BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491161 Length=1150 Score E Sequences producing significant alignments: (Bits) Value AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-... 1677 0.0 > AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr4:16648605-16650897 FORWARD LENGTH=1186 Length=1186 Score = 1677 bits (908), Expect = 0.0 Identities = 1099/1184 (93%), Gaps = 41/1184 (3%) Strand=Plus/Plus Query 1 CTGAAGAAACACACTGCAATTGAGATCGATTTCGACTGTGAGTTAACTTTGATT------ 54 ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 2 CTGAAAAAACACACTGCAATTGAGATCGATTTCGACTGTAAGTGAACTTTGATTGCCGCG 61 Query 55 --G------C---TCGCTGGTCACAAGCTTTTCAGTGAATTCGATT-GCATAGAACTaga 102 | | |||| || |||||| |||||||||||||| ||| |||||||||| || Sbjct 62 AAGATTACTCAAATCGCCGGACACAAGTTTTTCAGTGAATTCCATTGGCATAGAACTCGA 121 Query 103 gagaaagagacacagagagagagagagaTCTAACACGAGTCGAAGTTTCTGACTTTTTCC 162 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 122 GAGAAAGAGACACAGAGAGAGAGAGAGATCTAACAAGAGTCAAAGTTTCTGACTTTTTCG 181 Query 163 CATTCtttttttGAGATCGAGTTCTGGTGTTTGTTGGCGTGTGAGATGAATTCTTAACAA 222 ||||| |||||||||||||||||| || |||||||||||||||||||||||||||| || Sbjct 182 CATTC--TTTTTGAGATCGAGTTCT-GTTTTTGTTGGCGTGTGAGATGAATTCTTAAGAA 238 Query 223 -G--GAAGAAGAAGAACGAAAGATGCGTAGAGAGATCTCGTTTTTGCTACAGCCCAGGTG 279 | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 GGAAGAAGAAGAAGAAGGAAAGATGCGTAGAGAGATCTCGTTTTTGCTACAGCCCAGGTG 298 Query 280 TCTTCTTCTCCTCGTTGTCCTAACGATTTTCCTCGTCTTCGCGCTCTTCAACTCCGGAAA 339 ||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 299 TCTTCTTCTTCTCGTTGCCCTAACGATTTTCCTCGTCTTCGCGCTCTTCAACACCGGAAA 358 Query 340 AGATGAGGAGAAGCAAGTAATCGAAGATCACGAAATCACCAACAGGGTTTTTCTCGATGT 399 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 359 AGATGAGGAGAAGCAAGTAATTGAAGATCATGAAATCACCAACAGGGTTTTTCTCGATGT 418 Query 400 TGATATTGACGGCCAACGCTTAGGCAGGATCGTTATCGGACTATATGGCACTGTTGTACC 459 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 419 TGATATTGATGGCCAACGCTTAGGCAGGATTGTTATCGGACTATATGGCACTGTTGTACC 478 Query 460 CAAAACTGTAGAAAATTTCAGGGCTTTATGCACAGGAGAGAAGGGGAAGACCTCAAGCGG 519 |||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct 479 CAAAACTGTAGAAAATTTCAGGGCTTTATGCACAGGGGAGAAGGGTAAAACCTCAAGCGG 538 Query 520 AAAGCCTTTACATTATAAGGGAACACCGTTTCATCGTATAATATCTGGATTTGTAATCCA 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 539 AAAGCCTTTACATTATAAGGGAACACCATTTCATCGTATAATATCTGGATTTGTAATCCA 598 Query 580 AGGAGGAGACATTATCCATGGTGATGGAAAAAGTAGTGAGTCAATCTATGGTGGTACCTT 639 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 599 AGGAGGAGACATTATCCATGGTGATGGAAAAAGTAGTGACTCAATCTATGGTGGAACCTT 658 Query 640 TCCTGACGAAAATTTCAAGATAAAGCATTCACACGCAGGTGTTGTAGCGATGGCTAATAC 699 |||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||| Sbjct 659 TCCTGACGAAAATTTCAAGATACAGCATTCACACGCAGGTATGGTAGCAATGGCTAATAC 718 Query 700 AGGACCGGATTCTAATGGCTCGCAGTTCTTTATCACTACTGTTAAGGCTAGCTGGTTGGA 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 AGGACCGGATTCTAATGGCTCGCAGTTCTTTATCACTACTGTTAAGGCTAGCTGGTTGGA 778 Query 760 AGGAGAACATGTGGTGTTTGGAAAGGTAATACAAGGAATGGACAATGTATTCGCCATTGA 819 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 779 AGGAGAACATGTGGTGTTGGGAAAGGTGATACAAGGAATGGACAATGTATTCGCCATTGA 838 Query 820 AGGTGGAGCTGGAACTTACAGTGGCAAACCCAGGAAGAAAGTTGTGATTGCTGATTCTGG 879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 AGGTGGAGCTGGAACTTACAGTGGCAAACCCAGGAAGAAAGTTGTGATTGCTGATTCTGG 898 Query 880 AGAGATCCCTAAAGACAAATGGGATGAAGAGAGATGACCAAGACAA-CCTAAGATACACA 938 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 899 AGAGATCCCTAAAGACAAATGGGATGAAGAGAGATGACAAAGACAAACCTAAGATACACA 958 Query 939 TCACTAC-A-AA-TCTGGTTCTGTTCCTGTGAGATTCTCTGTCTCTGTTTTTTCTTTCTA 995 |||||| | || ||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 959 GCACTACGACAAATCTGGTTCTGTTCCTGTGAGATTCT--GTCTCTGTATTTTCTTTCTA 1016 Query 996 TTTATAGTTTTGCACATGTGATGATCTGAATTCTGAACACAATGCCAATGTAGTTAGTGT 1055 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct 1017 TTTATAGTTTTGCACATGTGATGATCTGAATTCTGAACGCAATGTCACTGTAGTTAGTGT 1076 Query 1056 TTAAAG--G-------AAGCATCTGTAGCTTTTCACTTAAAAAGTTTTTCTAGACTTTAT 1106 |||||| | |||||||||||||||||||||| | ||||||||||||||||| Sbjct 1077 TTAAAGCTGGGCCTGGAAGCATCTGTAGCTTTTCACTTGAG--GTTTTTCTAGACTTTAT 1134 Query 1107 TGATATGATTTTTAGTTCAGTCTACTACAGTTATGTAGATATAT 1150 | ||||||||||||||||| |||||| ||||||||||||||||| Sbjct 1135 TTATATGATTTTTAGTTCACTCTACTTCAGTTATGTAGATATAT 1178 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56425412580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5