BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489869 Length=827 Score E Sequences producing significant alignments: (Bits) Value AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superf... 1013 0.0 > AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfamily protein | chr4:6370343-6371291 FORWARD LENGTH=949 Length=949 Score = 1013 bits (548), Expect = 0.0 Identities = 601/627 (96%), Gaps = 2/627 (0%) Strand=Plus/Plus Query 106 TTTGGTTTCAACCTTCTTCAAGAAAAT-CAAACCACTAACCATGATGAAGCATTTGCTAA 164 ||||||||||||||||| ||| |||| |||| ||||||||||||||||||| ||||||| Sbjct 155 TTTGGTTTCAACCTTCTACAA-TAAATCCAAATCACTAACCATGATGAAGCACTTGCTAA 213 Query 165 GCATCTTCTTCATAGGAGCTTTGTTACTTGGAAACATCAAAACAAGTGAAGGATCTTTGT 224 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 214 GCATCTTCTTCATAGGAGCTTTGTTGCTTGGAAACATCAAAACAAGTGAAGGGTCTTTGT 273 Query 225 CTTCTGCACTTGAAACTACTCCAGGCAGCTTGCTATCTGATCTCTGGCTAGACCGGTTCC 284 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 274 CTTCTGCACTTGAAACTACTCCAGGCAGCTTGCTATCCGATCTCTGGCTAGACCGGTTCC 333 Query 285 CTGATCCATTCAAGATCTTGGAGAGAATCCCATTAGAACTCGAGAGGGACACGAGTGTGG 344 |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| Sbjct 334 CTGATCCATTCAAGATCTTGGAGAGAATCCCATTAGGACTCGAGAGGGACACAAGCGTGG 393 Query 345 CTCTGTCTCCAGCGAGAGTAGACTGGAAAGAAACAGCAGAAGGGCATGAGATAATGCTCG 404 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394 CTCTGTCTCCAGCAAGAGTAGACTGGAAAGAAACAGCAGAAGGGCATGAGATAATGCTCG 453 Query 405 ATATCCCCGGTTTAAAGAAGGATGAAGTAAAGATAGAAGTGGAGGAGAACCGAGTTTTGC 464 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 454 ATATCCCCGGTTTGAAGAAGGATGAAGTAAAGATAGAAGTGGAGGAGAACGGAGTTTTAC 513 Query 465 GAGTCAGTggagagaggaaaagagaagaagagaagaaaggagatcaatggcatagagtgg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 GAGTCAGTGGAGAGAGGAAAAGAGAAGAAGAGAAGAAAGGAGATCAATGGCATAGAGTGG 573 Query 525 agagaTCATATGGAAAGTTCTGGAGACAGTTCAAGCTACCTGATAATGTGGATACGGAAT 584 |||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| Sbjct 574 AGAGATCATATGGAAAATTCTGGAGACAGTTCAAGCTACCTGATAATGTAGATATGGAAT 633 Query 585 CAGTCAAGGCCAAGCTAGAGAATGGTGTGCTTACTATTAACCTCACAAAACTATCTCCTG 644 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct 634 CAGTCAAGGCCAAGCTTGAGAATGGTGTGCTCACTATTAACCTCACGAAACTATCTCCTG 693 Query 645 AAAAGGTCAAGGGTCCAAGGGTTGTTAACATTGCAGCTGAAGAAGACCAAACTGCAAAAA 704 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 694 AAAAAGTTAAGGGTCCAAGAGTTGTTAACATTGCAGCTGAAGAAGACCAAACTGCAAAAA 753 Query 705 TCAGCTCTTCTGAATCCAAGGAACTCT 731 ||||||||||||||||||| ||||||| Sbjct 754 TCAGCTCTTCTGAATCCAAAGAACTCT 780 Score = 137 bits (74), Expect = 1e-31 Identities = 100/111 (90%), Gaps = 7/111 (6%) Strand=Plus/Plus Query 2 TCTCTGCAAAACTCTAGC---A-AAAGATATTTCAAGAAACTTCTTCATTCTTCATACAA 57 |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 14 TCTCTGCAAAACTCTACCAAAAGAAAGATATTTCAAGAAACTTCTTCATTCTTCATACAA 73 Query 58 TGTGTAT-ATATA--CACCAGAGAATTGAGACTTATCTTCATAGAAAACAA 105 ||||||| ||||| |||||||||||||||||| | | ||||||||||||| Sbjct 74 TGTGTATTATATATACACCAGAGAATTGAGACTAACCATCATAGAAAACAA 124 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40287785894 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5