BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491144 Length=1919 Score E Sequences producing significant alignments: (Bits) Value AT4G35090.1 | Symbols: CAT2 | catalase 2 | chr4:16700596-167033... 2841 0.0 AT1G20620.1 | Symbols: CAT3, SEN2, ATCAT3 | catalase 3 | chr1:7... 894 0.0 > AT4G35090.1 | Symbols: CAT2 | catalase 2 | chr4:16700596-16703325 REVERSE LENGTH=1930 Length=1930 Score = 2841 bits (1538), Expect = 0.0 Identities = 1785/1899 (94%), Gaps = 38/1899 (2%) Strand=Plus/Plus Query 35 CATCTCCTCGTTTTTGATAAACTCTCTCTGAATCTCTCCAAACTCTCTTCTCATC-AACT 93 |||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||| Sbjct 53 CATCTCCTCG-TTTTGATAAA-AATCTCTGAATCTCTCCAAGCTCTCTTCTCATCAAACC 110 Query 94 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 111 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 170 Query 154 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 230 Query 214 CTTCTTGAGGACTATCATCTGGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 273 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 231 CTTCTTGAGGATTACCATCTCGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 290 Query 274 GAGCGTGTCGTTCATGCCAGGGGAGCTAGTGCTAAAGGtttttttGAGGTCACTCATGAT 333 |||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct 291 GAGCGTGTGGTTCATGCCAGAGGAGCCAGTGCTAAAGGTTTCTTTGAGGTCACTCATGAT 350 Query 334 ATATCTAACCTCACTTGTGCTGATTTTCTCCGAGCTCCTGGTGTTCAGACTCCTGTCATT 393 || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 351 ATCTCTAACCTCACTTGTGCTGACTTTCTCCGAGCTCCCGGTGTTCAGACTCCTGTCATT 410 Query 394 GTGCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 453 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 411 GTCCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 470 Query 454 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGAAACTTTGATCTTGTTGGAAACAACTTT 513 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 471 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGGAACTTTGATCTTGTTGGAAACAACTTT 530 Query 514 CCGGtttttttCATCCGCGATGGGATGAAGTTCCCTGACATGGTTCACGCCCTTAAGCCG 573 || ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 531 CCTGTTTTCTTCATCCGCGATGGGATGAAGTTCCCTGACATGGTCCACGCTCTTAAGCCG 590 Query 574 AACCCGAAATCTCACATCCAGGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 633 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 591 AACCCAAAATCTCACATCCAAGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 650 Query 634 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 710 Query 694 CACATGGACGGTTCAGGTGTCAACACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 753 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 711 CACATGGATGGTTCAGGTGTCAATACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 770 Query 754 TACGTGAAGTTCCACTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCG 813 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 771 TACGTGAAGTTCCATTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCA 830 Query 814 ATTCGTGTTGGAGGAACCAACCACAGTCACGCGACTCAGGACTTGTATGACTCAATTGCT 873 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct 831 ATTCGTGTTGGAGGAACCAACCACAGTCATGCGACTCAAGACTTGTATGACTCTATAGCT 890 Query 874 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCAGCTGATGAAGAC 933 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 891 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCTGCTGATGAAGAC 950 Query 934 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAAGATATCTTACCTCTC 993 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 951 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAGGATATCTTGCCTCTT 1010 Query 994 CAACCTGTTGGTCGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1053 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 CAACCTGTTGGACGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1070 Query 1054 CAACTTGCCTTCTGCCCTGCAATCATTGTTCCC-GGGATACACTACTCAGACGACAAGCT 1112 |||||||| ||||| |||||||| ||||| ||| |||||||| |||||||| || ||||| Sbjct 1071 CAACTTGCTTTCTGTCCTGCAATTATTGT-CCCAGGGATACATTACTCAGATGATAAGCT 1129 Query 1113 GCTTCAAACCCGTGTCTTCTCCTATGCCGACACTCAGAGACACCGTCTTGGACCAAACTA 1172 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1130 GCTTCAAACCCGTGTCTTCTCCTATGCCGATACTCAGAGACACCGTCTTGGACCAAACTA 1189 Query 1173 CCTTCAGCTACCAGTCAATGCCCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1232 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1190 CCTTCAGCTGCCAGTCAATGCTCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1249 Query 1233 CATGAATTTCATGCACAGGGACGAGGAGGTCAATTACTTCCCATCAAGGTATGACCAGGT 1292 |||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct 1250 CATGAATTTCATGCACAGGGACGAGGAGGTTAACTACTTCCCGTCGAGGTATGACCAGGT 1309 Query 1293 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGCTCTGGAAAACGTGAGAGGTG 1352 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1310 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGTTCTGGAAAACGTGAGAGGTG 1369 Query 1353 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTTCATTTACACC 1412 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1370 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTACCTTTACACC 1429 Query 1413 AGAGAGGCAAGAACGCTTCATCCAGAGATGGATTGAAGCCTTATCCGACCCTCGCATCAC 1472 ||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||| Sbjct 1430 AGAGAGGCAAGAACGATTCATCCAGAGATGGATTGATGCCCTATCCGACCCACGCATCAC 1489 Query 1473 GCATGAAATCCGCAGCATCTGGATCTCTTACTGGTCTCAGGCTGACAAGTCTCTGGGACA 1532 ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 1490 GCATGAAATCCGCAGTATCTGGATCTCTTACTGGTCTCAGGCTGATAAGTCTTTGGGACA 1549 Query 1533 GAAGCTGGCAAGCCGTCTCAACGTGAGACCAAGCATCTAAAATGAGTGTTGCTAGTGAAA 1592 |||||||||||||||||| ||||||||||||||||||||||| ||||| | || Sbjct 1550 GAAGCTGGCAAGCCGTCTGAACGTGAGACCAAGCATCTAAAACGAGTG-----A---AA- 1600 Query 1593 GAAATTCTTGATTGGCCTTTGTGTGGTTCT-AATTAGCAGAGAAGAAAGAAGATGGGAAG 1651 ||| |||||||||||||||| ||||||| | ||||||||||||| || ||| |||||||| Sbjct 1601 GAA-TTCTTGATTGGCCTTTCTGTGGTTGTTAATTAGCAGAGAA-AA-GAAAATGGGAAG 1657 Query 1652 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTATGTGCTATGTTGTAATA 1711 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1658 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTCTGTGCTATGTTATAATA 1717 Query 1712 GTATCTGTTTAAAGACCaaaaaaaCCTTGTGTGTTGTTGTCACTCTCCTGTTTATCAGAA 1771 ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| Sbjct 1718 GTATCTGTTTAAAGACCAAAAGAACCTTGTGTGTTGTTGTGTCTCTC--GTTTATCAGAA 1775 Query 1772 TAATACATTATATACATGTTGAAGATTTATAATC-G-G-TGTTATTTGATGAAAGATCCT 1828 |||||||||||| ||| | |||||||||||||| | | ||||| |||||||||| |||| Sbjct 1776 TAATACATTATA--CAT-T-GAAGATTTATAATCCGTGGTGTTACTTGATGAAAGCTCCT 1831 Query 1829 TCTTCCTTGAAAAAATGTGACAGACATGTCT-A-ATGTT-CTCATATATTAACGAA-G-A 1883 |||||||||||| | ||||||| | | ||| | || || |||||||||||||||| | | Sbjct 1832 TCTTCCTTGAAAGATTGTGACATA--T-TCTTATATATTTCTCATATATTAACGAATGTA 1888 Query 1884 --CC-GTAAGAGCTGTCGACAAAGATGTGTTTTTTAGTC 1919 || |||||||||||||||||||| ||| ||||||||| Sbjct 1889 ATCCCGTAAGAGCTGTCGACAAAGACGTGATTTTTAGTC 1927 > AT1G20620.1 | Symbols: CAT3, SEN2, ATCAT3 | catalase 3 | chr1:7143067-7146540 FORWARD LENGTH=1901 Length=1901 Score = 894 bits (484), Expect = 0.0 Identities = 1192/1526 (78%), Gaps = 79/1526 (5%) Strand=Plus/Plus Query 85 TCATCAACTATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCC-TTCTT 143 ||||| || ||||||||||||||||||||||| | || | |||||| | ||| |||| Sbjct 68 TCATC-ACCATGGATCCTTACAAGTATCGTCCTTCAAGCGCGTACAACGC-CCCATTCTA 125 Query 144 CACCACCAACTCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAG 203 |||||| ||| ||||||||| || | ||||||| ||| ||| | ||| | ||| || Sbjct 126 CACCACAAACGGTGGTGCTCCAGTCTCCAACAACATCTCTTCCCTCACCATCGGAGAAAG 185 Query 204 AGGTCCTATCCTTCTTGAGGACTATCATCTGGTTGAGAAGCTTGCCAATTTCGA-CAGGG 262 |||||| | ||||||||||| |||||| || | |||||| |||| |||||| | ||| | Sbjct 186 AGGTCCGGTTCTTCTTGAGGATTATCATTTGATCGAGAAGGTTGCTAATTTC-ACCAGAG 244 Query 263 A-ACGGATTCCAGAGCGTGTCGTTCATGCCAG-GGGAGCTAGTGCTAAAGGtttttttGA 320 | | |||| || ||| | || |||||||| || || | | |||||||| ||||| ||||| Sbjct 245 AGA-GGATCCCTGAGAGAGTGGTTCATGCTAGAGGAATC-AGTGCTAAGGGTTTCTTTGA 302 Query 321 GGTCACTCATGATATATCTAACCTCACTTGTGCTGATTTTCTCCGAGCTCCTGGTGTTCA 380 ||||| ||||| || || |||||||||||||||||||||||| |||| ||||||||||| Sbjct 303 AGTCACCCATGACATTTCAAACCTCACTTGTGCTGATTTTCTCAGAGCCCCTGGTGTTCA 362 Query 381 GACTCCTGTCATTGTGCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTT 440 ||||| || ||||| || |||||||||||| |||| || |||| ||||| || ||| | Sbjct 363 AACTCCGGTTATTGTCCGTTTCTCCACCGTTGTCCACGAACGTGCCAGTCCTGAAACCAT 422 Query 441 GAGAGACCCTCGTGGTTTTGCAGTCAAGTTCTACACCAGAGAGGGAAACTTTGATCTTGT 500 ||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 423 GAGGGATATTCGTGGTTTTGCTGTCAAGTTTTACACCAGAGAGGGAAACTTTGATCTTGT 482 Query 501 TGGAAACAACTTTCCGGtttttttCATCCGCGATGGGATGAAGTTCCCTGACATGGTTCA 560 ||| |||||| |||||| || |||||||| |||||||| ||||||| || | || || Sbjct 483 TGGGAACAACACTCCGGTGTTCTTCATCCGTGATGGGATTCAGTTCCCGGATGTTGTCCA 542 Query 561 CGCCCTT-AAGCCGAACCCGAAATCTCACATCCAGGAGAACTGGAGAATCCTTGACTTCT 619 ||| || || || ||||||||| | ||||||| ||| ||||||| || || |||| | Sbjct 543 CGCG-TTGAAACCTAACCCGAAAACAAACATCCAAGAGTACTGGAGGATTCTGGACTACA 601 Query 620 TCTCCCACCACCCTGAAAGTTTGA--ACATGTTCACTTTCCTCTTCGATGATATCGGTAT 677 | |||||| ||||| |||||| ||||| | || | || |||||| | ||||| Sbjct 602 TGTCCCACTTGCCTGAGAGTTTGCTCACATGGTG-CTGGA-TGTTTGATGATGTTGGTAT 659 Query 678 CCCACAAGATTACAGGCACATGGACGGTT-CAGGTGTCAACACATACA-TGTTGATCAAC 735 ||||||||||||||||||||||| |||| | |||||| |||| |||| | || || | Sbjct 660 TCCACAAGATTACAGGCACATGGAGGGTTTC-GGTGTCCACACCTACACTCTT-ATTGCC 717 Query 736 AAAGCTGGCAAAGCTCACTACGTGAAGTTCCACTGGAAACCAACTTGTGG-AGTCAAGTC 794 ||| |||| |||| || || ||||||||||||||||||||||||||||| | ||||| Sbjct 718 AAATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCAACTTGTGGGA-TCAAGAA 776 Query 795 TCTTT-TGGAAGAAGATGCGATTCGT-GTTGGAGGAACCAACCACAGTCACGCGACTCAG 852 ||| || | ||||| || | || ||||||||| |||| ||||| ||||| ||| || Sbjct 777 TCTGACTG-ATGAAGAGGCCAAG-GTTGTTGGAGGAGCCAATCACAGCCACGCCACTAAG 834 Query 853 GA-CTTGTATGACT-CAATTGC-TGCTGGAAACTACCCTGAATGGAAGCTCTTT-ATCCA 908 || || | || | | ||||| | |||| |||||||| || ||||| || ||| ||||| Sbjct 835 GATCTCC-ACGA-TGCCATTGCAT-CTGGCAACTACCCCGAGTGGAAACT-TTTCATCCA 890 Query 909 AATCATTGATCCAGCTGATGAAGACAAGTTCGACTTTGACCCGCTCGATGTGACCAAGAC 968 | ||| ||||| || ||||| || ||||| ||||||||||| || ||||||||||||| Sbjct 891 GACCATGGATCCTGCAGATGAGGATAAGTTTGACTTTGACCCACTTGATGTGACCAAGAT 950 Query 969 CTGGCCTGAAGATATCTTACCTCTCCAACCTGTTGGTCG-TATGGTGT-TGAACAAGAAC 1026 ||||||||| ||||| || ||||| ||||| |||||||| | |||| | |||||| || | Sbjct 951 CTGGCCTGAGGATATTTTGCCTCTGCAACCGGTTGGTCGCT-TGGT-TCTGAACAGGACC 1008 Query 1027 ATTGACAACTTCTTTGCAGA-GAA--TGAGCAACTTGCCTTCTGCCCTGCAATCAT-TG- 1081 |||||||| ||||| || | ||| |||||| ||||| ||| ||| | || | || Sbjct 1009 ATTGACAATTTCTT--CA-ATGAAACTGAGCAGCTTGCGTTCAACCCGGG--TCTTGTGG 1063 Query 1082 TTCCCGGGATAC-ACTACTCAGACGACAAGCTGCTTCAAACCCGTG-TCTTCTCCT-ATG 1138 |||| || || | |||||||||||||||||||||| || | | |||| | || ||| Sbjct 1064 TTCCTGGAAT-CTACTACTCAGACGACAAGCTGCTCCAGTGTAG-GATCTT-TGCTTATG 1120 Query 1139 CCGACACTCAGAGACACCGTCTTGGACCAAACTACCTT-CAGCTACCAGTCAATGC-CCC 1196 |||||||||||||| || |||||||| || || || ||||| ||||||||||| ||| Sbjct 1121 GTGACACTCAGAGACATCGCCTTGGACCGAATTAT-TTGCAGCTTCCAGTCAATGCTCCC 1179 Query 1197 AAAATGTGCTCACCACAACAACCACCATGAGGGATTCATGAATTTCATGCACAGGGACGA 1256 ||| ||||||||||||||||| |||||||| || || ||||| ||||||||||| || || Sbjct 1180 AAA-TGTGCTCACCACAACAATCACCATGAAGGTTTTATGAACTTCATGCACAGAGATGA 1238 Query 1257 GGAGGTCAATTACTTCCCATCAAGGTATGA-CCAGGTTCGTCATGC--TGAGAA-GTATC 1312 |||| ||||||||| ||| |||| || ||| || | | || | ||| |||||| || || Sbjct 1239 GGAGATCAATTACTACCCCTCAAAGTTTGATCCTG-TCCG-C-TGCGCTGAGAAAGT-TC 1294 Query 1313 CAACTCCGCCTG-CTGTCTGCTCTGGAAAACGTG-AGAGGTGCATTATTGAGAAAGAGAA 1370 | || || | || || | |||||| || | || ||| | || |||||||||| Sbjct 1295 CCACCCCTACAAACTC-CTACACTGGAATTCGAACAAAG-TGCGTCATCAAGAAAGAGAA 1352 Query 1371 CAACTTCAAGGAGCCTGGAGAGAGATACCGTTCATTTACACCAGAGAGGCAAGA-ACGCT 1429 ||||||||| || ||||||| || ||| | |||| ||||||| |||||||| | | | Sbjct 1353 CAACTTCAAACAGGCTGGAGACAGGTACAGATCATGGGCACCAGACAGGCAAGACAGGTT 1412 Query 1430 TCATCCAGAGATGGATTGA-AGCCTTATCCGACCCTCG-CATCACGCATGAAATCCGCAG 1487 | | |||||||| | || | || ||| || || || | |||| || || |||||| | Sbjct 1413 TGTTA-AGAGATGGGTGGAGATTCT-ATCGGAGCCACGTC-TCACCCACGAGATCCGCGG 1469 Query 1488 CATCTGGATCTCTTACTGGTCTCAGGCTGA-CAAGTCTCT-GGGACAGAAGCTGGCAAGC 1545 |||||||||||||||||||||||||||||| | | || || ||||||||| || |||||| Sbjct 1470 CATCTGGATCTCTTACTGGTCTCAGGCTGATCGA-TC-CTTGGGACAGAAACTTGCAAGC 1527 Query 1546 CGTCTCAACGTGAGACCAAGCATCTA 1571 ||||| |||||||| ||||||||||| Sbjct 1528 CGTCTGAACGTGAGGCCAAGCATCTA 1553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95029631685 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5