BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490667
Length=1500
Score E
Sequences producing significant alignments: (Bits) Value
AT4G38970.1 | Symbols: FBA2 | fructose-bisphosphate aldolase 2 ... 2350 0.0
AT2G21330.1 | Symbols: FBA1 | fructose-bisphosphate aldolase 1 ... 1051 0.0
> AT4G38970.1 | Symbols: FBA2 | fructose-bisphosphate aldolase
2 | chr4:18163496-18165762 REVERSE LENGTH=1518
Length=1518
Score = 2350 bits (1272), Expect = 0.0
Identities = 1420/1488 (95%), Gaps = 24/1488 (2%)
Strand=Plus/Plus
Query 1 AAAAGAGGGAGGAGTGAGAGATAAGGGTGGTGTCATAAGCTTTTACTGTGAGTCTCTCAA 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 AAAAGAGGGAGGAGTGAGAGATAAGGGTGGTGTCATAAGCGTTTACTGTGAGTCTCTCAA 60
Query 61 AGAAACCAAAGGCAGAGAAAAGAGATAACACaaaaaaaaaaaaaTGGCATCAACCTCACT 120
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 61 AGAAACCAAAGGCAGAGAAAAGAGATAACACACACAAAAAAAAATGGCATCAACCTCACT 120
Query 121 CCTCAAGGCTTCTCCGGTGTTGGACAAATCCGAATGGGTCAAGGGACAAAGCGTTCTCTT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CCTCAAGGCTTCTCCGGTGTTGGACAAATCCGAATGGGTCAAGGGACAAAGCGTTCTCTT 180
Query 181 CCGTCAGCCTTCTTCCGCCTCCGTCGTCCTCCGCAACCGTGCCACCTCCCTCACCGTCCG 240
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCGTCAGCCTTCTTCCGCTTCTGTCGTCCTCCGCAACCGTGCCACCTCCCTCACCGTCCG 240
Query 241 TGCCGCTTCCTCCTACGCCGATGAGCTTGTTAAGACAGCGAAAACTATTGCGTCTCCGGG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 241 TGCCGCTTCCTCCTACGCCGATGAGCTTGTTAAGACAGCGAAAACTATTGCGTCTCCCGG 300
Query 301 ACGTGGAATCTTGGCGATGGACGAGTCGAACGCGACTTGCGGGAAACGTTTGGATTCGAT 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 301 ACGTGGAATCTTGGCGATGGACGAGTCAAACGCGACTTGCGGGAAACGTTTGGATTCGAT 360
Query 361 AGGGCTAGAGAACACTGAGGCAAACCGTCAAGCTTTCCGGACTTTGTTGGTCTCTGCACC 420
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 361 AGGGCTAGAGAACACTGAGGCAAATCGTCAAGCTTTCCGGACTTTGCTGGTCTCTGCACC 420
Query 421 TGGACTGGGGCAGTACATCTCCGGCGCAATCCTATTTGAGGAGACTTTGTATCAGTCTAC 480
||||| || |||||| ||||||||||||| ||||||||||||||| |||| ||||||||
Sbjct 421 GGGACTCGGACAGTACGTCTCCGGCGCAATTCTATTTGAGGAGACTCTGTACCAGTCTAC 480
Query 481 CACCGAAGGGAAGAAAATGGTCGACGTCCTCGTCGAGCAGAACATTGTCCCTGGTATCAA 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CACCGAAGGCAAGAAAATGGTCGACGTCCTCGTCGAGCAGAACATTGTCCCTGGTATCAA 540
Query 541 AGTTGACAAGGGTTTGGTGCCACTTGTTGGATCCAACAATGAGTCATGGTGCCAAGGACT 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 AGTCGACAAGGGTTTGGTGCCACTTGTTGGATCCAACAATGAGTCATGGTGCCAAGGACT 600
Query 601 TGACGGTCTAGCCTCTAGAACTGCTGCTTACTACCAACAGGGTGCGCGTTTTGCCAAATG 660
|| |||||| | ||| |||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 601 AGATGGTCTATCATCTCGAACTGCTGCTTACTATCAACAGGGTGCGCGTTTCGCCAAATG 660
Query 661 GCGTACTGTCGTGAGCATTCCTAACGGTCCTTCTGCTCTCGCCGTCAAAGAAGCTGCTTG 720
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 661 GCGTACTGTCGTGAGCATTCCTAACGGTCCGTCTGCCCTCGCCGTCAAAGAAGCTGCTTG 720
Query 721 GGGTCTTGCTCGATACGCTGCCATTTCACAGGACAGCGGGTTGGTTCCGATTGTGGAGCC 780
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 721 GGGTCTTGCTCGATACGCTGCCATTTCACAGGACAGCGGTTTGGTTCCGATTGTTGAGCC 780
Query 781 AGAGATCTTGTTGGATGGAGAACACGACATTGACAGAACATACGACGTAGCAGAGAAGGT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 AGAGATCTTGTTGGATGGAGAACACGACATTGACAGAACATACGACGTAGCAGAGAAGGT 840
Query 841 TTGGGCTGAGGTTTTCTTTTACCTTGCTCAGAACAATGTCATGTTTGAAGGTATTCTCCT 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 841 TTGGGCTGAGGTTTTCTTTTACCTTGCTCAGAACAATGTCATGTTTGAAGGTATCCTCCT 900
Query 901 AAAACCAAGTATGGTGACTCCCGGAGCTGAGTCTAAAGACAGAGTTACTCCTGAAAAAGT 960
|||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 901 AAAACCGAGCATGGTGACTCCCGGAGCTGAGTCTAAAGACAGAGCTACTCCTGAACAAGT 960
Query 961 TGCCGCCTACACCCTCAAGCTCCTCCGCAACAGAGTCCCTCCCGCA-T--------TC-T 1010
|||||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct 961 TGCCGCCTACACCCTCAAGCTCCTCCGCAACAGAGTCCCTCCCGCAGTCCCCGGAATCAT 1020
Query 1011 -T----GTCCGGAGGACAGTCAGAGGTGGAGGCAACACTCAACCTGAACGCAATGAACCA 1065
| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 1021 GTTTTTGTCCGGAGGACAGTCGGAGGTGGAGGCAACACTCAACTTGAACGCAATGAACCA 1080
Query 1066 GGCACCAAACCCATGGCACGTGTCCTTCTCCTACGCACGTGCGTTGCAGAACACTTGTCT 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 GGCACCAAACCCATGGCACGTGTCCTTCTCCTACGCACGTGCGTTGCAGAACACTTGTCT 1140
Query 1126 GAAAACATGGGGCGGCAGACCCGAGAACGTGAACGCAGCTCAGACCACTCTCTTGGCCCG 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GAAAACATGGGGCGGCAGACCCGAGAACGTGAACGCAGCTCAGACCACTCTCTTGGCCCG 1200
Query 1186 TGCCAAGGCCAATTCGTTGGCTCAGCTCGGAAAATACACTGGAGAGGGTGAGTCCGAAGA 1245
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1201 TGCCAAGGCCAATTCGTTGGCTCAGCTCGGAAAATACACCGGTGAGGGTGAGTCCGAAGA 1260
Query 1246 GGCTAAGGAGGGCATGTTCGTCAAAGGCTACACCTATTGAAGAGATGATGCTGTGAAAAA 1305
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1261 GGCTAAGGAGGGCATGTTCGTCAAAGGGTACACCTATTGAAGAGATGATGCTGTGAAAAA 1320
Query 1306 AGAGA-GAAAGCAGATGTTTTAATTACATTTGTTTTTGAGTTTGCTTGTTATTAC-CATG 1363
||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1321 AGAGATGAA-GCAGATGTTTTAATCACATTTGTTTTTGAGTTTGCTTGTTATTAATCATG 1379
Query 1364 TCAAATCATTATTTTCTCTGCTTACTTTTGCATTAGCTACTCCTTTCAATAAGTTCTATT 1423
|||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct 1380 TCAAATCATTATTTTCTCTGCTTACTTT-GCGTTAGCTACTCCTTTTAATAAGTTCTATT 1438
Query 1424 ATATTGAAGTTATCTATCTATCTATCTTGATCTATTTGAACTTGGAAA 1471
||||||||||||||||||| || |||||||||||| |||||| |||
Sbjct 1439 ATATTGAAGTTATCTATCT--CT--CTTGATCTATTTAAACTTG-AAA 1481
> AT2G21330.1 | Symbols: FBA1 | fructose-bisphosphate aldolase
1 | chr2:9128151-9130240 REVERSE LENGTH=1553
Length=1553
Score = 1051 bits (569), Expect = 0.0
Identities = 977/1169 (84%), Gaps = 48/1169 (4%)
Strand=Plus/Plus
Query 146 AAATCCGAATGGGTCAAGGGACAAAG-CGTTCTCTTCCGTCAGCCTTCTTCCGCCTCCGT 204
||||| || ||||| |||||||| || | ||||| ||||||| ||||| || | ||| |
Sbjct 131 AAATCTGATTGGGTTAAGGGACAGAGTC-TTCTCCTCCGTCAACCTTCCTCTGTCTCAG- 188
Query 205 CGTCCTCCGCA-AC-CGTGCCACC-T-C-C-CTCACCGTCCGTGCCGCTTCCT-CCTACG 257
| | | |||| | |||| |||| | | | ||||||||||| ||||||| || | ||||
Sbjct 189 C-T-ATTCGCAGCCACGTGGCACCTTCCGCTCTCACCGTCCGAGCCGCTT-CTGCTTACG 245
Query 258 CCGATGAGCTTGTTAAGACAGCGAAAACTATTGCGTCTCCGGGACGTGGAATCT-TGGCG 316
|||||||||| || || || || ||||| || ||||||||||||| ||||| | |||||
Sbjct 246 CCGATGAGCTCGTCAAAACCGCTAAAACAATCGCGTCTCCGGGACACGGAAT-TATGGCG 304
Query 317 ATGGACGAGTCGAACGCGACTTGCGGGAAA-CGTTTGGATTCGATAGGGCTAGAGAACAC 375
||||| ||||| ||||||||||| ||||| ||||||| || || ||||||||||||||
Sbjct 305 ATGGATGAGTCCAACGCGACTTG-TGGAAAGCGTTTGGCGTCAATTGGGCTAGAGAACAC 363
Query 376 TGAGGCAAACCGTCAAGCTTTCCGGACTTTG-TTGGTCTCTGCACCTGGACTGGGGCAGT 434
||||| ||||||||||||| | |||| ||| || || || || || ||||| || ||||
Sbjct 364 GGAGGCTAACCGTCAAGCTTACAGGACGTTGCTT-GTGTCGGCTCCAGGACTTGGACAGT 422
Query 435 ACATCTCCGGCGCAATCCTATTTGAGGAGACTTTGTATCAGTCTACCACCGAAGGGAAGA 494
|||||||||| || ||||| || ||||||||| |||| || || ||||| || || ||||
Sbjct 423 ACATCTCCGGAGCTATCCTGTTCGAGGAGACTCTGTACCAATCCACCACTGATGGCAAGA 482
Query 495 AAATGGTCGACGTCCTCGTCGAGCAGAACATTGTCCCTGGTATCAAAGTTGACAAGGGTT 554
||||||| || || ||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct 483 AAATGGTTGATGTTCTCGTCGAGCAGAACATCGTCCCTGGCATCAAAGTCGACAAGGGTT 542
Query 555 TGGTGCCACTTGTTGGATCCAACAATGAGTCATGGTGCCAAGGACTTGACGGTCTAGCCT 614
|||||||||||||||| || || | ||||||||||||||||||||||||||| ||||||
Sbjct 543 TGGTGCCACTTGTTGGGTCTTACGACGAGTCATGGTGCCAAGGACTTGACGGTTTAGCCT 602
Query 615 CTAGAACTGCTGCTTACTACCAACAGGGTGCGCGTTTTGCCAAATGGCGTACTGTCGTGA 674
|| | || ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||
Sbjct 603 CTCGCACCGCTGCTTACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGA 662
Query 675 GCATTCCTAACGGTCCTTCTGCTCTCGCCGTCAAAGAAGCTGCTTGGGGTCTTGCTCGAT 734
||||||| || || || |||||| | || || |||||||| |||||||| |||||||| |
Sbjct 663 GCATTCCAAATGGACCCTCTGCTTTGGCTGTTAAAGAAGCAGCTTGGGGACTTGCTCGCT 722
Query 735 ACGCTGCCATTTCACAGGACAGCGGGT-TGGTTCCGATTGTGGAGCCAGAGATCT-TGTT 792
|||| || ||||| || |||||| ||| |||| |||||||||||||||||||| | ||||
Sbjct 723 ACGCAGCTATTTCTCAAGACAGC-GGTCTGGTGCCGATTGTGGAGCCAGAGAT-TATGTT 780
Query 793 GGATGGAGAACACGACATTGACAGAACATACGACGTAGCAGAGAAGGTTTGGGCTGAGGT 852
||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 781 GGACGGAGAACACGGCATTGACAGGACATACGACGTTGCAGAGAAGGTTTGGGCTGAGGT 840
Query 853 TTTCTTTTACCTTGCTCAGAACAATGTCATGTTTGAAGGTATTCTCCTAAAACCAAGTAT 912
||||| ||||| ||||||||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 841 CTTCTTCTACCTCGCTCAGAACAACGTCATGTTCGAAGGTATTCTCCTGAAGCCAAGCAT 900
Query 913 GGTGACTCCCGGAGCTGAGTCTAAAGACAGAGTTACTCCTGAAAAAGTTGCCGCCTACAC 972
||| ||||| ||||||||| | | |||||||| ||||||||| | ||||| |||||||
Sbjct 901 GGTTACTCCAGGAGCTGAGGCCACAGACAGAGCTACTCCTGAGCAGGTTGCTTCCTACAC 960
Query 973 CCTCAAGCTCCTCCGCAACAG-A---GTCC--C--T-CCC-G---CA--TTCTTGTCCGG 1017
||||||||||| |||||||| | ||| | | ||| | || |||||||| ||
Sbjct 961 TCTCAAGCTCCTTCGCAACAGAATCCCTCCTGCTGTCCCCGGAATCATGTTCTTGTCTGG 1020
Query 1018 AGGACAGTCAGAGGTGGAGGCAACAC-TCAACCTGAACGCAATGAACCAGGCACCAAACC 1076
|||||||| ||| ||||||| || | | ||| |||||||||||||||||||||| ||||
Sbjct 1021 TGGACAGTCCGAGTTGGAGGCGAC-CTTGAACTTGAACGCAATGAACCAGGCACCGAACC 1079
Query 1077 CATGGCACGTGTCCTTCTCCTACGCACGTGCGTTGCAGAACACTTGTCT-GAAAACATGG 1135
||||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||||
Sbjct 1080 CATGGCACGTGTCCTTCTCCTACGCACGTGCCTTGCAGAACACTTG-CTTGAAGACATGG 1138
Query 1136 GGCGGCA-G-ACCCGAGAACGTGAACGCAGCTCAG-ACCACTCTCTTGGCCCGTGCCAAG 1192
|| |||| | | ||||||||||| || |||||| || | |||||||||| | |||||
Sbjct 1139 GGAGGCAAGGAA--GAGAACGTGAAGGCGGCTCAGGAC-ATTCTCTTGGCCAGAGCCAAA 1195
Query 1193 GCCAATTCGTTGGCTCAGCTCGGAAAATACACTGGAGAGGGTGAGTCCGAAGAGGCTAAG 1252
||||||||| ||||||||||||| |||||||||||||| || ||||| || || || |||
Sbjct 1196 GCCAATTCGCTGGCTCAGCTCGGGAAATACACTGGAGAAGGCGAGTCTGAGGAAGCCAAG 1255
Query 1253 GAGGGCATGTTCGTCAAAGGCTACACCTA 1281
||||| ||||| || ||||||||||||||
Sbjct 1256 GAGGGTATGTTTGTAAAAGGCTACACCTA 1284
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73995603330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5