BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491120
Length=2998
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | gluta... 4444 0.0
AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutama... 2054 0.0
> AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate
receptor 2 | chr4:16789721-16793685 FORWARD LENGTH=3205
Length=3205
Score = 4444 bits (2406), Expect = 0.0
Identities = 2750/2914 (94%), Gaps = 31/2914 (1%)
Strand=Plus/Plus
Query 89 GGAACTGGTTAAACCAAAACAATGTTTTGGGTTTTGGTTCTGTTGAGCTTCATTGTTCTT 148
||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 222 GGAACTGATTAAGCCAAAGCTATGTTTTGGGTTTTGGTTCTGTTGAGCTTCATTGTTCTT 281
Query 149 CTTGGTGATGGGATTATTTCAGAGGGAGC---TTCAAGGCCTCGTTATGTTGATGTTGGA 205
||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct 282 ATTGGTGATGGGATGATTTCAGAGGGAGCTGGTTTAAGGCCTCGTTATGTTGATGTTGGA 341
Query 206 GCAATATTCAGTTTAGGGACTTTACATGGTGAAGTTACAAATATTGCCATGAAAGTTGCA 265
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||
Sbjct 342 GCAATATTCAGTTTAGGGACTTTACAGGGTGAAGTTACAAATATTGCTATGAAAGCTGCA 401
Query 266 GAGGGTGATGTAAATTCTGATCCTCTCTTCCTTGGTGGATCAAAATTGCGTATAACGACG 325
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 402 GAGGAAGATGTAAATTCTGATCCTAGCTTCCTTGGTGGATCAAAATTGCGTATAACGACG 461
Query 326 TATGATGCCAAGCGTAATGGATTCCTCACCATCATGGGAGCATTGCAATTCATGGAGACT 385
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 462 TATGATGCAAAGCGTAATGGATTCCTCACCATCATGGGAGCTTTGCAATTCATGGAGACT 521
Query 386 GATGCTGTGGCTATCATTGGTCCTCAGACATCAATAATGGCTCATGTTCTGTCTCATCTT 445
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 522 GATGCTGTGGCTATCATTGGTCCTCAGACATCAATAATGGCTCATGTACTGTCTCATCTT 581
Query 446 GCAAATGAGCTTAGTGTGCCTATGCTGTCATTCACGGCTTTAGACCCTAGCCTATCGGCG 505
|||||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||
Sbjct 582 GCAAATGAGCTTAGTGTGCCTATGTTGTCATTCACAGCTTTAGACCCTAGTCTCTCGGCG 641
Query 506 CTCCAGTTCCCGTTCTTTGTCCAAACAGCACCTAGCGATCTCTTTTTAATGCGTGCCATT 565
|| |||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||||
Sbjct 642 CTTCAGTTCCCGTTCTTTGTCCAGACAGCACCTAGTGATCTCTTTCTGATGCGTGCCATT 701
Query 566 GCGGAAATGATAAGTTACTACGGTTGGTCAGAGGTGGTTGCATTGTACAATGATGATGAC 625
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 702 GCGGAAATGATAAGTTACTACGGTTGGTCAGAGGTGATTGCATTGTATAATGATGATGAC 761
Query 626 AACAGTAGAAACGGTATAACAGCCTTAGGCGATGAGCTCGAAGGAAGGCGCTGCAAGATT 685
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 762 AACAGTAGAAACGGTATAACAGCTTTAGGCGATGAGCTCGAAGGAAGGCGCTGCAAGATT 821
Query 686 TCATACAAGGCTGTGCTTCCTTTGGATGTGGTGATTACGAGTCCTCGTGAGATCATTGAT 745
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 822 TCATACAAGGCTGTGCTTCCTTTGGATGTGGTGATTACGAGTCCTCGTGAGATTATAAAT 881
Query 746 GAGTTGGTTAAGATTCAAGGGATGGAATCTCGGGTTATCATTGTGAACACTTTCCCTAGA 805
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 882 GAGTTGGTTAAGATTCAAGGGATGGAATCTCGGGTAATCATTGTGAACACTTTCCCTAAA 941
Query 806 ACAGGTAGGATGATCTTTGAGGAAGCCCAGAAGCTTGGCATGATGGAGAAAGGCTATGTT 865
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 ACAGGTAAGAAAATCTTTGAGGAAGCCCAGAAGCTTGGCATGATGGAGAAAGGCTATGTT 1001
Query 866 TGGATAGCTACAACTTGGTTGACTTCTCTGTTAGATTCAGTTAACCCGTTGCCTTCCAAG 925
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct 1002 TGGATAGCTACAACTTGGTTGACTTCTCTGTTAGATTCTGTTAACCCGTTACCTGCCAAG 1061
Query 926 AATGCTGAATCTCTTAGAGGAGTGCTCACTCTTCGTATTCACACACCAAATTCAAGAAAG 985
| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||
Sbjct 1062 ACTGCTGAATCTCTTAGAGGCGTGCTTACTCTTCGTATTCACACGCCAAATTCAAAAAAG 1121
Query 986 AAAAAAGATTTTGTGGCACGGTGGAACAAGTTGAGTAATGGGACTGTCGGTTTAAACGTT 1045
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1122 AAAAAAGATTTCGTGGCACGGTGGAACAAGTTGAGTAACGGGACTGTCGGTTTAAACGTT 1181
Query 1046 TATGGACTTTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGACACTTCTA 1105
||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1182 TATGGTCTCTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGAGACTTCTA 1241
Query 1106 GATAGCGGAGCTAATATTTCCTTCTCGAGCGACCCAAAGTTAACCAGCATGACGGGAGGA 1165
|||||| ||||||| ||||||||||| || |||||||||||||||||||||| |||||||
Sbjct 1242 GATAGCAGAGCTAACATTTCCTTCTCTAGTGACCCAAAGTTAACCAGCATGAAGGGAGGA 1301
Query 1166 GGGTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTAT 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1302 GGGTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTAT 1361
Query 1226 ATTGTGAATACAAACATGACTGGTCTTACAGGTCAAATACACTTTCTTCCTGACAGATCA 1285
|||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 1362 ATTGTGAATACAAATATGACTGGTGTTACAGGTCAAATACAGTTTCTTCCTGACAGATCA 1421
Query 1286 ATGATACAGGCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGG 1345
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 ATGATACAGCCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGG 1481
Query 1346 TATTGGTCTAACCATTCTGGGCTCTCTATTATACCTCCTGAGTCACTATACAATAAGCCT 1405
||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |
Sbjct 1482 TATTGGTCTAACCATTCCGGGCTCTCTATTATACCTCCAGAGTCACTATACAAAAAGCTT 1541
Query 1406 TCAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCT 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 TCAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCT 1601
Query 1466 GTGACGCCACGTGGATGGGTTTTTCCTAACAACGGGAGAAGATTGAGAATCGGTGTACCC 1525
| ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1602 GAGACACCACGTGGTTGGGTTTTTCCTAACAACGGGAGACGATTGAGAATCGGTGTACCC 1661
Query 1526 GATAGAGCAAGTTTCAAGGAATTTGTGTCAAGGGTGGATGGAAGCAACAAAGTGCAAGGG 1585
|||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1662 GATAGAGCAAGTTTTAAGGAGTTTGTGTCAAGGTTGGATGGAAGCAACAAAGTGCAAGGG 1721
Query 1586 TATGCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAG 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 TATGCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAG 1781
Query 1646 TTCGTCCTTTTTGGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGTC 1705
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1782 TTCGTCCTATTTGGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGTC 1841
Query 1706 ACTACCGGGGTATTTGATGCTGTTGTAGGAGACATAGCTATTGTTACAAAACGAACAAGG 1765
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1842 ACTATTGGGGTATTTGATGCTGTTGTAGGAGACATAGCTATTGTTACGAAACGAACAAGG 1901
Query 1766 ATTGTGGATTTCACTCAGCCATACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGTCACA 1825
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1902 ATTGTGGATTTCACTCAGCCTTACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGTCACA 1961
Query 1826 AAGCTAAACGATACTCCGTGGGCGTTCTTACGCCCTTTTACACCTCCAATGTGGGCTGTT 1885
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1962 AAGCTAAATGATACTCCGTGGGCGTTTTTACGCCCTTTTACACCTCCAATGTGGGCTGTT 2021
Query 1886 ACAGCAGCCTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAATCAAC 1945
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2022 ACAGCAGCTTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAATCAAC 2081
Query 1946 GATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTTAGTAAACAGC 2005
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2082 GATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTT------CAGC 2135
Query 2006 TTCTCCACAATGTTTTTCTCCCACAGAGAGAACACAGTGAGCACACTCGGTCGTGCTGTG 2065
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2136 TTCTCCACGATGTTTTTCTCCCACAGAGAGAACACAGTGAGTACACTCGGTCGTGCTGTT 2195
Query 2066 CTGCTGATCTGGCTATTTGTGGTACTGATTATAACTTCAAGCTACACAGCGAGTCTTACA 2125
||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 2196 CTGCTCATCTGGCTATTTGTGGTACTAATCATAACATCAAGCTACACAGCGAGTCTTACA 2255
Query 2126 TCGATTCTTACAGTGCAACAGCTAAACTCACCGATCAGAGGAGTAGACACACTCATCAGC 2185
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2256 TCGATTCTTACAGTGCAACAGCTAAACTCACCAATCAGAGGAGTAGACACACTCATCAGC 2315
Query 2186 AGCAGTGGACGAGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACATGATTGATGAG 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2316 AGCAGTGGACGAGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACATGATTGATGAG 2375
Query 2246 CTTAACATCGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATACGCTGCAGCT 2305
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2376 CTTAACATTGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATACGCTGCAGCT 2435
Query 2306 CTTCAAAACGGAACTGTTGCTGCAATTGTCGATGAACGCCCTTACATTGATCTCTTCCTC 2365
||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||
Sbjct 2436 CTTCAAAACGGAACTGTTGCTGCAATTGTTGATGAGCGTCCTTACGTTGATCTCTTCCTC 2495
Query 2366 TCGGAATTTTGCGGATTTGCCATTAGAGGCCAAGAATTCACCAGAAGTGGCTGGGGATTT 2425
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2496 TCAGAATTCTGCGGATTTGCCATTAGAGGCCAAGAATTCACCAGAAGTGGCTGGGGATTT 2555
Query 2426 GCATTTCCAAGAGACTCTCCATTAGCAGTCGACATGTCAACCGCGATCTTAGGTCTATCT 2485
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2556 GCATTTCCAAGAGACTCTCCATTAGCAATCGACATGTCAACCGCGATCTTAGGTCTATCA 2615
Query 2486 GAGACGGGACAGCTTCAAAAGATTCATGACAAGTGGCTTTCAAGATCTAACTGCAGTAAC 2545
|| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2616 GAAACCGGACAGCTTCAAAAGATCCATGACAAGTGGCTTTCAAGATCTAACTGCAGTAAC 2675
Query 2546 CAGAAGGGTTCAGAGTCAGATGAGGATTCAGAACAGCTTAAACTCCGTAGCTTCTGGGGA 2605
| || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 2676 CTCAACGGTTCAGTGTCAGATGAAGATTCAGAACAGCTTAAACTCCGAAGCTTCTGGGGA 2735
Query 2606 TTATTCCTTGTGTGTGGGATCGCTTGTTTTATCGCTCTTTTCATCTACTTCTTCA-GAAT 2664
||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || |
Sbjct 2736 TTATTCCTTGTGTGTGGGATCTCTTGTTTTATCGCTCTCTTCATCTACTTCTTCAAGA-T 2794
Query 2665 AGTCCGCGACTTCTGGCGCCACAGCAAGCCTGAGGAAGAAGCTACAGTACCTTCACCAGA 2724
|||||||||||||| |||||| |||| ||| |||||||| |||||||||||||||||
Sbjct 2795 AGTCCGCGACTTCTTCCGCCACGGCAAATATGATGAAGAAGCCACAGTACCTTCACCAGA 2854
Query 2725 AAGTTCACGTTCTAAAACATTGCAGAGATTTTTAGCTTATTTTGATGAAAAAGAAGAAGA 2784
|||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||
Sbjct 2855 AAGTTCACGTTCTAAATCATTGCAGACATTTCTAGCTTATTTTGATGAAAAAGAAGACGA 2914
Query 2785 AACCAAGAGAAGGTTGAAGCGTAAGCGAAACGATGATCTTTCTTTACGGCCTTCTAGACC 2844
| ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 2915 ATCCAAGAGAAGGATGAAGCGTAAACGAAACGATGATCTTTCTTTAAAGCCTTCTAGACC 2974
Query 2845 GGTATGACAGATCCATCAATACTCAAGCATGAAAGATGAAGAAATGCAGACACA------ 2898
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2975 AATATGACAGATCCATCAAGACTCAAGCATGAAAGATGAAGAAATGCAGACACACATACC 3034
Query 2899 -------------GTAGAATGCAGATATTGATTGAAACTATACTTCAAGAATAAACCTTG 2945
||||||||||||| |||||| |||| |||||||||||||| |||||
Sbjct 3035 TCATACTTATATAGTAGAATGCAGATTTTGATTTTAACTGTACTTCAAGAATAAGCCTTG 3094
Query 2946 AAGGAATACTGAACATTTTTTAACCACAGAAAGT 2979
||| ||||| |||||||||||||||| |||||||
Sbjct 3095 AAG-AATACGGAACATTTTTTAACCAAAGAAAGT 3127
> AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutamate
receptor 2 | chr2:7504756-7508394 FORWARD LENGTH=3008
Length=3008
Score = 2054 bits (1112), Expect = 0.0
Identities = 2244/2775 (81%), Gaps = 139/2775 (5%)
Strand=Plus/Plus
Query 124 GGTTCTGTTGAGCTTCATTGTTCTTCTTGGTGATGGGAT--TA-TTTCAGAGGGAGCTTC 180
|||||| ||||||||||| || ||||||||| |||| | || ||||||||||||||||
Sbjct 123 GGTTCTATTGAGCTTCATCATTGTTCTTGGTGGTGGGTTGCTACTTTCAGAGGGAGCTTC 182
Query 181 -A-----AGGCCT-C-GTTATGTTGATGTTGGAGCAATATTCAGTTTAGGGA-C-TTTAC 230
| |||||| | |||| || | ||||| || ||||| ||||| | | | |||
Sbjct 183 TAGTTCTAGGCCTCCTGTTA--TTAAAGTTGGTGCTATATTTGGTTTAAACACCATGTAC 240
Query 231 ATGGTGAAGTTACAAATATTGCCATGAAAGTTGCAGAGGGTGATGTAAATTCTGATCCTC 290
|||||| | ||||||| ||| | |||| ||| |||| ||||| || |||||||||
Sbjct 241 --GGTGAAACTGCAAATATCGCCTTTAAAGCTGCTGAGGAAGATGTTAACTCTGATCCTA 298
Query 291 TCTTCCTTGGTGGATCAAAATTGCGTATAACGACGTATGATGCCAAGCGTAATGGATTCC 350
||||||||||||||| |||||||| || || | ||||||| || |||| ||| ||||
Sbjct 299 GCTTCCTTGGTGGATCGAAATTGCGGATTTTGATGAATGATGCTAAACGTAGTGGCTTCC 358
Query 351 TCACCATCATGGGAGCATTGCAATTCATGGAGACTGATGCT-GTGGCTATCATTGGTCCT 409
||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||
Sbjct 359 TCAGCATCATGGGAGCATTGCAATTCATGGAGACTGATG-TAGTGGCTATAATTGGTCCA 417
Query 410 CAGACATCAATAATGGCTCATGT-TCTGTCTCATCTTGCAAATGAGCTTAGTGTGCCTAT 468
||||||||||||||||||||||| | ||||||||||||| |||||||||| ||| || ||
Sbjct 418 CAGACATCAATAATGGCTCATGTGT-TGTCTCATCTTGCCAATGAGCTTACTGTTCCGAT 476
Query 469 GCTGTCATTCACGGCT-TTAGACCCTAGCCTATCGGCGCTCCAGTTCCCGTTCTTTGTCC 527
| ||||||| || ||| || ||||||| ||| || | ||||| ||||| ||||||||||
Sbjct 477 GTTGTCATTTACAGCTCTT-GACCCTACCCTCTCTCCACTCCAATTCCCATTCTTTGTCC 535
Query 528 AAACAGCACCTAGCGATCTCTTTTTAATGCGTGCCATTGCGGAAATGATAAGTTACTACG 587
||||||||||||| ||||| ||| | |||||||||||||| || ||||| | |||||| |
Sbjct 536 AAACAGCACCTAGTGATCTGTTTCTGATGCGTGCCATTGCAGAGATGATCACTTACTATG 595
Query 588 GTTGGTCAGAGGTGGTTGCATTGTACAATGATGATGACAACAGTAGAAACGGTATAACAG 647
| |||||||| ||||| ||||| || ||||||||||| || |||||||| || | ||||
Sbjct 596 GCTGGTCAGATGTGGTGGCATTATATAATGATGATGATAATAGTAGAAATGGCGTTACAG 655
Query 648 CCTTAGGCGATGAGCTCGAAGGA-AGGCGCTGCAAGATTTCATACAAGGCTGTGCTTCCT 706
| |||||||||||||| ||| || ||||| ||||||||||| |||||||| || ||||||
Sbjct 656 CGTTAGGCGATGAGCTTGAA-GAGAGGCGTTGCAAGATTTCTTACAAGGCAGTACTTCCT 714
Query 707 TTGGATGTGGTGATTACGAGTCCTCG-TGAGATCATTGATGAGTTGGTTAAGATTCAAGG 765
|||||||| |||||||| ||||| | |||||| || || |||||| ||||||| | ||
Sbjct 715 TTGGATGTTGTGATTACTAGTCC-AGTTGAGATTATAGAGGAGTTGATTAAGATAC-GGG 772
Query 766 G-ATGGAATCTCGGGTTATCATTGTGAACACTTTCCCTAGA-ACAGGTAGGATGATCTTT 823
| ||||| |||||||| ||| |||||||||||||||| | | ||||| | ||||||||||
Sbjct 773 GAATGGAGTCTCGGGTAATCGTTGTGAACACTTTCCC-AAATACAGGCAAGATGATCTTT 831
Query 824 GAGGAAGCCCAGA-AGCTT-GGCATGATGGAGAAAGGCTATGTTTGGATAGCTACAACTT 881
|||||| |||| || || || |||||||||||||| ||||||||||||||||||||||
Sbjct 832 AAGGAAG--CAGAGAGATTAGGGATGATGGAGAAAGGTTATGTTTGGATAGCTACAACTT 889
Query 882 GGTTGACTTCTCTGTTAGATTC-AGTTAACCCGTTGCCTTCCAAGAATGCTGAATCTCTT 940
||||| ||||| || ||||||| | || || ||| | || | ||| | | ||
Sbjct 890 GGTTGTCTTCTGTGCTAGATTCAAATT-TGCCTTTGGATACC-A-AAT--T--A-GTC-- 939
Query 941 AGA-GGAGTGCTCACTCTTCGTATTCACACACCAAATTCAAGAAAGAAAAAAGATTTTGT 999
| | ||||| || || || ||| ||||||| ||| |||| |||||||| | || ||||
Sbjct 940 A-ATGGAGTTCTTACACTGCGTCTTCACACGCCAGATTCTAGAAAGAAGAGGGACTTTGC 998
Query 1000 GGCACGGT-G--GAACAAGTTGAG---TAATGGGACTGTCGGTTTAAACGTTTATGGACT 1053
||||||| | |||||||||||| |||| |||| | || ||||| || ||||| ||
Sbjct 999 AGCACGGTGGAAGAACAAGTTGAGTAATAATAAGACTATTGGGTTAAATGTCTATGGTCT 1058
Query 1054 TTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGACACTTCTAGATAGC-G 1112
||||||||||||||||||||||||||||||||||| |||||||||||| | || ||| |
Sbjct 1059 GTATGCTTATGATACTGTCTGGATCATTGCTCGAGCCGTTAAGACACTTTTGGA-AGCTG 1117
Query 1113 GAGCTAATATTTCCTTCTCGAGCGACCCAAAGTTAACCAGCATGACGGGAGGAGG-GTCA 1171
||| |||| |||| ||||| | || |||||||| |||| ||| || | ||| ||
Sbjct 1118 GAGGTAATCTTTCTTTCTCCAATGATGCAAAGTTAGGCAGCTTGAAAGGTG-AGGCGT-- 1174
Query 1172 CTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTATATTGTG 1231
|||||||| ||||||| |||| |||||| |||||||||||| |||||||||||||||||
Sbjct 1175 -TGAATCTAAGTGCATTAAGCAGATTTGATCAAGGATCACAACTTCTTGATTATATTGTG 1233
Query 1232 AATACAAACATGACTGGTCTTACAGGTCAAATACACTTTCTTCCTGACAGATCAATGATA 1291
||||||| ||| ||||||| || |||| | || |||| ||| |||||||||||| ||
Sbjct 1234 CATACAAAGATGTCTGGTCTAACTGGTCCGGTTCAATTTCATCCAGACAGATCAATGCTA 1293
Query 1292 CAGGCCT-CATATGACATCATAAACGTGGTTGATGAC-GGGTTTAGGCAGATAGGGTATT 1349
||| ||| ||||||| || || ||| ||||||||||| ||||| | || ||||| || |
Sbjct 1294 CAG-CCTTCATATGATATTATCAACTTGGTTGATGACCGGGTTCAC-CAAATAGGTTACT 1351
Query 1350 GGTCTAACCATTCTGGGCTCTCTATTATACCTCCTGAGTCACTATACAATAAGCCTTCAA 1409
|||||||| ||||||| || |||||| |||| ||||| ||| | |||| || ||| | |
Sbjct 1352 GGTCTAACTATTCTGGTCTTTCTATTGTACCGCCTGAATCATTTTACAGCAAACCTCCTA 1411
Query 1410 ATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCTGTGA 1469
| ||||| ||||||||||||||||||||| ||| |||||||||||||| ||||| || |
Sbjct 1412 ACCGTTCTAGCTCAAACCAACATCTGAACTCTGTAACTTGGCCTGGTGGTACTTCAGTTA 1471
Query 1470 CGCCACGTGGATGGGTTTTTCCTAACAACGGGAGAAGATTGAGAATCGGTGTACCCGATA 1529
|||| ||||||||| |||||| |||||| || || | | ||||| ||||| || ||||
Sbjct 1472 CGCCTCGTGGATGGATTTTTCGTAACAATGGAAGGCGGCTAAGAATTGGTGTTCCTGATA 1531
Query 1530 GAGCAAGTTTCAAGGAATTTGTGTCAAGGGTGGATGGAAG---CAACAAAGTGCAAGGGT 1586
||||||| |||||||| ||||| |||||||| ||||||| ||||||||| ||||| |
Sbjct 1532 GAGCAAGCTTCAAGGACTTTGTTTCAAGGGTCAATGGAAGTAGCAACAAAGTTCAAGGAT 1591
Query 1587 AT-GCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAG 1645
|| || |||||||| ||||||||||| || |||||| ||||||||||||||||||| |||
Sbjct 1592 ATTGC-ATTGATGTATTTGAAGCTGCAGTGAAACTGCTTTCTTATCCGGTTCCTCACGAG 1650
Query 1646 TTCGTCCTTTTT-GGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGT 1704
||| || ||||| ||||| ||| | | ||| ||||||| |||||| | |||||||| ||
Sbjct 1651 TTCATC-TTTTTCGGAGATGGTTTGACGAATCCAAACTACAATGAGCTGGTCAACAAGGT 1709
Query 1705 CACTACCGGGGT--A-TTTGATGCTGTTGTAGGAGACATAGCTATTGTTACAAAACGAAC 1761
||| || ||||| | ||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct 1710 CACCACTGGGGTTGACTTTGATGCTGTTGTAGGCGACATAGCCATTGTCACCAAACGGAC 1769
Query 1762 AAGGATTGTGGATTTCACTCAGCCATACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGT 1821
||||||||||||||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct 1770 CAGGATTGTGGATTTCACCCAGCCATACATTGAGTCAGGCCTTGTCGTTGTTGCTCCTGT 1829
Query 1822 CACAA-AGCTAAACGATACTCCGTGGGCGTTCTTACGCCCTTTTACACCTCCAATGTGGG 1880
||||| | || ||||| | ||| ||||| || |||||||| ||||| | ||| |||||||
Sbjct 1830 CACAAGA-CTTAACGAAAATCCTTGGGCCTTTTTACGCCCGTTTACTCTTCCTATGTGGG 1888
Query 1881 CTGTTACAGCAGCCTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAA 1940
| || |||||| | ||||| | || |||||| | | |||||||||||||||||| | |
Sbjct 1889 CAGTAACAGCATCTTTTTTTGTTATTGTTGGAGCTGCAATATGGATTCTTGAACACCGTA 1948
Query 1941 TCAACGATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTTAGTAA 2000
| || |||||||| || || || ||||||| ||| || |||| ||||||||||| |
Sbjct 1949 TAAATGATGAGTTTCGTGGTCCACCAAGGAGACAGATCATTACCATTCTCTGGTTC--A- 2005
Query 2001 ACAGCTTCTCCACAATGTTTTTCTCCCACAGAGAGAAC-ACAGTGAGCACACTCGGTCGT 2059
| ||| || || |||||||||||||| ||||||| | ||||| |||||||| ||||||
Sbjct 2006 -C--CTTTTCGACGATGTTTTTCTCCCATAGAGAGA-CTACAGTTAGCACACTTGGTCGT 2061
Query 2060 GCTG-TGCTGCTGATCTGGCTATTTGTGGTACTGATTATAACTTCAAGCTACACAGCGAG 2118
|| |||| ||||| ||||| |||||||| ||||| || || || ||||||||||||||
Sbjct 2062 A-TGGTGCTTCTGATATGGCTTTTTGTGGTTCTGATCATTACATCTAGCTACACAGCGAG 2120
Query 2119 TCTTACATCGATTCTTACAGTGCAACAGCTAAACTCACCGATCAGAGGAGTAGACACACT 2178
||| ||||| || ||||||||||||||||| || ||||| || | ||||||||| |||||
Sbjct 2121 TCTCACATCAATACTTACAGTGCAACAGCTTAATTCACCTATAAAAGGAGTAGATACACT 2180
Query 2179 CATCAGCAGCAGTGGACG-AGTTGGGTTTC-AGGTAGGTTCTTATGCAGAAAACTACATG 2236
|||||| |||| ||| || | |||| |||| |||| ||||||| ||| ||||||||||||
Sbjct 2181 CATCAGTAGCACTGGTCGTA-TTGG-TTTCCAGGTTGGTTCTTTTGCTGAAAACTACATG 2238
Query 2237 ATTGATGAGCTTAACATCGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATAC 2296
| |||||||||||||| ||||| ||||||||||| || |||| ||| ||| |||||||
Sbjct 2239 ACCGATGAGCTTAACATTGCCAGCTCCAGACTTGTGCCTCTCGCCTCCCCTGAAGAATAT 2298
Query 2297 GCTGCA-GCTCTTCAAAACGGAACTGTTGCTGCAATTGTCGATGAACGCCCTTACATTGA 2355
||| | || |||||||| || |||||||| || ||||| |||||||| ||||| |||||
Sbjct 2299 GCTA-ATGCGCTTCAAAATGGCACTGTTGCAGCGATTGTTGATGAACGTCCTTATATTGA 2357
Query 2356 TCTCTTCCTCTCGGAATTT-TGCG-GATTTGCCATTAGAGGCCAAGAATTCACCAGAAGT 2413
|||||||||||| || || || | |||||||| ||||||||||||||||||||| |
Sbjct 2358 TCTCTTCCTCTCAGA-TTACTGTAAG-TTTGCCATCAGAGGCCAAGAATTCACCAGATGC 2415
Query 2414 GGCTGGGGATTTGCATTTCCAAGAGACTCTCCATTAGCAGTCGACATGTCAACCGCGAT- 2472
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 2416 GGTTGGGGATTTGCATTCCCAAGAGACTCTCCTTTAGCAGTTGACATGTCAACCGCGATT 2475
Query 2473 CTTAGGTCTATCTGAGACGGGACAGCTTCAAAAGATTCATGACA-AGTGGCTTTC-AAGA 2530
||| |||||||| || || ||| ||||||| ||||| |||||| | |||||||| || |
Sbjct 2476 CTT-GGTCTATCCGAAACTGGAGAGCTTCAGAAGATCCATGACCGA-TGGCTTTCGAA-A 2532
Query 2531 TCTAACTGCAGTAACCAGAA-GGGT-TCAGAGTCAGATGAGGATTCAGAACAGCTTAAAC 2588
|| |||||||| | || | | |||| |||| |||| ||| | |||||||||| || |
Sbjct 2533 TCCAACTGCAGCAGCCCGCATGGGTCTCAG--TCAGGTGAC--T-CAGAACAGCTCAA-C 2586
Query 2589 -TCCGTAGCTTCTGGGG-ATTATTCCTTGTGTGT-GGGATCGCTTGTTTTATCGCTCT-T 2644
| | |||||||||||| || ||||||||| || ||||| || ||| | ||||||| |
Sbjct 2587 GTGCATAGCTTCTGGGGTATG-TTCCTTGTG-GTTGGGATAGCCTGTCTCGTCGCTCTCT 2644
Query 2645 TTCATCTACTTCTTCAGAATAGTCCGCGACTTCTGGC---GCCACAGC--AAGCC-T-G- 2696
|| ||| ||||||||| |||| ||||||||||||| | | |||| | ||| | |
Sbjct 2645 TT-ATCCACTTCTTCAAAATAATCCGCGACTTCTG-CAAAGACACACCTGAAGTAGTAGT 2702
Query 2697 AGGAAGAAGCTACAGTACCTTCACCAGAAAG-TTCACGTTCTAA-AACAT-TGCAGAGAT 2753
|| ||||||||| ||||||||||| ||| |||||||| ||| || | | |||| |
Sbjct 2703 AG-AAGAAGCTA---TACCTTCACCA-AAATCTTCACGTT-TAACAA-AGCTACAGACTT 2755
Query 2754 TTTTAGCTTATT-TTGATGAAAAAGAAGAAGAAACCAAGAGAAGGTTGAAGCGTAAGCGA 2812
||||||| | || |||||||||| ||||||||||||||| ||||||| ||||| || ||
Sbjct 2756 TTTTAGCAT-TTGTTGATGAAAAGGAAGAAGAAACCAAGCGAAGGTTAAAGCGCAAAAGA 2814
Query 2813 AACGATGATCTTTCT 2827
||| | |||| ||||
Sbjct 2815 AACAACGATCATTCT 2829
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149045987653
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5