BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490563 Length=1347 Score E Sequences producing significant alignments: (Bits) Value AT4G00040.1 | Symbols: | Chalcone and stilbene synthase family... 2043 0.0 AT1G02050.1 | Symbols: LAP6 | Chalcone and stilbene synthase fa... 863 0.0 > AT4G00040.1 | Symbols: | Chalcone and stilbene synthase family protein | chr4:14627-16079 FORWARD LENGTH=1366 Length=1366 Score = 2043 bits (1106), Expect = 0.0 Identities = 1247/1316 (95%), Gaps = 5/1316 (0%) Strand=Plus/Plus Query 1 TTCACTGTGACCTTAAAAAGATGTTGGCGTCCGCAAGGGTAGAGAAACAAAAGCGTGTTG 60 |||| ||||| || | ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7 TTCATTGTGAACTCACAAAGATGTTGGTGTCCGCAAGGGTAGAGAAACAAAAGCGTGTTG 66 Query 61 CATATCAGGGGAAAGCAACACTGCTTGCTCTCGGTAAGGCCTTCCCCAGCAATGTTGTTT 120 | ||||||||||| || ||| |||||||||||||||||||||| || ||||||||||||| Sbjct 67 CTTATCAGGGGAAGGCGACAGTGCTTGCTCTCGGTAAGGCCTTGCCGAGCAATGTTGTTT 126 Query 121 CCCAGGAGAATCTCGTGGAGGATTATCTCCGTGAAATCAAATGTGATGACCTTTCTATCA 180 |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct 127 CCCAGGAGAATCTCGTGGAGGAGTATCTCCGTGAAATCAAATGCGATAACCTTTCTATCA 186 Query 181 AAGACAAGCTGCAACACTTGTGTAAAAGCACAACTGTCAAGACACGCTACACAGTCATGT 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 187 AAGACAAGCTGCAACACTTGTGCAAAAGCACAACTGTCAAGACACGCTACACAGTCATGT 246 Query 241 CTCGTGAGACGCTGCAAAAATACCCTGAACTAGCAATCGAGGGTTCCCCAACCATCAAAC 300 | || ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 247 CACGGGAGACGCTGCACAAATACCCTGAACTAGCAACCGAGGGTTCCCCAACCATCAAAC 306 Query 301 AGAGGCTTGAGATTGCAAACGAAGCGGTTGTGCAGATGGCATATGAAGCGAGCTTGGTTT 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 307 AGAGGCTTGAGATTGCAAACGATGCGGTTGTGCAGATGGCATATGAAGCGAGCTTGGTTT 366 Query 361 GCATCAAGGAATGGGGAAGGGCAGTGGAAGATATCACTCATCTAGTCTATGTTTCCTCCA 420 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 367 GCATCAAGGAATGGGGAAGGGCAGTGGAAGATATCACTCATCTTGTCTACGTTTCCTCCA 426 Query 421 GTGAGTTCCGTTTGCCCGGAGGTGACCTCTACCTCTCGACACAGCTGGGCCTTAGCAACG 480 ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| Sbjct 427 GTGAGTTCCGTTTGCCCGGAGGTGATCTTTACCTCTCGGCACAGCTGGGCCTTAGCAACG 486 Query 481 AGGTTCAGAGAGTGATGCTGTATTTTCTGGGATGCTATGGAGGTTTGAGCGGGCTGCGCG 540 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 487 AGGTTCAGAGAGTGATGCTGTATTTTCTTGGATGCTATGGAGGTTTGAGTGGGCTGCGCG 546 Query 541 TGGCTAAAGACATTGCCGAGAACAACCCAGGGAGCCGGGTGCTGCTCACCACCTCCGAGA 600 |||| ||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 547 TGGCCAAAGACATTGCTGAGAACAACCCAGGGAGCCGTGTGTTGCTCACCACCTCTGAGA 606 Query 601 CTACGGTTCTGGGGTTCCGCCCGCCCAACAAAGCTCGCCCTTACGACTTAGTCGGGGCTG 660 |||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| Sbjct 607 CTACCGTTCTGGGGTTCCGCCCACCCAACAAAGCTCGTCCTTACAACTTAGTCGGGGCTG 666 Query 661 CACTGTTTGGAGACGGAGCAGCTGCTCTAATCATCGGAGCTGACCCTAGAGAGTCTGAAT 720 |||| |||||||| ||||||||||| || ||||||||||| ||||||| |||||| |||| Sbjct 667 CACTCTTTGGAGATGGAGCAGCTGCCCTGATCATCGGAGCAGACCCTACAGAGTCGGAAT 726 Query 721 CTCCCTTCATGGAGCTTCACTGTGCTCTGCAGCAGTTCCTTCCCCAAACACAGGGGGTGA 780 |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 727 CTCCTTTCATGGAGCTTCACTGTGCTATGCAGCAGTTCCTGCCCCAAACACAGGGGGTGA 786 Query 781 TCGACGGGAGGCTGTCAGAAGAGGGAATAAGCTTCAAGCTAGGAAGAGACCTCCCTCAGA 840 |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 787 TCGACGGGCGGCTGTCAGAAGAGGGCATAACCTTCAAGCTAGGAAGAGACCTCCCTCAGA 846 Query 841 AGATCGAAGACAACGTGGAGGAGTTCTGCAAGAAGCTGGTGGCAAAGGCTGGCTCTGGTT 900 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 847 AGATCGAAGACAACGTGGAGGAGTTCTGCAAGAAGCTAGTGGCAAAGGCTGGCTCTGGTG 906 Query 901 CGTTGGAGTTGAATGACCTTTTCTGGGCAGTTCATCCGGGTGGACCAGCCATCCTGAGCG 960 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 907 CGTTGGAGTTGAATGACCTTTTCTGGGCAGTTCATCCTGGTGGACCAGCCATCCTGAGCG 966 Query 961 GGCTGGAGACAAAGCTGAAGCTGAAGCCGGAAAAGCTGGAATGCAGCAGAAGGGCGTTGA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 967 GGCTGGAGACAAAGCTGAAGCTGAAGCCGGAAAAGCTGGAATGCAGCAGAAGGGCGTTGA 1026 Query 1021 TGGATTATGGGAACGTAAGCAGCAACACCATCTTCTACATAATGGACAAAGTAAGAAATG 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 1027 TGGATTATGGGAACGTAAGCAGCAACACCATCTTCTACATAATGGACAAAGTCAGAGATG 1086 Query 1081 AGCTTGAGAAGAAAGGCACAGAGGGAGAAGAGTGGGGTCTGGGCTTAGCTTTCGGACCGG 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1087 AGCTTGAGAAGAAAGGCACAGAGGGAGAAGAGTGGGGTCTGGGCTTAGCTTTCGGACCGG 1146 Query 1141 GAATCACTTTCGAAGGCTTTCTCATGAGGAGCCTCTAAATGTCTATGAACCGGACATTTT 1200 |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| Sbjct 1147 GAATCACTTTCGAAGGCTTTCTCATGAGGAACCTCTAAATGTATATGAACTGGACATTT- 1205 Query 1201 CTAAACAAATAAAATATTCAGGAACCGATGCCAACACACATACATGATACATGGAATGGT 1260 || |||||||||||||| ||||||||||||| ||||||||||||| |||| |||||| Sbjct 1206 CTCAACAAATAAAATATACAGGAACCGATGCTAACACACATACAT----CATGTAATGGT 1261 Query 1261 TGCATTAGTTTTGTTCTTCAATGGTAAATCATAGAAATGCATCAATACAGTAAGTT 1316 |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| Sbjct 1262 TGCATTAGTTTTGTTCTTTAATGGTAAATCACAGAAATACATCAATACAGTAAGTT 1317 > AT1G02050.1 | Symbols: LAP6 | Chalcone and stilbene synthase family protein | chr1:359117-360518 REVERSE LENGTH=1312 Length=1312 Score = 863 bits (467), Expect = 0.0 Identities = 914/1127 (81%), Gaps = 41/1127 (4%) Strand=Plus/Plus Query 70 GGAAA-GCAACACTGCTTGCTCTCGGTAAGGCCTTCCCCAG-CAATGTTGTTTCC-CAGG 126 ||||| ||||||||||||||||| || || |||||||| || ||| || | |||| |||| Sbjct 147 GGAAAGGCAACACTGCTTGCTCTTGGCAAAGCCTTCCCAAGCCAA-GTCG-TTCCTCAGG 204 Query 127 AGAATCTCGTGG-AGGATTATCTCCGTGAAATCAAATGTGATGAC-CTTTCTATCAAAGA 184 ||||||| |||| |||||| ||| || || | ||||||||||||| | || ||||||||| Sbjct 205 AGAATCTAGTGGAAGGATT-TCTACGAGACACCAAATGTGATGACGCGTT-TATCAAAGA 262 Query 185 CAAGCTGCAACACTTGTGTAAAAGC-ACAACTGTCAAGACACGCTACACAGTCATGTCTC 243 |||||| |||||||||| |||| | ||||| || ||||| || ||||| || || | | Sbjct 263 AAAGCTGGAACACTTGTGCAAAA-CGACAACCGTGAAGACGCGATACACTGTGTTGACGC 321 Query 244 GTGAGACGCT-GCAAAAATACCCTGAACTAGCAATC-GAGGGTTCCCCAACCATCAAACA 301 | |||| || || ||||||||||| ||| ||| | |||||||| ||||| ||||| || Sbjct 322 GAGAGATACTGGC-TAAATACCCTGAGCTAACAA-CAGAGGGTTCACCAACAATCAAGCA 379 Query 302 GAGGCTTGAGATTGCAAACGAAGCGGTTGTGCAGATGGCATAT-GAAGCGAGCTT-GGTT 359 || ||||| ||||||||||| ||||||||| | ||||||| | ||||| || || || | Sbjct 380 AAGACTTGAAATTGCAAACGAGGCGGTTGTGGAAATGGCAT-TGGAAGCCAGTTTAGG-T 437 Query 360 TGCATCAAGGAATGGGGAAGGGCAGTGGAAGATATCACTCATC-TAGTCTATGTTTCCTC 418 ||||||||||||||||||||| |||||||||| |||||||| | | ||||| |||||||| Sbjct 438 TGCATCAAGGAATGGGGAAGGCCAGTGGAAGACATCACTCA-CATTGTCTACGTTTCCTC 496 Query 419 CAGTGAGTTCCGTTTGCCCGGAGGTGACCTCTACCTCTCGA-CACAGCTGGGCCTTAGCA 477 || ||| ||||||| ||||| |||||||| |||||||| | || |||| ||||| || | Sbjct 497 AAGCGAGATCCGTTTACCCGGTGGTGACCTTTACCTCTC-AGCAAAGCTAGGCCTGAGGA 555 Query 478 ACGAGGTTCAGAGAGTGATGCTGTATTTTCTGGGATGCTATGGAGGTTTGAGCGGGC-TG 536 | || || | ||||||||||||||||||||||||||||| |||||| ||| | ||| | Sbjct 556 ATGACGTGAACAGAGTGATGCTGTATTTTCTGGGATGCTACGGAGGTGTGA-CTGGCCTC 614 Query 537 CGCGTGGCTAAAGACATTGCCGAGAACAACCCAGGGAGCCGGGTGCTGCTCACCACCTCC 596 || ||||| ||||||||||| ||||||||||| || ||||| || |||||||| ||||| Sbjct 615 CGTGTGGCCAAAGACATTGCTGAGAACAACCCCGGAAGCCGTGTTCTGCTCACAACCTCT 674 Query 597 GAGACTACGGTTCTGGGGTTCCGCCCGCCCAACAAAGCTCGCCCTTACGACTTAGTCGGG 656 || || || |||| || || || || || |||||||| || || |||||| |||| || Sbjct 675 GAAACCACCATTCTCGGATTTCGGCCACCAAACAAAGCGCGTCCGTACGACCTAGTTGGA 734 Query 657 GCTGCACTGTTTGGAGACGGAGCAGCTGCTCTAATCATCGGAGCTGACCCTAGAGAGTCT 716 ||||| ||||||||||| || ||||||||| | ||||||||||||||||| ||||||| | Sbjct 735 GCTGCTCTGTTTGGAGATGGTGCAGCTGCTGTGATCATCGGAGCTGACCCGAGAGAGTGT 794 Query 717 GAATCTCCCTTCATGGAGCTTCACTGTGCTCTGCAGCAGTTCCTTCCCCAA-ACACAGGG 775 ||| |||| ||||||||||| |||| ||| | ||||||||| || || |||||| Sbjct 795 GAAGCTCCTTTCATGGAGCTGCACTATGCGGTTCAGCAGTTC-TTGCCGGGGACACAGAA 853 Query 776 GGTGATCGACGGGAGGCTGTCAGAAGAGGGAATAAGCTTCAAGCTAGGAAGAGACCTCCC 835 |||||||| |||||| || | || || || |||| ||||||||| ||| |||||||||| Sbjct 854 CGTGATCGAGGGGAGGTTGACTGAGGAAGGCATAAACTTCAAGCTTGGACGAGACCTCCC 913 Query 836 TCAGAAGATCGAAGACAACGTGGAGGAGTTCTGCAAGAAGCTGGTGGCAAAGGCTGGCTC 895 |||||||| || || ||| | || |||||||||||||||||| ||| |||||||||| Sbjct 914 GCAGAAGATAGAGGAGAACATAGAAGAGTTCTGCAAGAAGCTGATGGGAAAGGCTGGCGA 973 Query 896 TG-GTTCGTTGGAGTTGAATGACCTTTTCTGGGCAGTTCATCCGGGTGGACCAGCCATCC 954 || || || ||||||| |||||| | |||||||| |||||||| || ||||| || || | Sbjct 974 TGAGT-CGATGGAGTTCAATGACATGTTCTGGGCTGTTCATCCAGGAGGACCTGCGATTC 1032 Query 955 TGAGCGGGCTGGAGACAAAGCTGAAGCTGAAGCCGGAAAAGCTGGA-ATGCAGCAGAAGG 1013 ||| | | ||||||||||| ||||||||| || || |||||||| | ||||||||||| Sbjct 1033 TGAACCGTCTGGAGACAAAACTGAAGCTGGAGAAAGAGAAGCTGGAGA-GCAGCAGAAGG 1091 Query 1014 GCGTTGATGGATTATGGGAACGTAAGCAGCAACACCAT-CTTCTACATAATGGACAA-AG 1071 |||||| ||||||| |||||||| ||||||||||| || || || | ||||| | | Sbjct 1092 GCGTTGGTGGATTACGGGAACGTGAGCAGCAACACGATACTG-TATGTGATGGAGTATA- 1149 Query 1072 TAAGAAATGAGCTTGA-GAAGAAAGGC-ACAG-AGGGAGAAGAGTGGGGTCTGGGCTTAG 1128 | ||| ||||||| || ||||||||| || | || | |||||||||| || ||||||| Sbjct 1150 TGAGAGATGAGCT-GAAGAAGAAAGGTGAC-GCAGC-ACAAGAGTGGGGACTTGGCTTAG 1206 Query 1129 CTTTCGGACCGGGAATCACTTTCGAAGGCTTTCTCATGAGGAGCCTC 1175 |||||||||| |||||||| ||||||||| ||||||| | |||||| Sbjct 1207 CTTTCGGACCTGGAATCACCTTCGAAGGCCTTCTCATCCGCAGCCTC 1253 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66314919945 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5