATGAGGTAGATCGATCA 2241 Query 2202 T--GAAATAAAACAGATTCATG----------CT--G-TA--GTTTTCCAGAATAAAGGA 2244 | ||||||||||||||||||| || | || |||||||||||||||||| Sbjct 2242 TTTGAAATAAAACAGATTCATGGTGTAATTTTCTTTGATACTGTTTTCCAGAATAAAGGA 2301 Query 2245 AGAGCAGACTATGATCCTAATCCTGAAATGGATGA 2279 || ||||||||| ||||||||||||||||||||| Sbjct 2302 AG--CAGACTATG-TCCTAATCCTGAAATGGATGA 2333 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113101827885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5