BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491124
Length=1354
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35250.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 2039 0.0
> AT4G35250.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:16771171-16773364 REVERSE LENGTH=1513
Length=1513
Score = 2039 bits (1104), Expect = 0.0
Identities = 1217/1272 (96%), Gaps = 6/1272 (0%)
Strand=Plus/Plus
Query 88 TCCTCCGGACGTCTCTCTTGGCGACGTTCTCTCACACCGGAAAATTCAATCTCGCTCTTC 147
|||||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 168 TCCTCCGGGCGTCTGTCTTGGCGACGTTCTCTCACACCGGAAAATACAATCCCGCTCTTC 227
Query 148 CCATCTTCCTCATCCTCATCCCTTAACCGGGAACGATTAATAGTAGTTCCGGTTACATGC 207
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 228 CCATCTTCCTCATCCTCATCCCTTAACCGGGAACGATCAATAGTAGTTCCGGTTACATGC 287
Query 208 AGTGCGGCAGCGGTTAATCTTGCTCCGGGGACACCAGTCCGACCCACGAGTATCTTGGTG 267
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 288 AGTGCTGCAGCGGTTAATCTTGCTCCGGGGACACCAGTCCGACCCACGAGCATCTTGGTG 347
Query 268 GTTGGAGCCACTGGAACTTTGGGAAGACAAATCGTCCGGAGAGCTTTAGATGAAGGTTAT 327
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 348 GTTGGAGCCACTGGAACTTTGGGAAGACAAATCGTCCGGAGAGCTTTAGATGAAGGGTAT 407
Query 328 GATGTCAGGTGTTTGGTCAGACCAAGACCAGCTCCCGCCGATTTCCTCCGTGATTGGGGC 387
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GATGTTAGGTGTTTGGTCCGACCAAGACCAGCTCCCGCCGATTTCCTCCGTGATTGGGGC 467
Query 388 GCCACCGTCGTCAATGCGGATCTTAGTAAACCAGAGACCATTCCAGCGACTTTGGTCGGA 447
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 468 GCCACCGTAGTCAATGCGGATCTTAGTAAACCGGAGACAATTCCGGCGACTTTGGTCGGG 527
Query 448 ATTCACACTGTAATTGATTGTGCCACGGGACGTCCTGAAGAACCCATCAAGACGGTAGAT 507
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 528 ATTCACACTGTAATTGATTGTGCCACGGGACGTCCTGAAGAACCTATCAAGACGGTAGAT 587
Query 508 TGGGAAGGAAAAGTTGCTCTGATACAATGTGCAAAGGCAATGGGGATTCAGAAATACGTC 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TGGGAAGGAAAAGTTGCTCTGATACAATGTGCAAAGGCAATGGGGATTCAGAAATACGTC 647
Query 568 TTTTACTCAATCCACAATTGCGATAAGCATCCCGAGGTTCCTCTCATGGAGATTAAGTAT 627
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 648 TTTTACTCAATCCACAATTGCGATAAGCATCCTGAGGTTCCTCTCATGGAGATTAAGTAC 707
Query 628 TGTACTGAGAAGTTTCTTCAGGAATCTGGTTTAAACCACATCACCATCCGGTTATGTGGT 687
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 708 TGCACTGAGAAGTTTCTTCAGGAATCTGGTTTAAACCACATCACCATTCGGTTATGTGGT 767
Query 688 TTCATGCAAGGTCTTATTGGTCAATATGCAGTTCCAATTTTGGAGGAAAAATCGGTTTGG 747
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 768 TTCATGCAAGGTCTTATTGGTCAATATGCAGTTCCAATTCTGGAGGAGAAATCGGTTTGG 827
Query 748 GGAACAGATGCACCAACGCGTATTGCTTACATGGACACACAGGATATTGCTAGGCTAACA 807
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 828 GGAACAGATGCACCAACGCGTGTTGCTTACATGGACACACAGGATATTGCTAGGCTGACA 887
Query 808 CTTATAGCTTTACGCAATGAGAAGATCAACGGAAAACTTCTGACATTCGCTGGCCCTCGT 867
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 888 CTTATAGCTTTACGTAATGAGAAGATCAATGGAAAACTTCTGACTTTCGCTGGCCCTCGT 947
Query 868 GCATGGACAACCCAGGAAGTAATAACACTATGTGAGAGACTTGCTGGGCAAGATGCAAAT 927
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 948 GCATGGACAACACAAGAAGTGATAACACTATGTGAGAGACTTGCTGGGCAAGATGCAAAT 1007
Query 928 GTCACAACCGTTCCAGTTTCTGTATTGAGAGTCACGCGTCAGTTAACTCGGTT-TTTCCA 986
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1008 GTCACAACCGTTCCAGTTTCTGTATTGAGAGTCACGCGTCAGTTAACTCGGTTCTTTCAA 1067
Query 987 GTGGACAAATGATGTCGCGGATAGACTGGCCTTCTCAGAGGTTCTTTCGAGCGACACGGT 1046
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1068 -TGGACAAATGATGTCGCGGATAGACTGGCCTTCTCAGAGGTTCTCTCGAGTGACACGGT 1126
Query 1047 CTTCTCTGTTCCGATGACTGAGACTAATAGTCTACTAGGTGTGGATCAGAAGGACATGGT 1106
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1127 CTTCTCTGCTCCGATGACTGAGACTAATAGTCTACTAGGTGTGGATCAGAAGGATATGGT 1186
Query 1107 GACTCTTGAAAAGTACTTGCAGGATTACTTCAGCAACATATTGAAGAAACTAAAGGATCT 1166
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 GACTCTAGAGAAGTACTTGCAGGATTACTTCAGCAACATATTGAAGAAACTAAAGGATCT 1246
Query 1167 AAAGGCACAATCCAAGCAATCAGACATCTACTTCTGAGTT-CTGACCTTGTGGTGTCTTG 1225
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 1247 AAAGGCACAATCCAAGCAATCAGACATCTACTTCTGAGTTTCTGACCTTGTAGTGTCTTC 1306
Query 1226 ATAAGATTCAACACTATTTAAAAACTGCATTTGCATCCATACTGTGAGCTCCATTGTTTC 1285
|||||||||||||||||||| |||||||||||||| |||||||||||| | | ||||| |
Sbjct 1307 ATAAGATTCAACACTATTTATAAACTGCATTTGCAACCATACTGTGAGATTCGTTGTTGC 1366
Query 1286 AATGTTCTTCAATGGCTACTGTGCTTCTTCTTGTAATTAAAGAGAATTAT---AATGTAA 1342
||||||||||||| || ||||||||||||||||||||||||||||||| |||||||
Sbjct 1367 TCTGTTCTTCAATGGTTATTGTGCTTCTTCTTGTAATTAAAGAGAATTATTGTAATGTAA 1426
Query 1343 ATGTAGCTTGAG 1354
||||||||||||
Sbjct 1427 ATGTAGCTTGAG 1438
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66666323760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5