BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490783 Length=1668 Score E Sequences producing significant alignments: (Bits) Value AT4G39960.1 | Symbols: | Molecular chaperone Hsp40/DnaJ family... 2771 0.0 AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2... 1066 0.0 AT4G39970.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 63.9 5e-09 > AT4G39960.1 | Symbols: | Molecular chaperone Hsp40/DnaJ family protein | chr4:18533755-18536618 FORWARD LENGTH=1716 Length=1716 Score = 2771 bits (1500), Expect = 0.0 Identities = 1615/1671 (97%), Gaps = 5/1671 (0%) Strand=Plus/Plus Query 1 TCATTTGAGTCTACTCGTTTTTTCTTATCTATCGCAAAACTCTCCCGTCGTCACCATTCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCATTTGAGTCTACTCGTTTTTTCTTATCTATCGCAAAACTCTCCCGTCGTCACCATTCG 60 Query 61 ATTACGGGAGTGTAATGGCTCTTATACAATTCGGAAGTTCATGTGTTGCTCAATGGGGGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 61 ATTACGGGAGTGTAATGGCTCTTATACAATTTGGAAGTTCATGTGTTGCTCAATGGGGGA 120 Query 121 TTCTTCGTCCTCACTTTGCTGTTAAAGCTTTTTATCCAAGCAGATTGGAGTCTCACCAAG 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTCTTCGTCCTCGGTTTGCTGTTAAAGCTTTTTATCCAAGCAGATTGGAGTCTCACCAAG 180 Query 181 ACAATTGCATCAGCCAGATAAATTGTTTGGGAGCTTCAAGGTCGAGTATGTTTGCACAGG 240 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 181 ACAATTGCATCAGCCAAATAAATTGTCTGGGAGCTTCAAGGTCGAGTATGTTTGCACAGG 240 Query 241 GCTCTTTACCCTTCTTGTCATTGACGGGAGTATCTCGTAATACACATTCTCGTAGAGGAG 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 241 GCTCTTTACCCTTCTTGTCATTGACGGGAGTATCTCCTAATACACATTCTCGTAGAGGAG 300 Query 301 CTCGCTTCACTGTTAGAGCCGATGCTGATTTCTATTCTGTCCTTGGAGTCTCTAAAAATG 360 ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| Sbjct 301 CTCGCTTCACTGTTAGAGCTGATACTGATTTCTATTCTGTCCTTGGAGTCTCGAAAAATG 360 Query 361 CAACCAAAGCTGAGATTAAAAGTGCTTATCGGAAGCTCGCTAGGAGTTACCATCCGGACG 420 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || | Sbjct 361 CAACCAAAGCTGAGATTAAAAGCGCTTATCGGAAGCTCGCTAGGAGTTATCATCCAGATG 420 Query 421 TGAACAAGGATGCTGGGGCAGAAGATAAATTTAAAGAAATAAGTAATGCATATGAGATCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGAACAAGGATGCTGGGGCAGAAGATAAATTTAAAGAAATAAGTAATGCATATGAGATCT 480 Query 481 TATCAGATGATGAGAAAAGATCTCTGTACGACAGATATGGCGAGGCAGGAGTTAAAGGCG 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 481 TATCAGATGATGAGAAAAGATCTCTATACGACAGATATGGCGAGGCAGGAGTTAAAGGCG 540 Query 541 CTGGAATGGGAGGCATGGGGGATTATAGTAATCCATTTGATCTATTTGAGTCATTATTCG 600 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 541 CTGGAATGGGAGGCATGGGGGATTATAGTAATCCGTTTGATCTATTTGAGTCATTATTCG 600 Query 601 AAGGAATGGGTGGGATGGGAGGAATGGGAGGTGGAATGGGTAGTAGAGGTTCAAGGAGCA 660 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 601 AAGGAATGGGTGGGATGGGAGGAATGGGCGGTGGAATGGGTAGTAGAGGTTCAAGGAGCA 660 Query 661 GAGCTATCGATGGTGAAGATGAGTATTACTCACTAATCTTGAATTTCAAAGAAGCGGTTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GAGCTATCGATGGTGAAGATGAGTATTACTCACTAATCTTGAATTTCAAAGAAGCGGTTT 720 Query 721 TCGGTATTGAGAAAGAAATTGAGATATCTCGGTTAGAGAGCTGTGGGACTTGCAATGGTT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TCGGTATTGAGAAAGAAATTGAGATATCTCGGTTAGAGAGCTGTGGGACTTGCAATGGTT 780 Query 781 CTGGAGC-AAAGGCGGGAACCAAACCAACCAAATGCAAAACGTGTGGCGGGCAAGGACAG 839 ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 781 CTGGAGCTAAAG-CGGGAACCAAACCAACCAAATGCAAAACATGTGGCGGGCAAGGACAG 839 Query 840 GTGGTGGCATCGACGAGGACACCACTCGGTGTATTCCAACAAGTCATGACTTGCTCTCCA 899 ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 840 GTGGTAGCATCAACGAGGACACCACTCGGTGTATTCCAACAAGTGATGACTTGCTCTCCG 899 Query 900 TGCAACGGAACTGGAGAGATATCAAAACCATGTGGTGCATGTTCAGGAGATGGACGTGTG 959 || ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 900 TGTAACGGAACTGGGGAGATATCAAAACCGTGTGGTGCATGCTCAGGAGATGGACGTGTG 959 Query 960 AGAAGGACAAAGCGGATTAGTCTTAAAGTTCCTGCGGGTGTGGATTCTGGAAGTAGGTTA 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 AGAAGGACAAAGCGGATTAGTCTTAAAGTTCCTGCGGGTGTGGATTCTGGAAGTAGGTTA 1019 Query 1020 AGAGTAAGGGGAGAAGGAAATGCAGGAAAGAGAGGTGGATCACCGGGAGATCTCTTTGCG 1079 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 AGAGTGAGGGGAGAAGGGAATGCAGGAAAGAGAGGTGGATCACCGGGAGATCTCTTTGCG 1079 Query 1080 GTTATTGAGGTTATTCCGGATCCGATTTTGAAGCGTGATGATACAAATATACTTTATACG 1139 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1080 GTTATTGAGGTTATTCCAGATCCGGTTTTGAAGCGTGATGATACAAATATACTTTATACG 1139 Query 1140 TGTAAGATATCGTATGTAGATGCCATATTAGGGACGACTCTGAAGGTTCCAACAGTGGAT 1199 ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct 1140 TGTAAGATATCGTATGTAGATGCCATATTGGGGACGACTTTGAAGGTACCAACAGTGGAT 1199 Query 1200 GGAGAGGTGGATTTGAAAGTACCAGCAGGGACACAACCGAGCACGACATTGGTAATGGCG 1259 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct 1200 GGAGAGGTGGATTTGAAAGTACCGGCAGGGACACAACCAAGCACGACATTGGTGATGGCT 1259 Query 1260 AGAAAAGGAGTTCCGGTTTTGAATAAGAGTAAGATGAGAGGTGACCAATTAGTGAGAGTG 1319 | ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct 1260 AAAAAAGGAGTTCCGGTTTTGAATAAGAGCAAGATGAGAGGTGATCAGTTAGTGAGAGTG 1319 Query 1320 CAAGTTGAGATTCCTAAGAGATTGAGTAAAGAAGAGAAGAAGCTTGTTGAGGAGCTTGCT 1379 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 1320 CAAGTTGAGATTCCTAAGAGATTGAGTAAAGAAGAGAAGATGCTTGTTGAGGAGCTGGCT 1379 Query 1380 GATATGAGCAAGAACAAGGTAGCTAATAGCAGGAGATAAACCAACACACAATATTAGTGA 1439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 GATATGAGCAAGAACAAGGTAGCTAATAGCAGGAGATAAACCAACACACAATATTAGTGA 1439 Query 1440 AATTTGGTGTTATATAGATTCATCATTCTCTGCTTGTCTTCTTTCTAATGGGTCTTCTAA 1499 ||| || ||||||||||||||||||||||||||||||| |||||||||||| || ||||| Sbjct 1440 AATGTGATGTTATATAGATTCATCATTCTCTGCTTGTCGTCTTTCTAATGGTTCGTCTAA 1499 Query 1500 TGATGGAGAAGATAAGCAAGAGG-AAGAAGAAAGACTTATTAGGTGAGAGGAAAATTTGA 1558 |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1500 CGATGGAGAAGATAAGCAAGAGGCAA-AAGAAAGACTTATTAGGTGAGAGGAAAATTTGA 1558 Query 1559 AGAACTCTatttttgggttttcctcttcaatttttgtgttttacttttaaaacaattttt 1618 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1559 AGAACTCTGGTTTTGGGTTTTCCTCTTCAATTTTTGTGTTTTACTTTTAAAACAAATTTT 1618 Query 1619 atggatttaTC-GGATTCAGGGTAGGTCTTGATTGTATTGTACTGCTATTT 1668 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1619 ATGGATTTATCAGGATTCAGGGTAGGTCTTGATTGTATTGTACTGCTATTT 1669 > AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2:9497595-9500615 FORWARD LENGTH=1615 Length=1615 Score = 1066 bits (577), Expect = 0.0 Identities = 1159/1429 (81%), Gaps = 83/1429 (6%) Strand=Plus/Plus Query 20 TTTTCTTATCTATCGCAAAACTCTCCCGTCGT-CACCATTCGATTACGGGAGTGTAATG- 77 ||||||||||| || | | |||| ||||||| ||||||| ||||||||||||||| || Sbjct 65 TTTTCTTATCTCTCTCGGAGCTCTTCCGTCGTCCACCATT-GATTACGGGAGTGTATTGA 123 Query 78 GC------T--CT-T-ATACAA-TTCGGAAGTTCATGTGTTGCTCAATGGGGGATTCTTC 126 || | || | |||||| || |||||| ||||||||||||||| ||| | ||| Sbjct 124 GCTAAATATGGCTATAATACAACTT-GGAAGTACATGTGTTGCTCAAT---GGAGTATTC 179 Query 127 GTCCTCACTTTGCTGTTAAAGCTTTTTATCCAAGCAGATTGGAGT---CTCACCAAGACA 183 ||||||| ||||| || | ||||| |||||| |||||| | || | ||| ||| | | Sbjct 180 GTCCTCAATTTGCAGTCAGAGCTTATTATCCCAGCAGAATCGAATCAACTCGCCATCAAA 239 Query 184 ATTGCA-TCAGCC-AGATAAATTGTTTGGGAGCTTCAAGGTCGAGTATGTT-TGCACA-G 239 ||| || | |||| || ||||||||||||||||||||| |||||||||||| | |||| | Sbjct 240 ATTCCAGT-AGCCAAG-TAAATTGTTTGGGAGCTTCAAAGTCGAGTATGTTCT-CACATG 296 Query 240 GGCTCTTTACCCTTCTTGT-CATTGACGGGAGTATCTC-GTAATA--CA-CATTCTCGTA 294 || || || |||||||||| || |||||||| | || | | |||| || | | |||| | Sbjct 297 GG-TCATTGCCCTTCTTGTCCA-TGACGGGAATGTC-CAGAAATATGCATCCTCCTCGCA 353 Query 295 GAGGAGCTCGCTTCACTGTTAGAGCCGATGCTGATTTCTATTCTGTCCTTGGAGTCTCTA 354 ||||| ||||||||||||||||||| ||||| |||| |||||| || || ||||| || | Sbjct 354 GAGGATCTCGCTTCACTGTTAGAGCTGATGCAGATTACTATTCGGTACTCGGAGTTTCGA 413 Query 355 AAAATGCAACCAAAGCTGAGATTAAAAGTGCTTATCGGAAGCTCGCTAGGAGTTACCATC 414 |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| Sbjct 414 AAAATGCAACCAAAGCTGAGATTAAAAGCGCTTATCGGAAGCTGGCTAGGAATTACCATC 473 Query 415 CGGACGTGAACAAGGATGCTGGGGCAGAAGATAAATTTAAAGAAATAAGTAATGCATATG 474 |||| |||||||||||| |||| |||||||| ||||| |||||||||||||| ||||||| Sbjct 474 CGGATGTGAACAAGGATCCTGGCGCAGAAGAGAAATTCAAAGAAATAAGTAACGCATATG 533 Query 475 AGATCTTATCAGATGATGAGAA-AAGATCTCTGTACGACAGATATGGCGAGGCAGGAGTT 533 || | |||||||||||||| || || |||||| ||||| || ||||| ||||| ||| || Sbjct 534 AGGTTTTATCAGATGATGAAAAGAA-ATCTCTTTACGATAGGTATGGTGAGGCCGGACTT 592 Query 534 AAAGGCGCTG--GAATGGGAGGCA-TGGGGGATTATAGTAATCCATTTGATCTATTTGAG 590 |||||||||| | || | | || ||||| ||| ||||||||| || |||||||| || Sbjct 593 AAAGGCGCTGCTGGATTTG-G-CAATGGGG-ATTTTAGTAATCCGTTCGATCTATTCGAC 649 Query 591 TCATTATTCGAAGGAATGGGTGGGATGGGAGGAATGGGAGGTGGAATGGGTAGTAGAGGT 650 |||||||||||||| | | || ||| ||||| ||| | ||| || | | Sbjct 650 TCATTATTCGAAGGC-T---TCGG-TGG------TGGGA--TGG---G--TAG-AG-G-T 688 Query 651 TCAAGGAGCAGAGCTATCGATGGTGAAGATGAGTATTACTCACTAATCTTGAATTTCAAA 710 ||||| ||||||||| | |||||| |||| ||||||||| | |||||||| || |||||| Sbjct 689 TCAAGAAGCAGAGCTGTGGATGGTCAAGACGAGTATTACACGCTAATCTTAAACTTCAAA 748 Query 711 GAAGCGGTTTTCGGTATTGAGAAAGAAATTGAGATATCTCGGTTAGAGAGCTGTGGGAC- 769 |||||||||||||| || ||||||||||| |||||||| ||| | |||||||||||||| Sbjct 749 GAAGCGGTTTTCGGAATGGAGAAAGAAATAGAGATATCCCGGCTCGAGAGCTGTGGGACA 808 Query 770 T-TGCAATGGTTCTGGAGCAAAGGCGGGAACCAAACCAACCAAATGCAAAACGTGTGGCG 828 | || || ||||| || ||||| | ||||||||||| |||||||||| |||||||||| Sbjct 809 TGTG-AA-GGTTCAGGTGCAAAACCTGGAACCAAACCGACCAAATGCACCACGTGTGGCG 866 Query 829 GGCAAGGACAGGTGGTGGCATC-GACGAGGACACCACTCGGTGTATTCCAACAAGTCATG 887 | ||||| || ||||| || | | | || || || || || || ||||||||||||||| Sbjct 867 GACAAGGCCAAGTGGTTTCAGCAG-CTAGAACTCCTCTGGGCGTGTTCCAACAAGTCATG 925 Query 888 ACTTGCTC-TCCATGCAACGGAACTGGAGAGATATCAAAACCATGTGGTGCATGTTCAGG 946 |||||||| ||| || || || ||||||||||| || | || |||||| | || || || Sbjct 926 ACTTGCTCGTCC-TGTAATGGCACTGGAGAGATCTCGACGCCGTGTGGTACTTGCTCTGG 984 Query 947 AGATGGACGTGTGAG-AAGGACAAAGCGGATTAGTCTTAAAGTTCCTGC-GGGTGTGGAT 1004 ||| ||||| ||||| ||| ||||| ||||| ||||| ||||| || || ||| || ||| Sbjct 985 AGACGGACGCGTGAGGAAG-ACAAAACGGATAAGTCTCAAAGTACCAGCCGGG-GTTGAT 1042 Query 1005 TCTGGAAGTAGGTTAAGAGTAAGGGGAGAAGGAAATGCAGGAAAGAGAGGTGGATCACCG 1064 || || || |||| ||||| || |||||||| ||||| || |||||||| |||||||| Sbjct 1043 TCAGGTAGCCGGTTGAGAGTGAGAGGAGAAGGCAATGCCGGGAAGAGAGGCGGATCACCA 1102 Query 1065 GGAGATCTCTTTGCGGTTATTGAGGTTATTCCGGATCCGATTTTGAAGCGTGATGATACA 1124 || ||||| |||| ||||| || ||||| || || ||||||||||| || || |||||| Sbjct 1103 GGCGATCTGTTTGTTGTTATAGAAGTTATCCCAGACCCGATTTTGAAACGAGACGATACA 1162 Query 1125 AATATACTTTATACGTGTAAGATATCGTATGTAGATGCCATATTAGGGACGACTCTGAAG 1184 ||||| || || || || |||||||||||| | ||||| || ||||||||||| ||||| Sbjct 1163 AATATTCTCTACACTTGCAAGATATCGTATATCGATGCGATTTTAGGGACGACACTGAAA 1222 Query 1185 GTTCCAACAGTGGATGG-AGAGGTGGATTTGAAAGTACCAGCAGGGACACAACCGAGCAC 1243 || |||||||||||||| | || | ||||||||||| ||||| ||||||||||| ||||| Sbjct 1223 GTACCAACAGTGGATGGGACAG-TAGATTTGAAAGTTCCAGCTGGGACACAACCTAGCAC 1281 Query 1244 GACA-TTGGTAATGGCGAGAAAAGGAGTTCCGGTTTTGAATAAGAGTAAGATGAGAGGTG 1302 ||| ||| | ||||||| ||||||||||||||| ||||| |||||||| |||||||| | Sbjct 1282 GACGCTTG-TGATGGCGAAAAAAGGAGTTCCGGTATTGAACAAGAGTAATATGAGAGGAG 1340 Query 1303 ACCAATTAGTGAGAGTGCAAGTTGAGATTCCTAAGAGATTGAGTAAAGAAGAGAAGAAGC 1362 | || || |||||||| ||||| ||||| |||||||||||||| ||||| ||||| || | Sbjct 1341 ATCAGTTGGTGAGAGTACAAGTGGAGATACCTAAGAGATTGAGCAAAGAGGAGAAAAAAC 1400 Query 1363 TTGTTGAGGAGCTTGCTGATATGAGCAAGAACAAGG-TAGCTAATAGCA 1410 || |||| ||||||||||||||||||||||||||| | |||||||||| Sbjct 1401 TTATTGAAGAGCTTGCTGATATGAGCAAGAACAAGACT-GCTAATAGCA 1448 > AT4G39970.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18536538-18538506 REVERSE LENGTH=1168 Length=1168 Score = 63.9 bits (34), Expect = 5e-09 Identities = 34/34 (100%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 1635 CAGGGTAGGTCTTGATTGTATTGTACTGCTATTT 1668 |||||||||||||||||||||||||||||||||| Sbjct 1168 CAGGGTAGGTCTTGATTGTATTGTACTGCTATTT 1135 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82429294890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5