BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491159
Length=2477
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34980.1 | Symbols: SLP2 | subtilisin-like serine protease 2... 3733 0.0
> AT4G34980.1 | Symbols: SLP2 | subtilisin-like serine protease
2 | chr4:16656691-16659339 REVERSE LENGTH=2649
Length=2649
Score = 3733 bits (2021), Expect = 0.0
Identities = 2329/2481 (94%), Gaps = 8/2481 (0%)
Strand=Plus/Plus
Query 1 TTTTCCTTTATAATTATGAGAGCACCAATGTCATGTCGGTAAAA----CCCCACTCActt 56
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 38 TTTTCCTTTATAATTATGAGAGCACCAATGTCATGTCGGTAAAACTCCCCCCACTCACTT 97
Query 57 cactccctccacttcttcaatggcttcctccatcatcgctcttcttctcttcctctcttc 116
||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 98 CACTCGCTCCACTCCTTCAATGGCTTCCTCCACCATCGTTCTTCTTCTCTTCCTCTCTTT 157
Query 117 tccgttcatctccttcGCCGCTGCTCAGACCGCGAAGACTTTCATTTTCCGTATCGATGG 176
|||||| ||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||
Sbjct 158 TCCGTTTATCTCTTTCGCAGCTTCTCAGGCCGCGAAGACTTTCATTTTCCGTATCGATGG 217
Query 177 TGGATCTATGCCTTCTATTTTCCCGACGCACTACCACTGGTACAGCACCGAGTTCGCCGA 236
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 218 TGGATCTATGCCTTCTATTTTCCCGACGCACTACCATTGGTATAGCACCGAGTTCGCCGA 277
Query 237 AGAATCTCGCATCCTCCATGTTTACCACACCGTCTTCCATGGATTCTCCGCCGTGGTTAC 296
||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 278 AGAATCTCGAATCGTCCATGTTTACCACACAGTCTTCCATGGTTTCTCCGCCGTTGTTAC 337
Query 297 TCCAGACGAAGCAGATAACCTCCGTAACCACCCAGCGGTTCTCGCTGTTTTCGAAGACCG 356
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 338 TCCAGATGAAGCAGATAATCTCCGTAACCACCCAGCAGTTCTTGCTGTTTTCGAAGACCG 397
Query 357 GCGTCGTGAGCTTCACACTACTCGTTCTCCTCAATTTCTAGGTCTACAAAACCAAAAAGG 416
||||| ||||||||||| || ||||||||||||||||| ||| ||||||||||||||||
Sbjct 398 ACGTCGAGAGCTTCACACCACACGTTCTCCTCAATTTCTTGGTTTACAAAACCAAAAAGG 457
Query 417 ACTCTGGTCAGAATCTGATTACGGATCAGACGTAATCATTGGCGTATTCGATACCGGAAT 476
||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 458 ACTATGGTCAGAATCTGATTACGGATCAGACGTAATCATTGGCGTTTTTGACACCGGAAT 517
Query 477 CTGGCCGGAGAGGAGGAGTTTCTCAGATCTCAACCTTGGTCCGATTCCAAAACGGTGGAG 536
||||||||| ||||||||||||||||||| ||||| ||||| ||||||||| |||||||
Sbjct 518 TTGGCCGGAGCGGAGGAGTTTCTCAGATCTTAACCTCGGTCCAATTCCAAAAAGGTGGAG 577
Query 537 AGGCGTTTGTGAATCCGGAGCCAGATTTGGTCCTCGGAACTGTAATCGGAAAATCGTCGG 596
||||||||| ||||||||||||||||| |||||||||||||||| || ||||| ||||
Sbjct 578 AGGCGTTTGCGAATCCGGAGCCAGATTCAGTCCTCGGAACTGTAACCGTAAAATTATCGG 637
Query 597 AGCAAGATTCTTCGCTAAGGGACAACAAGCCGCCGTTATCGGAGGAATCAACAAAACCGT 656
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 638 AGCAAGATTCTTCGCTAAGGGACAACAAGCCGCTGTAATCGGAGGAATCAACAAAACCGT 697
Query 657 TGAGTTTCTTTCTCCTCGTGACGCCGATGGACACGGTACTCACACTTCCTCAACCGCCGC 716
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 TGAGTTTCTATCTCCTCGTGACGCCGATGGACACGGTACTCACACTTCCTCAACCGCCGC 757
Query 717 TGGCCGTCACG-TTTTCAAGGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTG 775
||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 758 TGGCCGTCACGCTTTT-AAAGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTG 816
Query 776 TTGCTCCTAAAGCTCGTATCGCCGCCTACAAAGTCTGTTGGAAAGAATCCGGTTGTCTCG 835
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 817 TTGCTCCAAAAGCTCGTATCGCCGCCTACAAAGTCTGTTGGAAAGATTCCGGTTGTCTCG 876
Query 836 ATTCCGATATCCTCGCCGCCTTCGATGCCGCCGTCAGAGATGGTGTCGATGTCATATCGA 895
|||||||||| ||||||||||| |||||||| || ||||| |||||||| || |||||||
Sbjct 877 ATTCCGATATTCTCGCCGCCTTTGATGCCGCTGTTAGAGACGGTGTCGACGTTATATCGA 936
Query 896 TCTCAATCGGTGGTGGAGACGGGATTACTTCGCCGTATTACCTCGATCCAATCGCTATAG 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 TCTCAATCGGTGGTGGAGACGGGATTACTTCGCCGTATTACCTCGATCCAATCGCTATAG 996
Query 956 GCTCATACGGAGCCGCGTCGAAAGGAATCTTCGTCTCTTCCTCCGCCGGAAACGAAGGAC 1015
|||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 997 GCTCGTACGGCGCCGCGTCGAAAGGAATCTTCGTCTCTTCCTCTGCCGGAAACGAAGGAC 1056
Query 1016 CTAACGGTATGTCAGTTACAAACCTCGCGCCGTGGGTAACCACCGTTGGTGCTAGTACAA 1075
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 CTAACGGTATGTCAGTTACGAACCTCGCGCCGTGGGTAACCACCGTTGGTGCTAGTACAA 1116
Query 1076 TCGATCGGAATTTCCCCGCGGATGCAATTCTCGGTGACGGACATCGTCTCAGAGGCGTGT 1135
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 1117 TCGATCGGAATTTCCCAGCGGATGCTATTCTCGGCGACGGACATCGTCTCAGAGGAGTGT 1176
Query 1136 CTCTCTACGCCGGAGTTCCGTTAAACGGTCGTATGTTTCCGGTGGTTTATCCCGGCAAAT 1195
|||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1177 CTCTTTACGCTGGAGTACCTTTAAACGGTCGTATGTTTCCGGTGGTTTATCCCGGTAAAT 1236
Query 1196 CAGGAATGTCATCGGCGTCTCTATGTATGGAGAATACGCTCGATCCCAAGCATGTGAGGG 1255
| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct 1237 CGGGAATGTCATCAGCGTCTCTATGTATGGAGAACACGCTTGATCCGAAGCAAGTGAGGG 1296
Query 1256 GTAAGATTGTAATTTGTGATAGAGGAAGCAGTCCACGTGTAGCGAAGGGATTGGTTGTGA 1315
|||| || ||||| || |||||||||||||||||||| ||||| || |||||||||||||
Sbjct 1297 GTAAAATAGTAATCTGCGATAGAGGAAGCAGTCCACGCGTAGCCAAAGGATTGGTTGTGA 1356
Query 1316 AGAAAGCAGGCGGCGTCGGAATGATTCTCGCTAACGGCGCATCCAACGGTGAAGGATTAG 1375
|||||||||| || |||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 1357 AGAAAGCAGGTGGTGTCGGAATGATTCTCGCTAATGGAGCATCTAACGGTGAAGGATTAG 1416
Query 1376 TCGGAGATGCTCATCTTATCCCAGCCTGCGCCGTTGGGTCAAACGAAGGAGATAGAATCA 1435
||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct 1417 TCGGAGATGCTCATCTTATTCCAGCCTGTGCCGTTGGATCAAACGAAGGAGATAGAATCA 1476
Query 1436 AAGCTTATGCTTCTTCACATCCGAATCCAATTGCTTCAATCGATTTCAGAGGAACTATAG 1495
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1477 AAGCATATGCTTCTTCACATCCGAATCCAATTGCTTCAATTGATTTCAGAGGAACTATAG 1536
Query 1496 TTGGGATTAAACCGGCTCCGGTTATTGCTTCTTTCTCCGGTAGAGGACCAAACGGTTTAA 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 TTGGGATTAAACCGGCTCCGGTTATTGCTTCTTTCTCCGGTAGAGGACCAAACGGTTTAA 1596
Query 1556 GTCCGGAGATTCTTAAACCGGATTTGATTGCTCCCGGAGTTAACATCCTCGCCGCGTGGA 1615
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1597 GCCCGGAGATTCTTAAACCGGATTTGATTGCTCCCGGAGTTAACATCCTCGCCGCATGGA 1656
Query 1616 CCGACGCTGTTGGACCTACAGGTTTGCCGTCAGATCCAAGGAAAACGGAATTCAACATTC 1675
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 CAGACGCTGTTGGACCTACAGGTTTGCCGTCAGATCCAAGGAAAACGGAATTCAACATTC 1716
Query 1676 TCTCCGGTACTTCAATGGCGTGTCCTCACGTTAGTGGTGCGGCGGCGCTTCTCAAATCCG 1735
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 TCTCCGGTACTTCAATGGCATGTCCTCACGTTAGTGGTGCGGCGGCGCTTCTCAAATCCG 1776
Query 1736 CTCATCCGGATTGGAGCCCCGCCGCAATAAGATCGGCAATGATGACGACGACTAACCTCG 1795
||||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||||
Sbjct 1777 CTCATCCAGATTGGAGCCCTGCCGTGATACGATCGGCAATGATGACAACGACTAACCTCG 1836
Query 1796 TCGATAACTCTAACCGTTCGTTGATTGATGAATCCACCGGAAAATCAGCTACGCCTTATG 1855
|||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 1837 TCGATAACTCTAACCGCTCGTTGATCGATGAATCCACCGGGAAATCGGCTACGCCTTATG 1896
Query 1856 ATTACGGGTCGGGTCATTTAAATTTGGGTCGGGCTATGGATCCGGGTCTTGTTTACGATA 1915
|||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct 1897 ATTACGGGTCGGGTCATTTAAATTTGGGCCGGGCTATGAATCCGGGTCTTGTCTACGATA 1956
Query 1916 TAACCAACGATGATTACATTACGTTTCTTTGCTCCATCGGGTATGGGCCTAAGACGATTC 1975
|||| || ||||||||||||||||||||||||||||||||||| || || |||||||| |
Sbjct 1957 TAACTAATGATGATTACATTACGTTTCTTTGCTCCATCGGGTACGGACCAAAGACGATCC 2016
Query 1976 AAGTGATTACAAGAACGCCGGTGAGATGTCCGACGAGGAGGAAACCGTCGCCGGGGAATT 2035
||||||| |||||||| ||||||||||||||||||| ||||||||||| || |||||||
Sbjct 2017 AAGTGATAACAAGAACACCGGTGAGATGTCCGACGACCAGGAAACCGTCTCCCGGGAATT 2076
Query 2036 TGAATTATCCTTCGATCACGGCGGTGTTTCCTACCTC-TACAAGAGGATTGGTGAGCAAA 2094
|||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||
Sbjct 2077 TGAATTATCCTTCGATCACGGCGGTGTTTCCTAC-TAATAGAAGAGGATTGGTGAGTAAA 2135
Query 2095 ACTGTTATACGGACGGCGACAAATGTCGGGCAGGCGGAGGCGGTTTATCGGGCGAGGTTA 2154
||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||
Sbjct 2136 ACTGTTATAAGGACGGCGACGAATGTCGGGCAGGCTGAGGCGGTTTATCGGGCGAGGATA 2195
Query 2155 GAGTCGCCGAGAGGAGTGACGGTGACGGTGAAACCGCCAAGGCTTGTGTTTACTTCGGCC 2214
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 2196 GAGTCGCCGAGAGGAGTGACGGTGACAGTGAAACCACCTAGGCTTGTGTTTACTTCGGCC 2255
Query 2215 GTTAAGAGACGGAGCTATGCGGTTACGGTGACGGTTGATACAAGGAATGTTGTGTTGGGA 2274
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 2256 GTTAAGAGACGGAGCTATGCGGTTACAGTGACGGTTAATACAAGGAATGTTGTGTTGGGA 2315
Query 2275 GAAACAGGTGCTGCGTTTGGGTCGGTCACGTGGTTTGATGGTGGGAAACACGTGGTTCGG 2334
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2316 GAAACAGGTGCTGTGTTTGGGTCAGTCACGTGGTTTGATGGTGGGAAACACGTGGTTCGG 2375
Query 2335 AGCCCTGTTGTGGTGACCCAAATGGATACGTTGTGATTCCGGGTCGGGTTTTGGATGATC 2394
||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2376 AGCCCCATCGTGGTGACCCAAATGGATACGTTGTGATTCCGGGTCGGGTTTGGGATGATC 2435
Query 2395 GTGCGGTCATGACTCATGATCGTAAACCCTTTATGAGGTGTAGCAATAACTGTAGAATTT 2454
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2436 ATGCGGTCATGACTCATGATCGTAAACCCTTTATGTGGTGTAGCAATAACTGTAGAATTT 2495
Query 2455 TGAGTTAGTGGGCtttttttt 2475
||||||||| ||||||| |||
Sbjct 2496 TGAGTTAGTTGGCTTTTATTT 2516
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122909010350
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5