BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489590 Length=1874 Score E Sequences producing significant alignments: (Bits) Value AT5G27380.1 | Symbols: GSH2, GSHB | glutathione synthetase 2 | ... 2601 0.0 > AT5G27380.1 | Symbols: GSH2, GSHB | glutathione synthetase 2 | chr5:9667971-9670962 REVERSE LENGTH=1910 Length=1910 Score = 2601 bits (1408), Expect = 0.0 Identities = 1708/1850 (92%), Gaps = 32/1850 (2%) Strand=Plus/Plus Query 49 GGCAGTGtctgctcttctccctcttacttttcttcttccacttgctttgcctctcatttc 108 ||||||| ||||||||||| |||||||| || |||||||||||| |||| || |||| Sbjct 54 GGCAGTGGCTGCTCTTCTCTCTCTTACTCATCATCTTCCACTTGCAATGCCACTGTTTTC 113 Query 109 tcta--t-ttcttctcc-t--tcatcttcttcGCTGAAACTCAATCCAAG-ACGCTTCCT 161 |||| | ||||||||| | || |||||||||||||||||||||||||| | ||||||| Sbjct 114 TCTATTTCTTCTTCTCCATCATCTTCTTCTTCGCTGAAACTCAATCCAAGTA-GCTTCCT 172 Query 162 TTTCCATAACCCTAGAAA-TCTGAGAAAGCAGGCACCTTTGAGGTGTGGGAGATCCCTGG 220 |||||| ||||||| ||| ||||||||| ||| |||||||||||||||||||||| | Sbjct 173 TTTCCAGAACCCTA-AAACTCTGAGAAATCAGTCACCTTTGAGGTGTGGGAGATCATTTA 231 Query 221 AGATGGAATCAAAGAAACCCATTTTCGATGTGGACACGTTTGATGATGATTTTGTTCAGA 280 ||||||||||| ||||||||||||||||| |||| | || |||||||| |||||||||| Sbjct 232 AGATGGAATCACAGAAACCCATTTTCGATTTGGAGAAATTAGATGATGAGTTTGTTCAGA 291 Query 281 AACTGGTTTATGATGCTCTCGTTTGGTCTTCTCTTCACGGACTCGTCGTCGGTGACAAAA 340 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 292 AACTGGTTTACGATGCTCTCGTTTGGTCTTCTCTTCACGGACTCGTCGTTGGTGACAAAA 351 Query 341 CTTACCAGAAATCAGGAAATGTTCCAGGGGTTGGATTGATGCACGCACCGATTGCATTGC 400 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 352 GTTATCAGAAATCAGGAAATGTTCCAGGGGTTGGATTGATGCACGCACCTATTGCATTGC 411 Query 401 TACCAACTTCATTCCCTGAAATTTATTGGAAGCAAGCTTGTGATGTTACTCCTATTTTCA 460 |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||| |||||| Sbjct 412 TACCAACTGCATTCCCAGAAGCTTATTGGAAGCAAGCTTGTAATGTTACTCCTCTTTTCA 471 Query 461 ATGAATTGATTGATCGTGTTAGCTTGGATGGGAAGTTCTTACAGGATAGTCTCTCTAGAA 520 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 472 ATGAATTGATTGATCGTGTTAGCTTGGATGGCAAATTCTTACAGGATAGTCTCTCTAGAA 531 Query 521 CGAAAAAAGCTGACGTCTTTACATCTAGACTTCTCGACATTCACTCCAAGATGCTTGAAA 580 |||| |||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 532 CGAAGAAAGTTGATGTCTTTACATCTAGACTTCTTGACATTCACTCCAAGATGCTAGAAA 591 Query 581 GAAACAAGAAAGAGGATATTCGTCTGGGTTTGCAGCGGTTTGATTATATGCTTGACGAAG 640 |||| ||||||||||| |||||| ||||||| || ||||||||||||||||||||||||| Sbjct 592 GAAATAAGAAAGAGGACATTCGTTTGGGTTTACACCGGTTTGATTATATGCTTGACGAAG 651 Query 641 AAACAAATTCACTTCTTCAGATTGAGATGAACACTATCTCTTGTTCGTTTCCAGGCCTTA 700 ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct 652 AAACAAATTCACTTCTTCAGATTGAGATGAATACTATCTCGTGTTCGTTTCCTGGCCTTA 711 Query 701 GTCGTCTTGTTAGCCAGCTACACCAGTCATTGCTTCGATCTTATGGGGATCAGATTGGCA 760 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 712 GTCGTCTTGTTAGCCAGCTACATCAGTCATTGCTTCGATCTTATGGGGATCAGATTGGCA 771 Query 761 TAGACTCTGAACGTGTACCTAGAAATACATCCACAATCCAATTTGCTGATGCAATAGCTA 820 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||| Sbjct 772 TAGACTCTGAACGTGTACCTATAAACACATCCACAATCCAATTTGCTGATGCATTGGCTA 831 Query 821 AAGCTTGGTTGGAGTACAATAACCCAAGAGCGGTTGTCATGGTAATTGTACAGCCAGAAG 880 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct 832 AAGCTTGGTTGGAGTACAGTAACCCAAGAGCGGTAGTCATGGTAATTGTACAGCCAGAAG 891 Query 881 AACGCAACATGTATGATCAACATTTGCTGAGC-----A--G-GA-ACACGCACAATATAG 931 ||||||||||||| |||||||||||||||||| | | || | | ||| ||||||| Sbjct 892 AACGCAACATGTACGATCAACATTTGCTGAGCAGTATATTGAGAGAAAAGCATAATATAG 951 Query 932 TAGCCATCAGGAAGACTCTAGCAGAAGTCGAAACTGAAGGGAGTGTACAAGAGGATGGAA 991 | | ||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 952 TTGTCATCAGGAAGACTCTAGCAGAAGTCGAAAAAGAAGGGAGTGTACAAGAGGATGAAA 1011 Query 992 CCCTTATTGTTGGCGGCCAAGCGGTCGCGGTGGTTTATTTCAGATCTGGCTATACTCCCA 1051 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct 1012 CCCTTATTGTTGGCGGCCAAGCAGTCGCAGTGGTTTATTTCAGATCTGGCTATACTCCTA 1071 Query 1052 ATGATCATCCGTCTGAATCAGAATGGAATGCTAGGCTGCTTATTGAGGAGTCTTCAGCGG 1111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1072 ATGATCATCCGTCTGAATCAGAATGGAATGCTAGGCTGCTTATTGAGGAGTCTTCAGCTG 1131 Query 1112 TCAAATGCCCGAGTATAGCTTACCATTTAACTGGCAGCAAGAAAATCCAGCAAGAACTGG 1171 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1132 TCAAATGCCCGAGCATAGCTTACCATTTAACTGGCTCCAAGAAAATCCAGCAAGAACTGG 1191 Query 1172 CAAAACCAGGTGTTCTCGAGAGGTTTCTGGACAACAAAGAGGACATTGCTAAGATGAGGA 1231 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1192 CTAAACCAGGTGTTCTCGAGAGGTTTCTGGACAACAAAGAGGACATTGCTAAGCTGAGGA 1251 Query 1232 AATGCTTTGCGGGGCTTTGGAGCTTGGATGACCCAGAAATCGTCAAGCAGGCAATCGAAA 1291 |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||| Sbjct 1252 AATGCTTTGCTGGGCTTTGGAGCTTGGATGACTCAGAAATTGTCAAGCAGGCTATCGAAA 1311 Query 1292 AACCCGGATTGTTCGTTATGAAGCCTCAGAGAGAAGGCGGAGGAAACAACATCTATGGAG 1351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1312 AACCCGGATTGTTTGTTATGAAGCCTCAGAGAGAAGGCGGAGGAAACAACATCTATGGAG 1371 Query 1352 ATGATGTGAGGGAAAATCTTTTGAGACTGCAGAAAGAAGGAAAGGACGGAAACGCTGCGT 1411 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 1372 ATGATGTGAGGGAAAATCTTTTGAGACTGCAGAAAGAAGGAGAGGAAGGAAACGCTGCGT 1431 Query 1412 ATATCCTGATGCAGAGGATATTCCCAAAGGTCTCAAACATGTTCTTGGTGCGAGAAGGCG 1471 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1432 ATATCCTGATGCAGAGGATATTCCCAAAAGTCTCAAACATGTTCTTGGTGCGAGAAGGCG 1491 Query 1472 TTTACCATAAAAATCAAGTTATATCAGAACTTGGTGTCTATGGTGCTTACCTCAGGAACA 1531 |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| || Sbjct 1492 TTTACCATAAGCATCAAGCTATATCAGAACTCGGTGTCTATGGTGCTTACCTCAGGAGCA 1551 Query 1532 AAGAC-AACGTTATAGTTAACGAGCAGAGTGGTTATCTAATGCGCACAAAGATCG-AGTC 1589 ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct 1552 AAGACGAA-GTTATAGTAAACGAGCAGAGTGGTTATCTAATGCGCACGAAGATCGCA-TC 1609 Query 1590 ATCAGATGAAGGCGGCGTTGCAGCTGGTTTTGGAGTCTTGGACAGCATTTATCTGAATTG 1649 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 1610 ATCAGATGAAGGCGGCGTTGCAGCTGGTTTTGGAGTCTTGGACAGCATATATCTGATTTG 1669 Query 1650 AGATGAATCACATGCACAACCATCCTGATCAATCTTTCTGCTGGTTCGTTCCTTTTTGTT 1709 ||||| || |||| |||||||||| |||||| | ||||| |||||| |||||| || || Sbjct 1670 AGATGGATAACATTCACAACCATCTTGATCAGTTTTTCTTCTGGTTTATTCCTTCTTCTT 1729 Query 1710 CTTCTTCTTGCTTGTTAAAGATTTGTGTATTAATTCATGAAGGTCAATAAGACTCTAGGC 1769 || ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| Sbjct 1730 CT-CTTCTTGCTTGTTAAAGATTTGTGTATTAAT-CATGAAGATCAATAAGACT--AGGC 1785 Query 1770 AAAGCTCTT-ACAATTCTTTCCATAGGACCGCAAAGCATACATTGCTTATTGTTATTTT- 1827 ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1786 AAAGCTCTTTACAATTCTTTCCACAGGACCGCAAAGCCTACATTGCTTATTGTTATTTTT 1845 Query 1828 AGACCGTGTGAGACGATCACTCGTTTA-A--GATCATGAATGGAATAAGA 1874 ||||||||||||| ||| ||||||||| | |||||||||| |||||||| Sbjct 1846 AGACCGTGTGAGATGATTACTCGTTTATAAAGATCATGAATTGAATAAGA 1895 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 92770607160 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5