BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490676
Length=2882
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr... 4621 0.0
AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr... 2806 0.0
> AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr4:18209399-18215056
FORWARD LENGTH=2884
Length=2884
Score = 4621 bits (2502), Expect = 0.0
Identities = 2773/2900 (96%), Gaps = 34/2900 (1%)
Strand=Plus/Plus
Query 1 CCGTCTTTGCTTCGTCGTGGTCTCTCTGACATTATCGTCAGACAAATAACTTCTAAAAAA 60
||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||| |
Sbjct 1 CCGTCTTGGCTTCGTGGTGGTCTCTCTGACATTATCGTCAGACAAATAATTTCT-AAATA 59
Query 61 TCAATCATCTCCTCTCGTTTGATT-C----AAAAAAGCTCAT---CG-ACGAACGATGGC 111
|| || ||||||||||||||||| | |||||||||||| || ||||||||||||
Sbjct 60 TCTCTCCTCTCCTCTCGTTTGATTCCAAAAAAAAAAGCTCATCGACGAACGAACGATGGC 119
Query 112 GGAAAGCGGCGGTGGCGGTGGCTGTTGTCCGCCGATGGATCTGATGCGTTCAGAGACGAT 171
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GGAAAGTGGCGGTGGCGGTGGCTGTTGTCCGCCGATGGATCTGATGCGTTCAGAGACGAT 179
Query 172 GCAACTTGTTCAGCTCATTGTTCCCATGGAATCTGCTCATCTCACCGTCTCTTACCTTGG 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GCAACTTGTTCAGCTCATTGTTCCCATGGAATCTGCTCATCTCACCGTCTCTTACCTTGG 239
Query 232 AGATCTTGGCCTCGTCCAATTCAAAGACCTTAATTCAGAGAAGAGCCCATTTCAACGTAC 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 AGATCTTGGCCTCGTCCAATTCAAAGACCTTAATTCAGAGAAGAGCCCATTTCAACGTAC 299
Query 292 TTACGCAGCTCAGATTAAAAGATGTGGAGAGATGGCACGAAAAATTCGTTTCTTCAGAGA 351
||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| ||
Sbjct 300 TTACGCAGCACAGATTAAAAGATGTGGAGAAATGGCACGGAAAATACGTTTCTTCAGGGA 359
Query 352 TCAAATGTCAAAAGCAGGAGTTCCAGCCAAGGAAATGCTAGTGAAAGAAAATGACATTGA 411
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 360 TCAAATGTCAAAAGCAGGAGTTCCAGCCAAGGAAATGCAAGGGAAAGAAAATGACATTGA 419
Query 412 CTTGGATGATGTTGAGGTCAAGCTTGGAGAGCTAGAAGCTGAACTTGTTGAAATCAATGC 471
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTTGGATGATGTTGAGGTAAAGCTTGGAGAGCTAGAAGCTGAACTTGTTGAAATCAATGC 479
Query 472 TAATAATGACAAGTTGCAGCGCTCCTATAATGAGCTTATGGAGTACAAGTTGGTTCTTCA 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TAATAATGACAAGTTGCAGCGCTCCTATAATGAGCTTATGGAGTACAAGTTGGTTCTTCA 539
Query 532 GAAGGCTGGTGAGTTCTTTTCTTCTGCTCATAGAAGTGCCACAGATCAACAGAGTGAGAT 591
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 540 GAAGGCTGGTGAGTTCTTTTCTTCTGCTCATAGAAGTGCCGCAGATCAACAGAGAGAGAC 599
Query 592 AGAATCACAACAAGCAGGTGAAGATCTGCTGGAGTCTCCTTTGTTACAGGAAGAGAAGTC 651
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 AGAATCACAACAAGCGGGTGAAGATCTGCTGGAGTCTCCTTTGTTACAGGAAGAGAAGTC 659
Query 652 CATTGATTCGACAAAGCAAGTAAAGCTTGGATTTCTTACCGGATTAGTGCCTCGTGAAAA 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 CATTGATTCGACAAAGCAAGTAAAGCTTGGATTTCTTACCGGATTAGTGCCTCGTGAAAA 719
Query 712 GTCTATGGTGTTTGAGAGGATTCTATTCCGTGCGACTAGGGGCAACATCTTTATCCGACA 771
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 720 GTCTATGGTCTTTGAGAGGATTCTGTTCCGTGCGACCAGGGGCAACATTTTTATCCGACA 779
Query 772 GACTGTCATTGAGGAGCCGGTCATTGATCCCAACACTGGGGAGAAGGCTGAGAAAAATGT 831
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 780 GACTGTCATTGAGGAGCCAGTCATTGATCCCAACTCTGGGGAGAAGGCTGAGAAAAATGT 839
Query 832 TTTTGTTGTCTTCTATTCCGGGGAAAGAGCGAAAAGCAAAATTCTTAAAATATGTGAAGC 891
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 840 TTTTGTTGTCTTCTATTCCGGGGAAAGAGCGAAAAGCAAAATTCTGAAAATATGTGAAGC 899
Query 892 TTTTGGGGCTAATCGTTATCCTTTCAGTGAGGACCTTGGAAGACAAGCTCAAATGATAAC 951
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 900 TTTTGGGGCCAATCGTTATCCTTTCAGTGAGGACCTTGGAAGACAAGCTCAGATGATAAC 959
Query 952 CGAGGTTTCGGGTCGATTATCAGAGCTTAAAACCACGATAGATGCTGGGTTAGGTCAACG 1011
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 960 CGAGGTTTCTGGTCGATTATCCGAGCTTAAAACCACGATAGATGCTGGGTTAGGTCAGCG 1019
Query 1012 TAACATTCTTTTGCAGACCATCGGAGATAAGTTTGAGCTATGGAACCTCAAGGTACGCAA 1071
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1020 TAACATTCTTTTGCAGACCATTGGAGATAAGTTTGAACTATGGAACCTCAAGGTACGCAA 1079
Query 1072 AGAGAAAGCTATCTATCATACATTGAACATGCTTAGTCTTGATGTGACGAAGAAGTGCCT 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AGAGAAAGCTATCTATCATACATTGAACATGCTTAGTCTTGATGTGACGAAGAAGTGCCT 1139
Query 1132 CGTGGCCGAGGGCTGGAGTCCTGTCTTTGCATCAAAAGAAATTCAAGATGCATTACAGCG 1191
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1140 CGTGGCCGAGGGCTGGAGTCCTGTCTTTGCATCAAGAGAAATTCAAGATGCATTACAGCG 1199
Query 1192 TGCTGCCGTTGATTCCAATTCTCAAGTTGGATCAATTTTCCAGGTCCTAAGGACCAAAGA 1251
||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1200 TGCCGCCGTTGACTCCAATTCTCAAGTTGGATCAATTTTCCAGGTCCTAAGAACCAAAGA 1259
Query 1252 GTCACCACCAACTTATTTTCGCACAAACAAATTTACTTCTGCAATCCAGGAAATTGTTGA 1311
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 GTCGCCACCAACTTATTTTCGCACAAACAAATTTACTTCTGCAATCCAGGAAATTGTTGA 1319
Query 1312 TGCGTATGGTGTGGCCAAGTATCAGGAAGCCAATCCAGGTGTATTCACAATTGTTACCTT 1371
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1320 TGCGTATGGTGTGGCCAAGTATCAGGAAGCCAATCCAGGTGTATTCACCATTGTTACCTT 1379
Query 1372 CCCCTTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTATTCTGCTTGC 1431
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1380 CCCCTTCCTTTTCGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGCATTCTGCTTGC 1439
Query 1432 AACGATGTACTTGATATTGAGAGAAAAGAAACTTTCCAGCCAGAAACTTGGGGATATTAT 1491
||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 1440 AACTATGTACTTGATATTGAAAGAAAAGAAACTTGCCAGCCAGAAACTTGGGGATATTAT 1499
Query 1492 GGAAATGGCTTTTGGTGGGCGTTATGTCATTTTGATGATGTCACTCTTCTCAATATACAC 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GGAAATGGCTTTTGGTGGGCGTTATGTCATTTTGATGATGTCACTCTTCTCAATATACAC 1559
Query 1552 TGG-TCTAATCTACAACGAGTTCTTCTCTATACCATACCCATTGTTTGCTCCTTCAGCCT 1610
||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1560 TGGAT-TAATCTACAACGAGTTCTTCTCTATACCATTCCCATTGTTTGCTCCTTCAGCGT 1618
Query 1611 ATGATTGCCGTGATACCTCTTGCAGCGAGGCTACAACAATTGGTTTGATAAAGGTCAGAG 1670
|||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1619 ATGATTGCCGGGATGTCTCTTGCAGCGAAGCTACAACAATTGGTTTGATAAAGGTCAGAG 1678
Query 1671 ACACTTATCCATTTGGTCTAGATCCTGTGTGGCATGGAAGTCGCAGCGAGCTGCCATTCC 1730
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1679 ACACTTATCCATTTGGTCTAGATCCTGTGTGGCATGGATCCCGCAGTGAGCTGCCATTCC 1738
Query 1731 TGAACTCGCTGAAGATGAAAATGTCAATCCTTCTCGGAGTTTCTCAAATGAACCTCGGAA 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 TGAACTCGCTGAAGATGAAAATGTCAATCCTTCTCGGAGTTTCTCAAATGAACCTCGGAA 1798
Query 1791 TCATAATGAGTTACTTTAATGCTAGATTCTTCAAATCAAGTGTAAATATATGGTTCCAGT 1850
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 TCATAATGAGCTACTTTAATGCTAGATTCTTCAAATCAAGTGTAAATATATGGTTCCAGT 1858
Query 1851 TCATTCCCCAAATGATATTCTTGAACAGCTTGTTTGGCTATCTCTCGGTCCTCATCATCA 1910
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1859 TCATTCCCCAAATGATATTCTTGAACAGCTTGTTTGGCTATCTCTCAGTCCTCATCATCA 1918
Query 1911 TAAAGTGGTGCACTGGTTCTCAAGCAGATTTGTATCATGTAATGATATATATGTTCCTGA 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 TAAAGTGGTGCACTGGTTCTCAAGCAGATTTGTATCATGTAATGATATATATGTTCCTGA 1978
Query 1971 GCCCAATGGACGAGTTAGGAGAGAATCAACTGTTCCCTCACCAGAAAACAGTGCAGCTTC 2030
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1979 GCCCAATGGACGAGTTAGGAGAGAATCAACTGTTCCCTCACCAGAAAACATTACAGCTTG 2038
Query 2031 TGCTTCTCTTTCTGGCTCTTGTTTCTGTTCCGTGTATGTTGCTTCCAAAGCCGTTCATCT 2090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2039 TGCTTCTCTTTCTGGCTCTTGTTTCTGTTCCGTGTATGTTGCTTCCAAAGCCGTTCATCT 2098
Query 2091 TGAAGAAACAACATGAAGCTAGGCATCAAGGTCAGTTATACACACCTCTTGACGAGACAG 2150
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct 2099 TGAAGAAACAACATGAAGCTAGGCATCAAGGCCAGGCGTACGCACCTCTTGACGAGACAG 2158
Query 2151 ACGAGAGTCTTCATGTAGAGACAAGCGGAGGA---TCCCATGGGCATGAGGAGTTTGAAT 2207
| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 2159 ATGAGAGTCTTCATGTAGAGACAAACGGAGGAGGATCCCATGGGCATGAGGAGTTTGAAT 2218
Query 2208 TCAGCGAGATATTTGTGCATCAGCTGATTCACACCATAGAGTTTGTGCTTGGAGCTGTTT 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 TCAGCGAGATATTTGTGCATCAGCTGATTCACACCATAGAGTTTGTGCTTGGAGCTGTTT 2278
Query 2268 CCAACACCGCTTCTTACCTGCGTTTATGGGCTCTCAGTCTTGCCCACTCAGAGCTATCAT 2327
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||
Sbjct 2279 CCAACACCGCTTCTTACCTGCGTCTATGGGCTCTCAGTCTTGCCCACTCGGAGCTGTCAT 2338
Query 2328 CAGTCTTCTATGAGAAGGTCCTCCTTCTCGCTTTTGGTTACAACAATGTGTTGATC-TGG 2386
||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||
Sbjct 2339 CAGTCTTCTATGAGAAGGTCCTCCTTCTCGCTTGGGGTTACAACAATCCGTTGATCCTG- 2397
Query 2387 ATCGTTGGGATCATCGTGTTCATATTCGCGACCGTGGGAGTGTTGCTGGTGATGGAGTCA 2446
||||||||| || | |||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 2398 ATCGTTGGGGTCTTGGTGTTCATATTCGCAACCGTGGGAGTTTTGCTGGTGATGGAGACA 2457
Query 2447 CTAAGCGCGTTCCTTCACGCGCTGCGTCTCCACTGGGTTGAGTTTCAGAATAAATTCTAC 2506
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2458 CTAAGCGCGTTCCTTCACGCGCTGCGTCTTCACTGGGTTGAGTTTCAGAACAAATTCTAC 2517
Query 2507 GAAGGAGATGGTTACAAGTTCGCTCCTTTCACTTTCGTTTTCACCGCAAACGAAGACGAG 2566
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 2518 GAAGGAGATGGTTACAAGTTCGCTCCTTTCACTTTCATTTTCACGGCAAACGAAGACGAG 2577
Query 2567 TGATGTGATTCATTCCTCTCATCCGCTGCATTTTGCATATATAAGGTACAAA---CATGT 2623
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 2578 TGATGTGATTCATTCCTCTCATCCTCTGCATTTTGCATATATAAGGTACAAAAAACATGT 2637
Query 2624 TTGATTTCTTTCTATTAAAATCCAATATATTTTTTCCCCTTCTCTCCGTATAAGGGTCAT 2683
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2638 TTGATTTCTTTCTATTAAAATCCAATATATTTTTTCCCCTTCTCTCCGTATAAGGGTCAA 2697
Query 2684 TTAAATTTATTTATTTGCCTGTGGAGATAAATTTTTACCa-aaaaaaTGAGGGGATACTT 2742
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2698 TTAAATTTATTTATTTGCCTGTGGAGATAAATTTTTACCATAAAAAATGAGGGGATACTT 2757
Query 2743 GGATTTGTACGAGGCAAAAATACAAAACGATACGATttgttgttgttgttgtttgtttgG 2802
|||| ||||||||||| || |||||||| || |||||||||||| | ||||||
Sbjct 2758 GGATCTGTACGAGGCA----TA-AAAACGAT----TT-GTTGTTGTTGTT-T--GTTTGG 2804
Query 2803 AATTAAATAATAAGCTGTGGATATGAATAAATTGAGGAATTGGACCTTCCCAACATGTAT 2862
|||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 2805 AATTAAATAATACGCTGTGGATATGAATAAAGTCAGGAATTGGACCTTCCCAACATGTAT 2864
Query 2863 ATGTTTTTCCAGCCCATGGG 2882
|||||||| ||| || ||||
Sbjct 2865 ATGTTTTTTCAGGCCGTGGG 2884
> AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr2:9162620-9168452
FORWARD LENGTH=2860
Length=2860
Score = 2806 bits (1519), Expect = 0.0
Identities = 2174/2491 (87%), Gaps = 42/2491 (2%)
Strand=Plus/Plus
Query 107 ATGGCGGAAAG---CGGCGGTGGCGGTGGCTGTTGTCCGCCGATGGATCTGATGCGTTCA 163
|||||||| || ||| ||||| ||||| || ||||||||||||||||||||||| |||
Sbjct 84 ATGGCGGAGAGTCACGGTGGTGGTGGTGGTTGCTGTCCGCCGATGGATCTGATGCGGTCA 143
Query 164 GAGA-CGATGCAACTTGTTC-AGCTCATTGTTCCCATGGAATCTGCTCATCTCACCGTCT 221
|| | |||||||||| |||| || |||||||||||||||||||||||||||| |||||||
Sbjct 144 GA-ACCGATGCAACTCGTTCAAG-TCATTGTTCCCATGGAATCTGCTCATCTTACCGTCT 201
Query 222 CTTACCTTGGAGATCTTGGCCTCGTCCAATTCAAAGACCTTAATTCAGAGAAGAGCCCAT 281
|||| || || ||||| || |||||||| |||||||| |||||||| |||||||||||||
Sbjct 202 CTTATCTCGGCGATCTCGGTCTCGTCCAGTTCAAAGATCTTAATTCTGAGAAGAGCCCAT 261
Query 282 TTCAACGTACTTACGCAGCTCAGATTAAAAGATGTGGAGAGATGGCACGAAAAATTCGTT 341
||||| | ||||| || |||||||| ||||||||||| || |||||||||||||| ||||
Sbjct 262 TTCAAAGGACTTATGCTGCTCAGATAAAAAGATGTGGGGAAATGGCACGAAAAATACGTT 321
Query 342 TCTTCAGAGATCAAATGTCAAAAGCAGGAGTTCCAGCCAAGGAAATGCTAG-TGAAAGAA 400
|||| | ||| ||||||||||| || |||||| | |||| || | |||| | | ||||
Sbjct 322 TCTTTAAAGAGCAAATGTCAAAGGCTGGAGTTACTCCCAAAGAGACCCTAGAT-AGAGAA 380
Query 401 AATGACATTGACTTGGATGATGTTGAGGTCAAGCTTGGAGAGCTAGAAGCTGAACTTGTT 460
||||| ||||| ||||||||||| ||||| ||||||| |||||| |||||||||||||||
Sbjct 381 AATGATATTGATTTGGATGATGTAGAGGTAAAGCTTGAAGAGCTTGAAGCTGAACTTGTT 440
Query 461 GAAATCAATGCTAATAATGACAAGTTGCAGCGCTCCTATAATGAGCTTATGGAGTACAAG 520
||||||||||||||||| |||||||||||||| || |||||||| ||| |||||||||||
Sbjct 441 GAAATCAATGCTAATAACGACAAGTTGCAGCGGTCTTATAATGAACTTGTGGAGTACAAG 500
Query 521 TTGGTTCTTCAGAAGGCTGGTGAGTTCTTTT-CTTCTGCTCATAGAAGTGCCACAGATCA 579
| |||||| |||||||||||||||| |||| |||| || ||||||||||| || | |||
Sbjct 501 CTCGTTCTTGAGAAGGCTGGTGAGTT-TTTTGCTTCAGCCCATAGAAGTGCTACCGCTCA 559
Query 580 ACAGAGTGAGATAGAATCACAACAAGCAGGTGAAGATCTGCTGGAGTCTCCTTTGTTACA 639
|||||||||||||||| || |||||| |||||||| || |||||| ||||| |||| ||
Sbjct 560 ACAGAGTGAGATAGAAACAGAACAAGTGGGTGAAGACCTCCTGGAGGCTCCTCTGTTGCA 619
Query 640 GGAAGAGAAGTCCATTGATTCGACAAAGCAAGTAAAGCTTGGATTTCTTACCGGATTAGT 699
|||||||||||| ||||| | ||||||||||||||||||||||| || || ||| ||||
Sbjct 620 GGAAGAGAAGTCTGTTGATCCCACAAAGCAAGTAAAGCTTGGATTCCTCACTGGACTAGT 679
Query 700 GCCTCGTGAAAAGTCTATGGTGTTTGAGAGGATTCTATTCCGTGCGACTAGGGGCAACAT 759
|||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 680 GCCTCGTGAAAAGTCTATGGTGTTCGAGAGGATCCTATTTCGTGCAACTAGGGGCAACAT 739
Query 760 CTTTATCCGACAGACTGTCATTGAGGAGCCGGTCATTGATCCCAACACTGGGGAGAAGGC 819
||| || |||||| |||||||||||||| | || ||||||||||| |||||||||||||
Sbjct 740 CTTCATACGACAGTCTGTCATTGAGGAGTCTGTTGTTGATCCCAACTCTGGGGAGAAGGC 799
Query 820 TGAGAAAAATGTTTTTGTTGTCTTCTATTCCGGGGAAAGAGCGAAAAGCAAAATTCTTAA 879
|||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 800 TGAGAAAAATGTATTTGTCGTCTTCTATTCTGGGGAAAGAGCAAAAAGCAAAATTCTTAA 859
Query 880 AATATGTGAAGCTTTTGGGGCTAATCGTTATCCTTTCAGTGAGGACCTTGG-AAGACAAG 938
|||||||||||||||||||| ||||| |||||||||||||| || || || || |||||
Sbjct 860 GATATGTGAAGCTTTTGGGGCCAATCGCTATCCTTTCAGTGAAGATCTGGGCAA-ACAAG 918
Query 939 CTCAAATGATAACCGAGGTTTCGGGTCGATTATCAGAGCTTAAAACCACGATAGATGCTG 998
|||||||||| || |||||||| ||||| ||||||||||||||||| || |||| |||||
Sbjct 919 CTCAAATGATGACTGAGGTTTCAGGTCGGTTATCAGAGCTTAAAACTACCATAGGTGCTG 978
Query 999 GGTTAGG-TCAACGTAACATTCTTTT-GCAGACCATCGGAGATAAGTTTGAGCTATGGAA 1056
|||| || ||| || ||||||||||| | ||||||| |||||||||||||||| ||||||
Sbjct 979 GGTT-GGATCAGCGCAACATTCTTTTAG-AGACCATTGGAGATAAGTTTGAGCAATGGAA 1036
Query 1057 CCTCAAGGTACGCAAAGAGAAAGCTATCTATCATACATTGAACATGCTTAGTCTTGATGT 1116
||||||| | |||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct 1037 CCTCAAGATTCGCAAAGAAAAAGCTATCTATCACACCTTGAACATGCTTAGTCTTGATGT 1096
Query 1117 GACGAAGAAGTGCCTCGTGGCCGAGGGCTGGAGTCCTGTCTTTGCATCAAAAGAAATTCA 1176
||| ||||||||||| |||| || ||||||||||||||||||||| ||| |||||||||
Sbjct 1097 GACTAAGAAGTGCCTTGTGGGTGAAGGCTGGAGTCCTGTCTTTGCAGCAACAGAAATTCA 1156
Query 1177 AGATGCATTACAGCGTGCTGCCGTTGATTCCAATTCTCAAGTTGGATCAATTTTCCAGGT 1236
||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| ||
Sbjct 1157 AGATGCATTGCATCGTGCTGCGGTTGACTCCAATTCTCAAGTTGGATCAATTTTCCAAGT 1216
Query 1237 CCTAAGGACCAAAGAG-TCACCACCAACTTATTTT-CGCACAAACAAATTTACTTCTGCA 1294
||| |||||||||||| | || || |||| |||| |||||||||||||||||| ||||
Sbjct 1217 CCTGAGGACCAAAGAGAT-GCCTCCGACTT-TTTTCCGCACAAACAAATTTACTACTGCT 1274
Query 1295 ATCCAGGAAATTGTTGATGCGTATGGTGTGGCCAAGTATCAGGAAGCCAATCC-AGGTGT 1353
||||||||||||||||||| || ||||||||||| |||||||| |||||||| | ||||
Sbjct 1275 TTCCAGGAAATTGTTGATGCATACGGTGTGGCCAAATATCAGGAGGCCAATCCTA-GTGT 1333
Query 1354 ATTCACAATTGTTACCTTCCCCTTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGG 1413
||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1334 ATTCACAATTGTTACCTTCCCCTTCCTGTTTGCTGTTATGTTTGGTGACTGGGGTCATGG 1393
Query 1414 AATATGTATTCTGCTTGCAACGATGTACTTGATATTGAGAGAAAAGAAACTTTCCAGCCA 1473
||| || | ||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 1394 AATCTGCCTGCTGCTTGCAACTATGTATTTAATATTGAGAGAAAAGAAACTTTCCAGCCA 1453
Query 1474 GAAACTTGGGGATATTATGGAAATGGCTTTTGGTGGGCGTTATGTCATTTTGATGATGTC 1533
|||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct 1454 GAAACTTGGGGATATTATGGAAATGGCTTTTGGTGGCCGTTACGTTATTTTTATGATGTC 1513
Query 1534 ACTCTTCTCAATATACACTGGTCTAATCTACAACGAGTTCTTCTCTATACCATACCCATT 1593
||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1514 ACTATTCTCAATATACACTGGTTTAATCTACAACGAGTTCTTCTCTATACCATATCCATT 1573
Query 1594 GTTTGCTC-CTTCAGCCTATGATTGCCGTGATACCTCTTGCAGCGAGGCTACAACAATTG 1652
||||||| || |||| || |||||||||||| ||||||||| |||||||| |||||||
Sbjct 1574 GTTTGCTAGCT-CAGCATACGATTGCCGTGATGTCTCTTGCAGTGAGGCTACTACAATTG 1632
Query 1653 GTTTGAT-AAAGGTCAGAGACACTTATCCATTTGGTCTAGATCCTGTGTGGCATGGAAGT 1711
|| |||| ||| | |||||||||||||||||||| | ||||||||||||||||| |
Sbjct 1633 GTCTGATCAAAACCC-GAGACACTTATCCATTTGGTGTGGATCCTGTGTGGCATGGTACC 1691
Query 1712 CGCAGCGAGCTGCCATTCCTGAACTCGCTGAAGATGAAAATGTCAATCCTTCTCGGAGTT 1771
||||| ||||| |||||||| || ||||| ||||||||||||||||| ||| | ||||||
Sbjct 1692 CGCAGTGAGCTACCATTCCTAAATTCGCTTAAGATGAAAATGTCAATTCTTATTGGAGTT 1751
Query 1772 TCTCAAATGAACCTCGGAATCATAATGAG-TTACTTTAATGCTAGATTCTTCAAATCAAG 1830
| |||||||||||||||||||||||||| || ||||||||| | |||||||||| |
Sbjct 1752 GCACAAATGAACCTCGGAATCATAATGAGCTT-CTTTAATGCAAAATTCTTCAAAAGT-G 1809
Query 1831 -TGTAAATATATGGTTCCAGTTCATTCCCCAAATGATATTCTTGAACAGCTTGTTTGGCT 1889
|||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||
Sbjct 1810 CTGTAAACATATGGTTCCAGTTCGTTCCCCAGATGATATTCTTGAACTGCTTGTTTGGCT 1869
Query 1890 ATCTCTCGGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTGTATCATG 1949
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1870 ATCTTTCGGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTATATCACG 1929
Query 1950 TAATGATATATATGTTCCTGAGCCCAATGGACGAGTTAGGAGAGAATCAACTGTTCCCTC 2009
||||||| || ||||| |||||||| ||||| || |||||||||||||| |||||||||
Sbjct 1930 TAATGATCTACATGTTTCTGAGCCCTATGGATGATTTAGGAGAGAATCAGCTGTTCCCTA 1989
Query 2010 ACCAGAAAACAGTGCAGCTTCTGC-TTC-TCTTTCTGGCTCTTGTTTCTGTTCCGTGTAT 2067
||||||||| ||| ||||| | | ||| ||||||||||||| |||||||| ||||| ||
Sbjct 1990 ACCAGAAAATAGTACAGCT-CA-CATTCCTCTTTCTGGCTCTGGTTTCTGTGCCGTGGAT 2047
Query 2068 GTTGCTT-CCAAAGCCGTTCATCTTGAAGAAACAACATGAAGCTAGGCATCAAGGTCAGT 2126
|||| || |||||||| |||||| |||| ||||||||||||||||| |||||||| | ||
Sbjct 2048 GTTG-TTGCCAAAGCCATTCATCCTGAAAAAACAACATGAAGCTAGACATCAAGGACTGT 2106
Query 2127 TATACACACCTCTTGACGAGACAGACGAGAGTCTTCATGTAGAGACAAGCGGAGGATCCC 2186
||| ||| |||||||||||||| ||||||||||| ||||| |||| || ||| |
Sbjct 2107 CATATGCACAGCTTGACGAGACAGATGAGAGTCTTCAAGTAGAAACAAATGGGGGAGGAC 2166
Query 2187 ATGGGCATGAGGAGTTTGAATTCAGCGAGATATTTGTGCATCAGCTGATTCACACCATAG 2246
|||| || || ||||||||||||||||| || |||||||| || || ||||||||||| |
Sbjct 2167 ATGGACACGAAGAGTTTGAATTCAGCGAAATCTTTGTGCACCAACTCATTCACACCATTG 2226
Query 2247 AGTTTGTGCTTGGAGCTGTTTCCAACACCGCTTCTTACCTGCGTTTATGGGCTCTCAGTC 2306
|||||||||||||||||||||||||||| |||||||| || ||| | |||||||||||||
Sbjct 2227 AGTTTGTGCTTGGAGCTGTTTCCAACACTGCTTCTTATCTTCGTCTCTGGGCTCTCAGTC 2286
Query 2307 TTGCCCACTCAGAGCTATCATCAGTCTTCTATGAGAAGGTCCTCCTTCTCGCTTTTGGTT 2366
| |||||||| ||| | || ||||||||||||||||||||||| ||| | |||| ||||
Sbjct 2287 TCGCCCACTCGGAGTTGTCGTCAGTCTTCTATGAGAAGGTCCTTCTTATGGCTTGGGGTT 2346
Query 2367 ACAACAATGTGTTGATCTGGATCGTTGGGAT-CATCGTGTTCATATTCGCGACCGTGGGA 2425
||||||||| || |||||||||||||| || | |||| |||||||| ||||| ||||||
Sbjct 2347 TCAACAATGTCTTCATCTGGATCGTTGGAATTC-TCGTCTTCATATTTGCGACTGTGGGA 2405
Query 2426 GTG-TTGCTGGTGATGGAGTCACTAAGCGCGTTCCTTCACGCGCTGCGTCTCCACTGGGT 2484
||| || || ||||||||| || | || || |||||||||||| ||||||| ||||||||
Sbjct 2406 GTGCTT-CTTGTGATGGAGACATTGAGTGCATTCCTTCACGCGTTGCGTCTTCACTGGGT 2464
Query 2485 TGAGTTTCAGAATAAATTCTACGAAGGAGATGGTTACAAGTTCGCTCCTTTCACTTTCGT 2544
|||| ||||| || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2465 GGAGTACCAGAACAAGTTCTACGAAGGCGATGGTTACAAGTTTGCTCCTTTCACTTTCAC 2524
Query 2545 TTTCACCGCAAACGAAGACGAGTGATGTGAT 2575
| || || ||||||||||||||||| ||||
Sbjct 2525 TCTCGTCGGAAACGAAGACGAGTGAT-TGAT 2554
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143226622265
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5