BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489848 Length=1335 Score E Sequences producing significant alignments: (Bits) Value AT4G10030.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1288 0.0 AT4G10020.1 | Symbols: AtHSD5, HSD5 | hydroxysteroid dehydrogen... 261 1e-68 > AT4G10030.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:6270241-6273241 REVERSE LENGTH=1535 Length=1535 Score = 1288 bits (697), Expect = 0.0 Identities = 844/912 (93%), Gaps = 21/912 (2%) Strand=Plus/Plus Query 1 GTAATGTCGGCGGTATCTTGCTCCACGGCGAGCTCTAGCGGCGGATGTGGAATTAGGTTT 60 |||||||||||||| || |||||||||||||| |||||||| ||||||| | |||||||| Sbjct 141 GTAATGTCGGCGGTCTCGTGCTCCACGGCGAGTTCTAGCGGAGGATGTGCATTTAGGTTT 200 Query 61 CAATCAAAGACATTTGCTTCATCAGCAAAAACCCATTCTCCTAATCTCATCAGAATCGGG 120 | ||||||| | ||| | || ||||||||||||| |||||||||| ||| Sbjct 201 CGATCAAAG--A-------CAT---C---AATCCATTCTCCTAATTTCATCAGAATTGGG 245 Query 121 CCTAATTCTCAGAGTGACAGATTCTGT-ATGCATCGTTTGGAATTGGTACATGGAACTCC 179 | |||||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct 246 ACAAATTCTCAGAGTGACAGATTCTGTAAT-CATCGTTTGGAATTGGTACATGGAACT-C 303 Query 180 G-AAAGTCAGAGGAACATCTATACGTATGGCATTGGTTGATGAGAGACAATCAACGAGTA 238 | ||||| | |||| ||||| ||||||||||||| ||||| ||||||||||||||||| | Sbjct 304 GTAAAGTGAAAGGAGCATCTGTACGTATGGCATTAGTTGAGGAGAGACAATCAACGAGCA 363 Query 239 AAGATTTTGCTGAGCCTCCTCGGATTCTGGCGTATGATCTTGTTCAAGGGGCACTTGTGA 298 ||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||| Sbjct 364 AAGATGTTGCTGAGCCTCCTCGGGTCCTGGCGTATGATCTTGTTCAAGGAGCACTTGTGA 423 Query 299 AATGGAGATGGAAGGATGACAAATCTGTTCCAGATACACCTACCGCTGTTCTCTTACACG 358 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 424 AATGGAGATGGAAGGATGACAAATCTGTTCCAGATACACCTACTGCTGTTCTCCTACACG 483 Query 359 GAATTCTAGGGAGCGGGAAAAACTGGGGCACTTTTGCCCGAAGATTGGCTCATGAGTTCC 418 ||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct 484 GAATTTTAGGGAGCGGGAAAAACTGGGGCACTTTTGCTCGTAGATTGGCTCATGAATTCC 543 Query 419 CAACTTGGCAGTTTCTCTTGGTAGATCTTCGTTGCCATGGGGATTCAGCATCTCTCAAGA 478 |||| ||||||||||| |||||||| || |||||||||||||||||| |||||||||||| Sbjct 544 CAACGTGGCAGTTTCTATTGGTAGACCTGCGTTGCCATGGGGATTCAACATCTCTCAAGA 603 Query 479 AGAGAGGTCCACACTCTGTTGCTACAACAGCTTCTGATGTTCTAAAACTTGTTGGTCAGT 538 |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 604 AGAGAGGTCCACACTCGGTTGCTACTACTGCTTCTGATGTTCTAAAACTTGTTGGTCAGT 663 Query 539 TGAGGTTAACACCTCGGGTCCTTGTTGGTCATAGCTTTGGGGGGAAAGTTGTATTAAGCA 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 664 TGAGGTTAACACCTCGGGTCCTTGTTGGTCATAGCTTTGGGGGGAAAGTTGTATTAAGCA 723 Query 599 TGGTGGAACAAGCAGCTAAGCCTCTTCCAAGACCAGTCCGGGCTTGGGTATTGGATGCTA 658 |||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct 724 TGGTAGAGCAAGCAGCTAAGCCTCTTCCACGACCAGTCCGAGCTTGGGTATTGGATGCTA 783 Query 659 CTCCTGGAAAAGTTCGTGCAGGAGGAGATGGAGAAGATCATCCACGAGAGCTTATATCAT 718 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 784 CTCCTGGTAAAGTTCGTGCAGGAGGAGATGGAGAAGATCATCCACGAGAGCTTATATCAT 843 Query 719 TTCTACGTAAATTGCCAAAAGTGGTCTTGTCAAAGCGCGAGGTTCTTAAAGCTCTTATAA 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 844 TTCTACGTAAATTGCCAAAAGTGGTCTTGTCAAAGCGCGAGGTTCTTAAAGCTCTTATAA 903 Query 779 ATGAAGGGTTTTCCAATGATGTCGCGCAGTGGGTCATTACCAATCTCAAACCTACTGGAC 838 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 904 ATGAAGGGTTTTCCAATGATGTCGCACAGTGGGTCATTACCAATCTCAGACCTACTGGAC 963 Query 839 CATCGGCTTCTAGCTTCTCGTGGACATTTGACCTAGACGGGATCGCTGAACTTTACCAAA 898 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 CATCAGCTTCTAGCTTCTCGTGGACATTTGACCTAGACGGGATCGCTGAACTTTACCAG- 1022 Query 899 TCTTCC-AAGAG 909 |||| | ||||| Sbjct 1023 TCTTACGAAGAG 1034 Score = 545 bits (295), Expect = 3e-154 Identities = 421/475 (89%), Gaps = 36/475 (8%) Strand=Plus/Plus Query 897 AATCTTCCAAGA-G-GTACATGTGAATTTTCTGAAAGCGGAAAGAAGCTTGCACCGTTGG 954 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1059 AATCTTCCAAGAGGAGTACATGTGAATTTTCTGAAAGCGGAAAGAAGCTTGCACCGTTGG 1118 Query 955 GCCCTAAAAGACCTTCAGCGAATCCACGCCGCTGAAGAGCTAGCCTCTGAAGAAGGCGGT 1014 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1119 GCCCTAGAAGACCTTCAGCGAATCCACGCCGCTGAAGAGCTAGCCTCTGAAGAAGGCGGT 1178 Query 1015 GGCGTAGAAATGCATGTCCTGGAAGATGCCGGTCATTGGGTTCACACAGATAACCCGGAT 1074 || ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1179 GGTGTAGAAATGCATGTCTTGGAAGATGCCGGTCATTGGGTTCACACGGATAACCCGGAT 1238 Query 1075 GGTCTCTTCAGGATCTTGTCATCTTCTTTCCAGGTTCTCAGAGCCTAGTGGTGCTGAACG 1134 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1239 GGTCTCTTCAGGATCTTGTCATCTTCTTTCCAGGTTCTCAGAGCCTAGAGGTGCTGAACG 1298 Query 1135 --Ctt--tt----t-ttGTT-T----AATACTTGTG-ACAT-TT-G----A----CAGAT 1169 ||| || | || || | |||||||||| | | || | | ||| | Sbjct 1299 GTCTTGGTTCGGCTCTTTTTCTGTGTAATACTTGTGGAGAAGTTAGGTCTAAAAACAGTT 1358 Query 1170 G-CA-ATA---T--CATATACATCAACATTGTGTCCGTGTAATGTTTTGTGTGACATAAG 1222 | || ||| | |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1359 GACAGATACAATATCATATACATCAACACTGTGTCCGTGTAATGTTCTGTGTGACATAAG 1418 Query 1223 TAATTAAGAAGTAGCATCATATGGCTGTATCATCCGGCATTATTCTTTACTCGATGTCCT 1282 ||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 1419 TAATTCAGAAGTAACATCATATGGCTGTATCATCCGGTATTATTCTTGACTCGATGTCCT 1478 Query 1283 TTACATTGCTTTTCTTTTT--GTCGTTCACTTAGTCGGAGAAAGTTCTAAAGCTC 1335 ||||||||||||||||||| || |||||||| ||| |||||||||||||||||| Sbjct 1479 TTACATTGCTTTTCTTTTTTTGTGGTTCACTTGGTCAGAGAAAGTTCTAAAGCTC 1533 > AT4G10020.1 | Symbols: AtHSD5, HSD5 | hydroxysteroid dehydrogenase 5 | chr4:6268289-6270434 FORWARD LENGTH=1499 Length=1499 Score = 261 bits (141), Expect = 1e-68 Identities = 168/181 (93%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 1157 ACATTTGACAGATGCAATATCATATACATCAACATTGTGTCCGTGTAATGTTTTGTGTGA 1216 ||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 1488 ACAGTTGACAGATACAATATCATATACATCAACACTGTGTCCGTGTAATGTTCTGTGTGA 1429 Query 1217 CATAAGTAATTAAGAAGTAGCATCATATGGCTGTATCATCCGGCATTATTCTTTACTCGA 1276 ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||| Sbjct 1428 CATAAGTAATTCAGAAGTAACATCATATGGCTGTATCATCCGGTATTATTCTTGACTCGA 1369 Query 1277 TGTCCTTTACATTGCTTTTCTTTTT--GTCGTTCACTTAGTCGGAGAAAGTTCTAAAGCT 1334 ||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||| Sbjct 1368 TGTCCTTTACATTGCTTTTCTTTTTTTGTGGTTCACTTGGTCAGAGAAAGTTCTAAAGCT 1309 Query 1335 C 1335 | Sbjct 1308 C 1308 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65712513405 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5