BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489625 Length=1014 Score E Sequences producing significant alignments: (Bits) Value AT5G28020.1 | Symbols: CYSD2, ATCYSD2 | cysteine synthase D2 | ... 1539 0.0 AT5G28030.2 | Symbols: DES1 | L-cysteine desulfhydrase 1 | chr5... 1075 0.0 > AT5G28020.1 | Symbols: CYSD2, ATCYSD2 | cysteine synthase D2 | chr5:10026183-10028531 REVERSE LENGTH=1549 Length=1549 Score = 1539 bits (833), Expect = 0.0 Identities = 938/990 (95%), Gaps = 2/990 (0%) Strand=Plus/Plus Query 1 AGTTTCAGAAAACAGAACAACATGGAAGATCGGTGCTCGATAAAGAACGATGTCACTGAA 60 |||||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||| Sbjct 345 AGTTTCAGAAAACAGACCAACATGGAAGATCGGTGCTTGATCAAGAACGATATCACTGAA 404 Query 61 TTGATTGGTAACACACCAATGGTGTATCTGAACAATGTTGTTGATGGTTGCGTGGCTCGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 TTGATTGGTAACACACCAATGGTGTATCTGAACAATGTTGTTGATGGTTGCGTGGCTCGT 464 Query 121 ATCGCTGCAAAGCTTGAGATGATGGAGCCTT-TCTCTAGTGTCAAAGACAGAATCGCGTA 179 |||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 465 ATCGCTGCGAAGCTTGAGATGATGGAGCCTTGT-TCTAGCGTCAAAGACAGAATCGCGTA 523 Query 180 TAGTATGATCAAAGATGCAGAGGAGAAAGGATTGATTACTCCCGGAAAGAGTACATTGAT 239 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 524 TAGTATGATCAAAGATGCAGAAGACAAAGGATTGATTACTCCCGGAAAGAGTACATTGAT 583 Query 240 TGAGCCAACGGCTGGTAACACCGGGATTGGTTTAGCCTGTGTCGGAGCTGCAAGAGGCTA 299 |||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct 584 AGAGCCAACTGCTGGTAACACCGGGATTGGTTTAGCTTGCATGGGAGCTGCAAGAGGCTA 643 Query 300 TAAAGTGATCCTTGTGATGCCTTCAACTATGAGTTTAGAGAGAAGAATCATCCTTAAGGC 359 ||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||| Sbjct 644 TAAAGTGATCCTTGTGATGCCTTCAACTATGAGCTTAGAGAGAAGAATCATTCTGAGGGC 703 Query 360 ATTAGGTGCAGAGCTTCATCTCTCAGAACAGCGGATAGGCCTTAAAGGAATGTTGGAGAA 419 | |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct 704 ACTAGGTGCAGAGCTTCATCTCTCGGACCAGCGCATAGGCCTTAAAGGAATGTTGGAGAA 763 Query 420 AACCGAAGCGATATTAAGCAAAACTCCTGGTGGTTACATTCCACAGCAGTTTGAAAATCC 479 ||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 764 AACTGAAGCGATTTTAAGCAAAACTCCTGGTGGTTACATTCCACAACAATTTGAAAATCC 823 Query 480 TGCAAACCCCGAGATTCATTACCAAACCACGGGACCGGAAATATGGAGAGATTCAGCTGG 539 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 824 TGCAAACCCCGAGATTCATTACCGAACCACGGGACCGGAAATATGGAGAGATTCAGCCGG 883 Query 540 GAAAGTTGATATATTGGTTGCTGGTGTAGGGACTGGTGGAACAGCTACTGGAGTAGGGAA 599 |||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 884 GAAAGTAGATATATTGGTCGCTGGCGTAGGGACTGGTGGAACTGCTACTGGAGTAGGGAA 943 Query 600 GTTCCTCAAGGAGAAGAATAAAGATATTAAGGTTTGTGTGGTGGAACCAGAAGAAAGTCC 659 ||||||||||||| |||| ||||| || |||||||||||||||||||||| ||||||||| Sbjct 944 GTTCCTCAAGGAGCAGAACAAAGACATCAAGGTTTGTGTGGTGGAACCAGTAGAAAGTCC 1003 Query 660 GGTACTGAGCGGAGGTCAACCAGGTCCACATTTGATCCAGGGAATTGGCTCTGGTATCGT 719 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1004 GGTACTTAGCGGAGGTCAACCAGGTCCACATTTGATTCAGGGAATTGGCTCTGGTATCGT 1063 Query 720 CCCATTCAATTTGGACTTAACCATTGTTGATGAAATTATTAAAGTGACAGGTGAAGAAGC 779 |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 1064 CCCATTCAATTTGGACTTAACCATTGTTGATGAAATTATTCAAGTGGCAGGTGAAGAGGC 1123 Query 780 TATTGAAACAGCCAAGCTTCTTGCCCTCAAAGAAGGATTATTGGTGGGAATATCCTCTGG 839 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1124 TATTGAAACAGCCAAGCTTCTTGCCCTCAAAGAAGGATTACTGGTGGGAATATCCTCTGG 1183 Query 840 AGCCGCAGCAGCGGCTGCGTTAAAGGTTGCAAAGCGGCCAGAAAACACAGGAAAACTCAT 899 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 1184 AGCCGCAGCAGCGGCTGCGTTAAAGGTTGCAAAGCGGCCAGAAAACGCGGGGAAACTCAT 1243 Query 900 TGCGGTGGTTTTTCCCAGTGGGGGAGAACGTTATTTATCGACTAAACTGTTCGATTCGGT 959 || |||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | Sbjct 1244 TGTGGTGGTTTTTCCTAGTGGAGGAGAACGTTATTTATCGACTAAACTGTTCGATTCGAT 1303 Query 960 TAGATATGAAGCAGAGAATTTGCCTATTGA 989 |||||||||||||||||||||||||||||| Sbjct 1304 TAGATATGAAGCAGAGAATTTGCCTATTGA 1333 > AT5G28030.2 | Symbols: DES1 | L-cysteine desulfhydrase 1 | chr5:10030406-10032451 REVERSE LENGTH=1107 Length=1107 Score = 1075 bits (582), Expect = 0.0 Identities = 853/984 (87%), Gaps = 17/984 (2%) Strand=Plus/Plus Query 9 AAA-ACAGAA-CAACATGGAAGATCG-GTGCTCGATAAAGAACGATGTCACTGAATTGAT 65 ||| ||| || |||||||||||| || || || ||| ||||||||||||||||||||||| Sbjct 35 AAAGACA-AACCAACATGGAAGACCGCGT-CTTGATCAAGAACGATGTCACTGAATTGAT 92 Query 66 TGGTAACACACCAATGGTGTATCTGAACAATGTTGTTGATGGTTGCGTGGCTCGTATCGC 125 ||||||||||||||||||||||| || || |||| |||||||| ||||||||||| || Sbjct 93 AGGTAACACACCAATGGTGTATCTAAATAAAATTGTGGATGGTTGTGTGGCTCGTATTGC 152 Query 126 TGCAAAGCTTGAGATGATGGAGCCTTTCTCTAGTGTCAAAGACAGAATCGCGTATAGTAT 185 ||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||||||| Sbjct 153 TGCCAAGCTTGAGATGATGGAGCCTTGCTCTAGCATCAAAGATAGAATCGCATATAGTAT 212 Query 186 GATCAAAGATGCAGAGGAGAAAGGATTGATTACTCCCGGAAAGAGTACATTGATTGAGCC 245 |||||||||||| || || ||||||||||||||||| ||||||||||||||||||||| | Sbjct 213 GATCAAAGATGCTGAAGACAAAGGATTGATTACTCCGGGAAAGAGTACATTGATTGAGGC 272 Query 246 AACGGCTGGTAACACCGGGATTGGTTTAGCCTGTGTCGGAGCTGCAAGAGGCTATAAAGT 305 ||||| ||||||||||||||||||||||||| | |||| ||| ||||||| |||||||| Sbjct 273 AACGGGTGGTAACACCGGGATTGGTTTAGCCAGCATCGGGGCTTCAAGAGGTTATAAAGT 332 Query 306 GATCCTTGTGATGCCTTCAACTATGAGTTTAGAGAGAAGAATCATCCTTAAG-GCATTAG 364 ||||||| ||||||||||||| ||||||||||| || |||||||| | |||| ||||||| Sbjct 333 GATCCTTTTGATGCCTTCAACAATGAGTTTAGAAAGGAGAATCATTC-TAAGAGCATTAG 391 Query 365 GTGCAGAGCTTCATCTCTCAGAACA-GCGGATAGGCCTTAAAGGA-ATGTTGGAGAAAAC 422 |||||||| |||||||| | | ||| | |||||| |||||||| | |||||||||| | Sbjct 392 GTGCAGAGGTTCATCTCACTG-ACATTAGCATAGGCATTAAAGGACA-GTTGGAGAAAGC 449 Query 423 CGAAGCGATATTAAGCAAAACTCCTGGTGGTTACATTCCACAGCAGTTTGA-AAATCCTG 481 ||| |||||||||||||||||| ||||||||||| ||||| |||||| | ||||||| Sbjct 450 TAAAGAGATATTAAGCAAAACTCCCGGTGGTTACATACCACACCAGTTT-ATTAATCCTG 508 Query 482 CAAACCCCGAGATTCATTACCA-AACCACGGGACCGGAAATATGGAGAGATTCAGCTGGG 540 ||| || ||||||||||| | ||||||||| ||||| || |||||||||||||| ||| Sbjct 509 AAAATCCAGAGATTCATTA-TAGAACCACGGGTCCGGAGATTTGGAGAGATTCAGCAGGG 567 Query 541 AAAGTTGATATATTGGTTGCTGGTGTAGGGACTGGTGGAACAGCTACTGGAGTAGGGAAG 600 ||||| ||||| || || || ||||| || ||||||||||| | ||||||| ||||||| Sbjct 568 AAAGTAGATATCTTAGTCGCCGGTGTTGGAACTGGTGGAACGGTTACTGGAACAGGGAAG 627 Query 601 TTCCTCAAGGAGAAGAATAAAGATATTAAGGTTTGTGTGGTGGAACCAGAAGAAAGTCCG 660 || || || || ||||| ||||||||||||||||||||||||||||| |||||| || Sbjct 628 TTTCTTAAAGAAAAGAACAAAGATATTAAGGTTTGTGTGGTGGAACCTTCCGAAAGTGCG 687 Query 661 GTACTGAGCGGAGGTCAACCAGGTCCACATTTGATCCAGGGAATTGGCTCTGGT-ATCGT 719 ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||| | | Sbjct 688 GTACTCAGCGGAGGAAAACCAGGTCCACATTTGATCCAAGGAATAGGCTCTGGTGAAATT 747 Query 720 CCCATTCAATTTGGACTTAACCATTGTTGATGAAATTATTAAAGTGACAGGTGAAGAAGC 779 || | |||||||||||||| ||||||||||||||| ||| ||||||| ||||| ||||| Sbjct 748 CC-AGCCAATTTGGACTTAAGCATTGTTGATGAAATCATTCAAGTGACTGGTGAGGAAGC 806 Query 780 TATTGAAACAGCCAAGCTTCTTGCCCTCAAAGAAGGATTATTGGTGGGAATATCCTCTGG 839 |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct 807 TATTGAAACAACCAAGCTTCTTGCTATCAAAGAAGGATTATTGGTTGGAATATCCTCTGG 866 Query 840 AGCCGCAGCAGCGGCTGCGTTAAAGGTTGCAAAGCGGCCAGAAAACACAGGAAAACTCAT 899 |||| |||| ||||||||||||||||||||||||||||| |||||| ||| |||||||| Sbjct 867 AGCCTCAGCTGCGGCTGCGTTAAAGGTTGCAAAGCGGCCTGAAAACGTAGGGAAACTCAT 926 Query 900 TGCGGTGGTTTTTCCCAGTGGGGGAGAACGTTATTTATCGACTAAACTGTTCGATTCGGT 959 || ||| ||||||| ||||| ||||||||||||||||||||| || ||||||| || || Sbjct 927 TGTGGTTATTTTTCCTAGTGGAGGAGAACGTTATTTATCGACTGAATTGTTCGAGTCAGT 986 Query 960 TAGATATGAAGCAGAGAATTTGCC 983 ||||||||||| ||||||||||| Sbjct 987 CAGATATGAAGCTGAGAATTTGCC 1010 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49681571383 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5