BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489780
Length=3277
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08850.1 | Symbols: | Leucine-rich repeat receptor-like pro... 4975 0.0
AT1G35710.1 | Symbols: | Protein kinase family protein with le... 857 0.0
> AT4G08850.1 | Symbols: | Leucine-rich repeat receptor-like protein
kinase family protein | chr4:5636489-5640636 REVERSE
LENGTH=3482
Length=3482
Score = 4975 bits (2694), Expect = 0.0
Identities = 3118/3317 (94%), Gaps = 51/3317 (2%)
Strand=Plus/Plus
Query 1 AATAATTAAAGAAAGAATTCAAGATATTGACTTATTTGTCATCTATTAACAAGTGACAAC 60
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 AATAATTAAAGAGAGAATTCAAGATATTGACTTATTTGTCCTCTATTAACAAGTGACAAC 60
Query 61 CCATAGTCAACTATCACGGACTAGTCAACGAAATCAATTTTCCAGTTTATAAAAGACGGT 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 61 CCATAGTCAACTATCACGGACTAGTCAACGAAATCAATTTT-CAGTTTATAAAAGACCGT 119
Query 121 --AGAGATAATCTGCAACTGTATGAACAAAACAAACCCAGCAAACAAAAAACAATTCACT 178
|||||||||||||||||||||||||||||||||||||| ||| ||||| | |||||
Sbjct 120 AGAGAGATAATCTGCAACTGTATGAACAAAACAAACCCAG-AAA-GAAAAA-TA-TCACT 175
Query 179 AA-C-C--TC--AGA-A-AA-----TG----G---A---TCGTGATCTTCAAGTTCTTTT 215
|| | | || ||| | || || | | |||||||||||||||||||||
Sbjct 176 AACCTCATTCAAAGAGAGAATGGCTTGTAAAGAAAAGCCTCGTGATCTTCAAGTTCTTTT 235
Query 216 GATCATATCTATAGTTTTGAGCTGTTCTCTTGCTGTTTCCGCAACCGTTGAAGAAGCTAA 275
||||||||||||||||||||| |||||| |||||||||| ||||| || |||||||||||
Sbjct 236 GATCATATCTATAGTTTTGAGTTGTTCTTTTGCTGTTTCTGCAACGGTGGAAGAAGCTAA 295
Query 276 TGCTCTTTTGAAATGGAAGTCGACTTTCACAAACCAGACAAGTTCTTCAAAGCTTTCTTC 335
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 296 TGCTCTTTTGAAATGGAAGTCAACTTTCACAAACCAGACAAGTTCATCAAAGCTATCTTC 355
Query 336 TTGGGTCAATCCAAACACAAGCAGCTTCTGTACCAGTTGGTATGGTGTTTCCTGCTTACG 395
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct 356 TTGGGTCAATCCAAACACAAGCAGCTTTTGTACCAGTTGGTATGGTGTTGCCTGCTCACT 415
Query 396 CGGGAGCATTGTACGGTTGAATCTTACGAATACCGGTATCAAAGGTACTTTCGAGGATTT 455
|||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 416 CGGGAGCATTATACGGTTGAATCTTACTAATACCGGTATCGAAGGTACTTTCGAAGATTT 475
Query 456 TCCATTCTCGTCTCTACCCAATCTCACTTATGTTGATCTAAGCATGAACCTTTTCTCTGG 515
||||||||||||||| ||||||||||||| ||||||||| || ||||||| |||||||||
Sbjct 476 TCCATTCTCGTCTCTCCCCAATCTCACTTTTGTTGATCTCAGTATGAACCGTTTCTCTGG 535
Query 516 AACGATCTCTCCTCTATGGGGACGGTTCTCGAAACTCGTGTACTTCGATTTGTCGATTAA 575
||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 536 AACCATCTCTCCTTTATGGGGACGGTTCTCGAAACTCGAATACTTCGATTTGTCGATTAA 595
Query 576 TCAGTTAGTTGGTGAAATCCCACCTGAGCTTGGTGATTTGAGTAACTTAGGTACTCTCCA 635
|||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 596 CCAGTTAGTTGGTGAAATCCCACCTGAACTTGGTGATTTGAGTAATTTAGATACTCTCCA 655
Query 636 TCTTGTTGAAAACAAGTTAAACGGATCGATTCCTTCTGAAATCGGTCGGTTAACTAAGGT 695
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 656 TCTAGTTGAAAACAAGTTAAACGGATCGATTCCTTCTGAGATCGGTCGGTTAACTAAGGT 715
Query 696 TACGGAGATAGCTATGTACGACAATCTTTTAACCGGACCAATACCTTCTTCTTTTGGAAA 755
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 TACGGAGATAGCTATATACGACAATCTTTTAACCGGACCAATACCTTCTTCTTTTGGAAA 775
Query 756 CCTTACCAAACTTGTTAATCTCTACCTCTTTATCAATTCTCTTTCTGGTTCAATTCCTTC 815
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 776 CCTTACCAAACTAGTTAACCTCTACCTCTTTATCAATTCTCTTTCTGGTTCAATTCCTTC 835
Query 816 TGAAATAGGAAACCTACCCAACCTTAAAGAGCTATGTCTAGATAGGAACAACCTTACCGG 875
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 836 TGAAATAGGAAACTTACCCAACCTTAGAGAGCTATGTCTAGATAGGAACAACCTTACCGG 895
Query 876 TAAAATCCCTTCCAGTTTTGGAAATTTGAAGAATGTAACTCTTCTCAATATGTTTGAAAA 935
|||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 896 TAAAATCCCTTCTAGTTTCGGGAATTTGAAGAATGTAACTCTTCTCAATATGTTTGAAAA 955
Query 936 TCAGCTCTCTGGTGAAATCCCTCCTGAGATTGGTAATATGACCGCTTTAGATACTCTTAG 995
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 956 TCAGCTCTCTGGTGAAATCCCTCCTGAGATTGGTAATATGACCGCTTTAGATACACTTAG 1015
Query 996 CCTCCACACAAATAAGCTTACCGGTTCAATACCTTCTACCTTAGGAAACATCAAAACCCT 1055
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1016 TCTCCACACAAATAAGCTTACCGGTCCAATACCTTCTACCTTAGGAAACATCAAAACCCT 1075
Query 1056 AGCCATTCTTCATCTTTACCTGAATCAGCTCAGTGGTTCGATTCCACCGGAACTAGGC-A 1114
|||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
Sbjct 1076 AGCCGTTCTTCATCTTTACCTGAATCAACTCAATGGTTCGATTCCACCGGAACTAGGCGA 1135
Query 1115 ACATGGAAGCAATGATTGATTTGGAGATAAGTGAGAACAAACTCACTGGTCCTGTTCCTG 1174
| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1136 A-ATGGAATCAATGATTGATTTGGAGATAAGTGAGAACAAACTCACCGGTCCTGTTCCCG 1194
Query 1175 ATTCTTTTGGCAAGTTAACCGTGTTGCAATGGTTATTCCTCCGTGATAACCAGCTTTCTG 1234
||||||||||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||
Sbjct 1195 ATTCTTTTGGCAAGTTAACCGCGTTGGAATGGTTGTTCCTACGTGATAATCAGCTCTCTG 1254
Query 1235 GTCCCATCCCACCGGGCATTGCTAACTCTACAGAGCTCAGCGTCCTGCAACTAGACACCA 1294
|||||||||||||||| |||||||||||||||||||||| ||||||||| || |||||||
Sbjct 1255 GTCCCATCCCACCGGGAATTGCTAACTCTACAGAGCTCACCGTCCTGCAGCTCGACACCA 1314
Query 1295 ACAACTTCACTGGTTTCTTGCCTGATACTATCTGTAGAGGTGGCAAGCTTGAGAATCTTA 1354
|||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1315 ACAACTTCACCGGTTTCTTGCCTGATACCATCTGTAGAGGTGGAAAGCTTGAGAATCTTA 1374
Query 1355 CGCTAGATGATAATCACTTCGAGGGTCCTATTCCTAAAAGCTTGAGAAATTGCAAGAGCT 1414
|||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct 1375 CGCTAGATGATAATCACTTCGAAGGTCCTGTTCCTAAAAGCTTGAGAGATTGCAAGAGCT 1434
Query 1415 TGGTCAGAGTAAGATTCAAAGGGAACCA-TTTCTCCGGAGATATCTCTGAGGCTTTCGGA 1473
|| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1435 TGATCAGAGTAAGATTCAAAGGGAAT-AGTTTCTCCGGAGATATCTCTGAGGCTTTCGGA 1493
Query 1474 GTTTACCCGACTCTCAACTTCATTGATCTCAGCAACAACAACTTTCATGGGCAACTTTCA 1533
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1494 GTTTACCCGACTCTCAACTTCATCGATCTCAGCAACAACAACTTTCATGGACAACTTTCA 1553
Query 1534 GCCAACTGGGAACAAAGTACAAA-GCTGGTTGCATTCATCCTCTCAAACAACAGCATCAG 1592
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1554 GCCAACTGGGAACAAAGT-CAAAAGCTGGTTGCATTCATCCTCTCAAACAACAGCATCAC 1612
Query 1593 TGGAGCCATCCCACCTGAGATTTGGAACATGGCACAGCTCAGTCAACTCGATCTATCTTT 1652
||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct 1613 TGGAGCCATCCCACCTGAGATTTGGAACATGACACAGCTAAGTCAGCTCGATCTATCTTC 1672
Query 1653 CAACCGTATCACCGGCGAGCTACCTGAATCAATCAGCAATATCAACCGTACATCAAAACT 1712
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1673 CAACCGCATCACCGGCGAGCTACCTGAATCAATCAGCAATATCAACCGTATATCAAAACT 1732
Query 1713 CCAACTCAACGGGAATCAGCTATCTGGCAAAATCCCTTCAGGAATCAGTCTCTTAACCAA 1772
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1733 CCAACTCAACGGGAATCGGCTATCAGGCAAAATCCCTTCAGGAATCAGACTCTTAACCAA 1792
Query 1773 TCTTGAGTATCTTGATCTATCCTCAAACCGATTCGGGTTC-GAGAT-CCCTGCAACTCTC 1830
|||||||||||||||||||||||||||||||||| | ||| || || ||| |||| |||
Sbjct 1793 TCTTGAGTATCTTGATCTATCCTCAAACCGATTCAG-TTCCGAAATACCCC-CAACGCTC 1850
Query 1831 AACAATTTTCCAAGGCTCTATTACATGAACCTGAGCAGAAACGACTTGGATCAAACCATC 1890
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AACAATTTGCCAAGGCTCTACTACATGAACCTGAGCAGAAACGACTTGGATCAAACCATC 1910
Query 1891 CCCGAGGGATTAACGAAGCTGTCTCAGTTACAAATGCTGGATCTCAGCTACAATCAGCTC 1950
|| ||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1911 CCGGAGGGGTTAACAAAGCTATCTCAGTTACAAATGCTTGATCTCAGCTACAATCAGCTC 1970
Query 1951 GACGGAGAGATCTCATCACAGTTCGGCTCTTTACAAAACCTCGAAAGACTCGACCTCTCA 2010
|||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct 1971 GACGGAGAGATCTCATCACAATTCAGATCTTTACAAAACCTCGAAAGACTCGACCTCTCA 2030
Query 2011 CACAACAATCTCTCAGGTCAAATCCCACCAAGTTTGAAAGATATGCTAGCACTAACATAC 2070
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 2031 CACAACAATCTCTCAGGTCAAATCCCACCAAGTTTCAAAGATATGCTAGCACTAACACAC 2090
Query 2071 ATCGATGTATCACACAACAACCTCCAAGGTCCAATTCCAGATAACGCAGCGTTCCGAAAC 2130
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2091 GTCGATGTATCACACAACAACCTCCAAGGTCCAATTCCAGATAACGCAGCGTTTCGAAAC 2150
Query 2131 GCATCTCCAAACGCATTGGAAGGTAACAACGACTTATGTGGT-GA-T-AACA--A-A--- 2181
||| ||||| | || || ||||||||||| |||||||||||| | | |||| | |
Sbjct 2151 GCACCTCCAGATGCTTTTGAAGGTAACAAAGACTTATGTGGTAGTGTTAACACCACACAA 2210
Query 2182 GCCTTGAAGCCATGTTCAATCACATCCTCCAAGAAATCACACAAGGATCGAAACCTAATC 2241
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2211 GGCTTGAAGCCATGTTCAATCACATCCTCAAAGAAATCACACAAGGATCGAAACCTAATC 2270
Query 2242 ATCTACATACTAGTTCCAATCATCGGAGCAATCATAATCCTCTCCGTCTGCGCCGGAATC 2301
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2271 ATCTACATACTAGTTCCGATCATCGGAGCAATCATAATCCTCTCCGTCTGCGCCGGAATC 2330
Query 2302 TTCATCTGTTTCCGTAAAAGAACCAAACAAATCGAAGAAAACT-CAGATTCAGAATCCGG 2360
|||||||||||||||||| |||| ||||||||||| || | | ||||||||||||| ||
Sbjct 2331 TTCATCTGTTTCCGTAAACGAACAAAACAAATCGAGGAGCA-TACAGATTCAGAATCAGG 2389
Query 2361 AGGAGAAACATTATCAATCTTCAGCTTCGACGGAAAAGTCCGATACCAAGAAATCATCAA 2420
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2390 AGGAGAAACATTATCAATCTTCAGCTTCGACGGCAAAGTCCGATACCAAGAGATCATCAA 2449
Query 2421 AGCAACAGGAGAATTCGATTCAAAATACCTAATCGGAACCGGAGGACACGGCAAAGTCTA 2480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2450 AGCAACAGGAGAATTCGATCCAAAATACCTAATCGGAACCGGAGGACACGGCAAAGTCTA 2509
Query 2481 CAAAGCAAAGCTACCAAACGCAATCATGGCGGTGAAAAAGCTAAACGAAACAACAGACTC 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2510 CAAAGCAAAGCTACCAAACGCAATCATGGCGGTGAAAAAGCTAAACGAAACAACAGACTC 2569
Query 2541 ATCAATCACAAATCCATCAACAAAACAAGAGTTTCTCAACGAAATCAGAGCACTAACCGA 2600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2570 ATCAATCTCAAATCCATCAACAAAACAAGAGTTTCTCAACGAAATCAGAGCACTAACCGA 2629
Query 2601 GATCCGTCACCGGAACGTCGTGAAACTCTTCGGATTCTGCTCGCACCGCCGCAACACGTT 2660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2630 GATCCGTCACCGGAACGTCGTGAAACTCTTCGGATTCTGCTCGCATCGCCGCAACACGTT 2689
Query 2661 TCTGGTTTACGAGTACATGGAGAGAGGAAGCTTGAGGAAAGTTTTGGAGAATGATGAAGA 2720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2690 TCTGGTTTACGAGTACATGGAGAGAGGAAGCTTGAGGAAAGTTTTGGAGAATGATGATGA 2749
Query 2721 AGCGAAGAAGTTAGATTGGGGAAAGAGGATCAATGTTGTGAAAGGTGTGGCTCATGCGTT 2780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2750 AGCGAAGAAGTTAGATTGGGGAAAGAGGATCAACGTTGTGAAAGGTGTGGCTCATGCTTT 2809
Query 2781 GTCGTATATGCATCATGATCGGTCTCCGGCGATTGTTCACCGTGATATTAGTAGCGGGAA 2840
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2810 GTCTTATATGCATCATGATCGGTCTCCGGCGATTGTTCACCGTGATATTAGTAGTGGGAA 2869
Query 2841 TATTCTTCTCGGTGAGGATTATGAAGCGAAGATCTCTGATTTTGGTACTGCGAAGCTTCT 2900
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2870 TATTCTTCTCGGCGAGGATTATGAAGCGAAGATCTCTGATTTTGGTACTGCGAAGCTTCT 2929
Query 2901 TAAACCGGATTCTTCGAATTGGTCCGCCGTTGCTGGTACTTACGGTTATGTTGCTCCAGA 2960
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2930 TAAACCGGATTCTTCAAATTGGTCCGCCGTTGCTGGTACTTACGGCTATGTTGCTCCAGA 2989
Query 2961 ACTAGCATACGCAATGAAAGTGACTGAGAAATGCGATGTGTATAGCTTTGGAGTTCTAAC 3020
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2990 ACTAGCTTATGCGATGAAAGTGACTGAGAAATGCGATGTGTATAGCTTTGGAGTTCTAAC 3049
Query 3021 ACTTGAAGTGATCAAAGGAGAGCATCCGGGAGATCTAGTTTCAACTCTTTCATCATCTCC 3080
||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct 3050 ACTTGAAGTGATCAAAGGAGAGCATCCAGGAGATCTAGTTTCAACTCTTTCATCCTCACC 3109
Query 3081 TCCGGACACATCTCTGTCATTGAAAAGCATTTCCGACCACCGGCTACCGGAACCGACGCC 3140
||| || || |||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 3110 TCCCGATGCAACTCTGTCACTGAAAAGCATTTCCGACCACCGGCTACCGGAACCGACACC 3169
Query 3141 GGAGACTAAAGAGGAGGTCTTAGAGATTTTGAAAGTTGCACTTATGTGCTTACATTCTGA 3200
||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 3170 GGAGATTAAAGAGGAGGTCTTAGAGATTTTGAAAGTTGCACTTTTGTGTTTACATTCTGA 3229
Query 3201 TCCACAAGCTCGCCCAACAATGCTCTCAATCTCCACTGCCTTTTCTTAAGAACTTGTCCC 3260
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 3230 TCCACAAGCTCGCCCAACAATGCTCTCTATCTCCACTGCCTTTTCTTAAGAACTTGTCTC 3289
Query 3261 TTCTCTGAGTCTCTCTA 3277
|||||||| ||||||||
Sbjct 3290 TTCTCTGACTCTCTCTA 3306
> AT1G35710.1 | Symbols: | Protein kinase family protein with
leucine-rich repeat domain | chr1:13220940-13224681 FORWARD
LENGTH=3658
Length=3658
Score = 857 bits (464), Expect = 0.0
Identities = 1732/2323 (75%), Gaps = 171/2323 (7%)
Strand=Plus/Plus
Query 1012 CTTACCGGTTCAATACCTTCTACCTTAGGAAA-CATCAA-AACCCTAGCCAT-TCTTCAT 1068
|||||||||||||| |||||| |||| ||||| | |||| || || | | | |||| ||
Sbjct 1132 CTTACCGGTTCAATTCCTTCTTCCTTCGGAAATC-TCAAGAA--CTTGACGTATCTTTAT 1188
Query 1069 CTTTACCTGAATCAGCTCAGTGGT-TCGATTCCACC-GGAACTAGGCAACATGGAAGCAA 1126
|||||||||||| | | | |||| || ||||| || ||| ||||||||||||||| | |
Sbjct 1189 CTTTACCTGAATTATTTAACTGGTGTC-ATTCC-CCAGGAGCTAGGCAACATGGAATCCA 1246
Query 1127 TGATTGATTTGGAGATAAGTGAGAACAAACTCACTGGTCCTGTTCCTGATTCTTTTGGCA 1186
|||| |||| || ||||| |||||||||| || ||| ||||||||||||| ||||| |
Sbjct 1247 TGATCAATTTAGATTTAAGTCAGAACAAACTTACAGGTTCTGTTCCTGATTCCTTTGGTA 1306
Query 1187 AGTTAACCGTGTTGCAATGGTTATTCCTCCGTGATAACCAGCTTTCTGGTCCCATCCCAC 1246
| || ||| | || || | || | ||| |||| |||||| || |||||| | ||||| |
Sbjct 1307 ACTTTACCAAGCTGGAAAGTTTGTACCTTCGTGTTAACCACCTCTCTGGTGCGATCCCGC 1366
Query 1247 CGGGCA-TTGCTAACTCTACAGAGCTCAGCGT-CC-TGCA-ACTAGACACCAACAACTTC 1302
| || | | || |||||| || | || | | | || || | ||| |||||||||||||||
Sbjct 1367 CAGG-AGTAGCAAACTCTTCACATCT-AAC-TACCTTG-ATACTTGACACCAACAACTTC 1422
Query 1303 ACTGGTTTCTTGCCTGATACTATCTGTAGAGGT-GGCAAGCTTGAGAATCT-TACGCTAG 1360
||||||||||| ||||| ||| | || | |||| || |||||| | ||| | | | | |
Sbjct 1423 ACTGGTTTCTTTCCTGAAACTGTTTGCAAAGGTAGG-AAGCTTCAAAATATCT-CATTGG 1480
Query 1361 ATGATAATCACTTCGAGGGTCCTATTCCTAAAAGCTTGAGAAATTGCAAGAGCTTGGTCA 1420
|| | |||||| |||| |||||||| || |||||||||||| ||||||||||| || |||
Sbjct 1481 ATTACAATCACCTCGAAGGTCCTATCCCGAAAAGCTTGAGAGATTGCAAGAGCCTGATCA 1540
Query 1421 GAGTAAGA-TTCAAAGGGAACCATTTCTCCGGAGATATCTCTGAGGC-TTTCGGAGTTTA 1478
||| |||| ||| ||| ||| | ||| | || ||||| | ||| || ||| ||| ||||
Sbjct 1541 GAGCAAGATTTC-TAGGAAACAAATTCACTGGCGATATTTTTGAAGCTTTTGGGA-TTTA 1598
Query 1479 CCC-GACTCTCAACTTCATTGATCTCAGCAACAACAACTTTCATGG-GCA-ACTTTC-AG 1534
||| ||| || |||||||||||| ||||| ||||||| || || || | | | |||| ||
Sbjct 1599 CCCAGAC-CTTAACTTCATTGATTTCAGCCACAACAAATTCCACGGTG-AGA-TTTCTAG 1655
Query 1535 CCAACTGGGAACAA-AGTACAAAGCT-GGTTGCATTCATCCTCTCAAACAACAGCATCA- 1591
|||||||| | || ||| ||||||| || ||| || ||| | |||||||||| |||||
Sbjct 1656 -CAACTGGG-AGAAGAGTCCAAAGCTAGG-TGCCTTGATCATGTCAAACAACAACATCAC 1712
Query 1592 GTGGAGCCATCCCACCTGAGATTTGGAACATGGCACAGCTCAG-TCAACTCGATCTATCT 1650
| || || |||||| | ||||||||||||||| |||| || || | | || |||||||||
Sbjct 1713 G-GGTGCTATCCCAACAGAGATTTGGAACATGACACAACT-AGTTGAGCTGGATCTATCT 1770
Query 1651 TTCAACCGTATCACCGGCGAGCTACCTGAATCAATCAGCAATATCAACCG--TACATCAA 1708
|||| || || || || || ||| |||| | ||| || | || | || |
Sbjct 1771 ACCAACAACCTCTTTGGTGAACTTCCAGAAGCAATTGGAAATCTC-A-CGAATTTGTCGA 1828
Query 1709 AACTCCAACTCAACGGGAATCAGCTATCTGGCAA-AATCCCTTCAGGAATCAGTCTCTTA 1767
|| | ||| || ||||||||| ||||||| || | | ||| |||| | ||| |||||
Sbjct 1829 GGCTACGACTTAATGGGAATCAGTTATCTGG-AAGAGTTCCTGCAGGTTTAAGTTTCTTA 1887
Query 1768 ACCAATCTTGAGTATCTTGATC-TATCCTCAAACCGA-TTCGGGTTC-GAGATCCCTGC- 1823
||||||||||||| |||||| | |||||||||| | | ||| | || |||||||| |
Sbjct 1888 ACCAATCTTGAGTCTCTTGA-CTTATCCTCAAA-CAATTTC-AGCTCAGAGATCCC-ACA 1943
Query 1824 AA-CTCTCAAC-AATTTTCCAAGGC-TCTATTACATGAACCTGAGCAGAAACGACTTGGA 1880
|| || | || |||| || || || || |||||||||||||||||||| | || ||
Sbjct 1944 AACCT-TTGACTCCTTTT-TAAAGCTTC-ATGACATGAACCTGAGCAGAAACAAATTCGA 2000
Query 1881 TC-AAACCA-TCCCCGAGGGATTAACGAAGCTGTCTCAGTT-AC-AAATGCTGGATCTCA 1936
| || || ||||| || || | |||||| ||||||| || || || |||||||
Sbjct 2001 -CGGAAGCATTCCCC----GACTATCAAAGCTGACTCAGTTAACGCAA--CTTGATCTCA 2053
Query 1937 GCTACAATCAGCTCGACGGAGAGATCTCATCACAGTTCGGCTCTTTACAAAACCTCGA-A 1995
|| |||| |||||||||||||| ||| ||||||| | |||| | |||| |||||| |
Sbjct 2054 GCCACAACCAGCTCGACGGAGAAATCCCATCACAACTAAGCTCCCTGCAAAGCCTCGACA 2113
Query 1996 AGACTCGACCTCTCACACAACAATCTCTCAGGTCAAATCCCACCAAGTTT-GAAAGATAT 2054
|| ||||||||||||||||||||||||||||||| || ||| ||| ||| || | ||
Sbjct 2114 AG-CTCGACCTCTCACACAACAATCTCTCAGGTCTCATTCCAACAACTTTCGAGGGC-AT 2171
Query 2055 GCTAGCACTAAC-ATACATCGATGTATCACACAACAACCTCCAAGGTCCAATTCCAGATA 2113
| |||| || || | || ||||| ||||| |||| || ||| ||||||| |||||||||
Sbjct 2172 GATAGCGCTGACGA-ACGTCGATATATCAAACAATAAACTCGAAGGTCCGCTTCCAGATA 2230
Query 2114 ACGC-AGCGTTCCGAAACGCATCTCCAAACGCATTGGAAGGTAA-CA-ACGACTTATGTG 2170
| | | |||| ||||| ||| | || | |||||||| || || || | | ||||||
Sbjct 2231 -CTCCAACGTTTCGAAAAGCAACAGCAGATGCATTGGA-GGAAAACATAGG-CTTATGCA 2287
Query 2171 GTGATA-----A--CAAAGCCTTGAAGCCATGTTCAATCACATCCTCCAAGAAATC-ACA 2222
|| ||| | ||||| ||||| ||||| | | | | | |||||| | | |
Sbjct 2288 GTAATATTCCTAAACAAAGA-TTGAAACCATGC-CG-TGAG-T--TG-AAGAAACCGA-A 2339
Query 2223 CAAGGATCGAAACCTAATCATCTACATACTAGTTCCAATCATCGGAGCAATCATAATCCT 2282
|| || | ||||| | | | ||| |||| |||||| | |||| | || | || ||
Sbjct 2340 GAAAAATGGCAACCTTGTTGTGTGGATATTAGTGCCAATCCTAGGAGTACTCGTCATTCT 2399
Query 2283 CTCCGTCTGCGCCGGA-ATC-TTCA--T-CTGT-TTCCGTAAAAGAAC-CAAACAAA-TC 2334
||| | || || | | | |||| | ||| ||| | ||| ||| | | |||| |
Sbjct 2400 CTCTATATGTGCAA-ACA-CATTCACCTACTGCATTCGG-AAACGAAAACTA-CAAAATG 2455
Query 2335 GAAGAAAACTCAGATTCAGAATCCGGAGGAGAAACATTATCAATCTTCAGC-TTCGACGG 2393
||||||| | ||||| | ||| | |||| |||| || || || |||||| || || ||
Sbjct 2456 GAAGAAA-CACAGATCCTGAAACAGGAG-AGAAT-ATG-TCCATATTCAGCGTT-GATGG 2510
Query 2394 AAAAGTCCGATACCAAGAAATCATCAAAGCAACAGGA-GAATTCGATTCAAAATACCTAA 2452
||| || ||||||||| |||||| || ||||| | ||||||||| ||| | |||| |
Sbjct 2511 CAAATTCAAATACCAAGATATCATCGAATCAACAA-ACGAATTCGATCCAACACACCTCA 2569
Query 2453 TCGGAACCGGAGGACACGGCAAAGTCTACAAAGCAAAGCTACCAA-ACGCAATCATGGCG 2511
|||||||||||||| || |||||||||||| |||||| || |||| | ||||||| ||
Sbjct 2570 TCGGAACCGGAGGATACAGCAAAGTCTACAGAGCAAACCT-CCAAGATACAATCATAGCC 2628
Query 2512 GTGAAAA-AGCTAAACGAAACAACAGACTCATCA-ATCA-CAAATCCA-TCAACAAAACA 2567
|| ||| | ||| | || |||| |||| | | || | |||| ||| | || ||
Sbjct 2629 GTTAAACGA-CTACATGACACAATAGACGAAG-AGAT-ATCAAAGCCAGTTGTGAAG-CA 2684
Query 2568 AGAGTTTCTCAACGAAATCAGAGCACTAACCGAGATCCGTCACCGGAACGTCGTGAAACT 2627
|||||| || ||||| | | |||| |||| |||||||||||||| ||||| ||||| ||
Sbjct 2685 AGAGTTCCTAAACGAGGTAAAAGCATTAACAGAGATCCGTCACCGCAACGTTGTGAAGCT 2744
Query 2628 CTTCGGATTCTGCTCGCACCGCCGCAACACGTTTCTGGTTTACGAGTACATGGAGAGAGG 2687
|||||| |||||||| ||||||||| |||| |||||| | |||||||||||||| | |||
Sbjct 2745 CTTCGGCTTCTGCTCCCACCGCCGCCACACATTTCTGATCTACGAGTACATGGAAAAAGG 2804
Query 2688 AAGCTTGAGGAAAGTTTTGGAGAATGATGAAGAAGCGAAGA-AGTTAGATTGGGG-AAAG 2745
||| || | ||| | || | || || |||||||| ||| | | | |||| |||
Sbjct 2805 AAGTTTAAACAAACTCTTAGCCAACGACGAAGAAGCTAAGCGACTCAC-TTGGACCAAA- 2862
Query 2746 AGGATCAATGTTGTGAAAGGTGTGGCTCATGCGTTGTCGTATATGCATCATGATCGG-TC 2804
|||||||| || ||||||||||||||||| || || ||||||||||| ||||| || |
Sbjct 2863 AGGATCAACGTCGTGAAAGGTGTGGCTCACGCTTTATCGTATATGCACCATGACCGAATA 2922
Query 2805 TC-CGGCGATTGTTCACCGTGATATTAGTAGCGGGAATATTCTTCTCGGTGAGGATTATG 2863
| | |||| ||||||||||||||||| ||||| || || ||||||| | | |||||
Sbjct 2923 ACAC--CGATCGTTCACCGTGATATTAGCAGCGGAAACATCCTTCTCGATAACGATTAC- 2979
Query 2864 A-AGCGAAGATCTCTGATTTTGGTACTGCGAAGCTTCTTAA-ACCGGATTCTTCGAATTG 2921
| ||| |||||||| ||||||||||| || || ||||| || || |||||| || || ||
Sbjct 2980 ACAGCTAAGATCTCCGATTTTGGTACAGCAAAACTTCTAAAGAC-GGATTCATCAAACTG 3038
Query 2922 GTCCGCCGTTGCTGGTACTTACGGTTATGTTGCTCCAGAACTAGCATACGCAATGAAAGT 2981
||||||||||||||| || ||||| || ||||| ||||| | || ||| | ||||| ||
Sbjct 3039 GTCCGCCGTTGCTGGAACCTACGGCTACGTTGCACCAGAGTTTGCTTACACGATGAAGGT 3098
Query 2982 GACTGAGAAATGCGATGTGTATAGCTTTGGAGTTCTAACACTTGAAGTGATCAAA-GG-A 3039
||| ||||||||||||||||||||||| || ||| | | ||| ||| |||| || || |
Sbjct 3099 GACGGAGAAATGCGATGTGTATAGCTTCGGGGTTTTGATACTCGAATTGAT-AATTGGGA 3157
Query 3040 GAGCATCCGGGAGATCTAGTTTCAACTCTT-TCATCATCTCCTCCGGACACATCTCTGTC 3098
| |||||||||||| | || || | | || || || ||||| ||| | | |||||||
Sbjct 3158 AA-CATCCGGGAGATTTGGTATCGAGT-TTGTCTTCGTCTCCA--GGAGA-AGCTCTGTC 3212
Query 3099 ATTGAA-AAGCATTTCCGACCACCG-GCTACCGGAACCGACGCCGGAGACTAAAGAG-GA 3155
| || |||||||||||| | || | || ||||| ||| || ||| ||| || ||
Sbjct 3213 GCT-AAGAAGCATTTCCGATGAACGTG-TATTAGAACC-ACG--GG-GACAAAATAGAGA 3266
Query 3156 G--G-TCTTAGA-GATTTTG-AAAGTTGCACTTAT-GTGCTTACATTCTGATCCACAAGC 3209
| | |||| || ||| || ||| | || |||| ||| ||||| | ||||| || |
Sbjct 3267 GAAGCTCTT-GAAGATGGTGGAAA-TGGCT-TTATTGTGTTTACAAGCAAATCCAGAATC 3323
Query 3210 TCGCCCAACAATGCTCTCAATCTCCACTGCCTTTTCTTAAGAA 3252
||| ||||| ||| | |||||||||||| | |||||||| |||
Sbjct 3324 TCGGCCAACGATGTTGTCAATCTCCACTACATTTTCTTA-GAA 3365
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 163042564750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5