BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490418 Length=735 Score E Sequences producing significant alignments: (Bits) Value AT4G01600.1 | Symbols: | GRAM domain family protein | chr4:693... 1158 0.0 > AT4G01600.1 | Symbols: | GRAM domain family protein | chr4:693181-694340 FORWARD LENGTH=752 Length=752 Score = 1158 bits (627), Expect = 0.0 Identities = 701/737 (95%), Gaps = 4/737 (1%) Strand=Plus/Plus Query 1 CATCACCATTATGTCTACTAGCATGAGTCCGCAATACAAGGATGTGAACGATAAATTAGA 60 ||||| ||||| ||||| || |||| |||| |||||||| || ||||||||||||||||| Sbjct 8 CATCATCATTAGGTCTAATATCATGCGTCCACAATACAAAGACGTGAACGATAAATTAGA 67 Query 61 CTCGACGGCTAAGCACAAAACCAACAGCCATGGCGGTCGTTATAG-TAATCCTTACGTCC 119 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 68 CTCGACGGCCAAGCACAAAACCAACAGCCATGGCGGTCGTTAT-GATAATCCTTACGTCC 126 Query 120 ACATTACTACTCCCACATCAGCTTCTGATAAGAGGTCGAAGGATAAGGTTCTTGAGGTGT 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 ACATTACTAGTCCCACATCAGCTTCTGATAAGAGGTCGAAGGATAAGGTTCTTGAGGTGT 186 Query 180 TGAATCGGTGTGGGAAGAAAGTAGAGGACGTTACTCGCAAAGCGGAAGCTTTAGCT-AGC 238 ||||||| |||||||||||||||||||||| |||||||||||||||||| |||| | | Sbjct 187 TGAATCGCTGTGGGAAGAAAGTAGAGGACGCTACTCGCAAAGCGGAAGCATTAG-TCGGA 245 Query 239 GGTTTAAAAGACCACCTGAAGTTTAGTCCTAGCATAAGTGATGCAGCAATGGCTAGGCTT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 GGTTTAAAAGACCACCTGAAGTTTAGTCCTAGCATAAGTGATGCAGCAATGGCTAGGCTT 305 Query 299 TCTCAAGGCACTAAAATGATCGTTGAAGGAGGCCCAGAGAGAGTGTTTCAACGAGAGTTT 358 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 306 TCTCAAGGCACTAAGATGATCGTTGAAGGAGGACCAGAGAGAGTGTTTCAACGAGAGTTT 365 Query 359 GATGTTTTAGCTGCAGAGATACTTTTAGATTCGTTTGTTTGCTACATATCGACTACTTCG 418 | ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 366 GGTGTTTTAGCTGTAGAGAAACTTTTAGATTCGTTTGTTTGCTACATATCGACTACTTCG 425 Query 419 GGACCAGTGACCGGAGTGATATACATTTCCAACAGAAGAATCGCTTTTTGTAGCGACTAT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 GGACCAGTGACCGGAGTGATATACATTTCCAACAGAAGAATCGCTTTTTGTAGCGACTAT 485 Query 479 GCCATTCGTCTTCCTTCTTCTGTCGGTGGAAACGGTGTTGCGGCATACTACAAGGTGGTG 538 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 486 GCCATTCGTCTTCCTTCTTCTGCCGGTGGAAACGGTGTTGCGGCATATTACAAGGTGGTG 545 Query 539 ATGGAGTGGGAGAAGATACGTAGCATTAGTTCATCAACGAACGTGTTGAAGCCAAGTCAA 598 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 546 ATGGAGTGGGAGAAGATAAGTAGCATTAGTTCATCAACGAACGTGTTGAAGCCAAGTGAG 605 Query 599 AGGTATGTGCATATGGTGACACAAGATGGGTTTGAGTTTTGGTTCATGGGCTTTGTCTCC 658 || || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 606 AGATACGTGCATATGGTGACACGAGATGGGTTTGAGTTTTGGTTCATGGGCTTTGTCTCC 665 Query 659 TACATCGATGCTTTCAATTGTCTCAACAAAGCTCTCCTTAATTCCCGTTGTGGTCGTGCC 718 |||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| Sbjct 666 TACATCGATGCTTTCAATTGTCTCAACAAAGCTCTCCTCAATTCCCGTTGTAATCATGCC 725 Query 719 ATGTAATCAAATTCTAA 735 ||||||||||||||||| Sbjct 726 ATGTAATCAAATTCTAA 742 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35666244370 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5