BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg491183
Length=2639
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxyl... 3847 0.0
AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine dec... 1738 0.0
> AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase
2 | chr4:16560062-16562969 REVERSE LENGTH=2908
Length=2908
Score = 3847 bits (2083), Expect = 0.0
Identities = 2493/2678 (93%), Gaps = 79/2678 (3%)
Strand=Plus/Plus
Query 1 TCTTCTTCATTTCCGTCTTCTCCGCTAGGTTTCCGTCTCTGTTTTTTCTTGCA-TTTCCC 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 18 TCTTCTTCATTTCCGTCTTTTCCGCTAGGTTTCCGTCTCTGTTTTTTCTTGCATTTTCCC 77
Query 60 CGTGAAATACTTCACATTCTCTCCTTTTCCTCTTTTTATTTCCTCACCACCTCAAA---- 115
| ||| | ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 78 C-AGAATTCCTTCACATTCTCTCCTTTTCCTCTTTTTAATTCCTCACCACCTCAAATTCT 136
Query 116 TC-----C-AA--CAGTTCTGCATGGTTGGGAGAATCTTTTAGAGAATTTTTGTTGGTCT 167
|| | || || |||||||||||||||||||||| ||||||||||||||||| | |
Sbjct 137 TCATAAACAAATCCACTTCTGCATGGTTGGGAGAATCTGTTAGAGAATTTTTGTTGTTGT 196
Query 168 TGGGTTCAGATTTGGAAAATTTCCtttttttttttttGAGTTTCTTCTGAATTATTCATC 227
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 197 TGGGTTCAGATTTGGAAAATTTCC-----TTTTTTTCGAGTTTCTTCTGAATTATTCATC 251
Query 228 GTGGAGATTCTCGGATCGGGAAGGGCTGCGAGAGGTGGTTTTCACGGCGGGGATAGATTC 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 GTGGAGATTCTCGGATCGGGAAGGGCTGCGAGAGGTGGTTTTCACGGCGGGGATAGATTC 311
Query 288 ATCTTCTGCCTTCTCCTGAGGGGGTAGCCGAGGCTCCGGCCTCGGCGGTTTTTAAACCCC 347
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 ATCTTCTGTCTTCTCCTGAGGGGGTAGCCGAGGCTCCGGCCTCGGCGGTTTTTAAACCCC 371
Query 348 TACCTTCACAAATTCTGGGAAATTATTAGaaaaaaaaaaaaaaaGCTTCGATTTTTCAGT 407
|||||| |||||||||||| || ||||| |||||||||| || |||||||||||
Sbjct 372 TACCTTTACAAATTCTGGG-AA--ATTAG------AAAAAAAAAGGTTTGATTTTTCAGT 422
Query 408 TTCTGCTCTGTTTTCGTCTCTCGAAAGttttttttttCTTCACAAAATCGAGAATTTCTT 467
|| ||||||| ||| |||||||||||||||| |||| | |||||||||||
Sbjct 423 TTTTGCTCTG--TTCTTCTCTCGAAAGTTTTTGTTTT-GT-------TCGAGAATTTC-- 470
Query 468 TGGAAAGTGAGATTGTTGATCGTTTGCTGATAAGAGGGTGAAGA-AAAGATGCCTGCTTT 526
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 471 TGTAAAGTGAGATTGTTGATCGTTTGCTGATAAGAGGGTGAAGATAAAGATGCCTGCTTT 530
Query 527 AGCTTGCGTTGATACGTCCTTTGT---TCCT-CCT--G---GCT-----A-CGCCGGTGA 571
|||||||||||||||||||||||| |||| ||| | || | |||||||||
Sbjct 531 AGCTTGCGTTGATACGTCCTTTGTACCTCCTGCCTACGCCTTCTCCGACACCGCCGGTGA 590
Query 572 TGTCTTTATCCCGGCG---TCACCAACTTCCGCCGCCGCCGTTGTGGACAGCTCTTG-CC 627
||| |||||||||||| |||||||||| ||||||||||||| | ||| ||
Sbjct 591 TGTTTTTATCCCGGCGTCATCACCAACTT---CCGCCGCCGTTGT-------TGTTGACC 640
Query 628 GTTGGTCTACC-TCTCTCTCATCGTCTCTCTATCGAATCGATGGATGGGGAGCTCCTTAT 686
|||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 641 GTTGGTCT-CCGTCGCTCTCATCGTCTCTCTATCGAATCGATGGATGGGGAGCCCCTTAT 699
Query 687 TTCATAGCCAATTCATCTGGTAACATCTCTGTTCGTCCTCATGGCTCTGAAACTTTACCT 746
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 700 TTCATAGCCAATTCGTCTGGTAACATCTCTGTTCGTCCTCATGGCTCTGAAACTTTGCCT 759
Query 747 CACCAAGACATCGATTTGCTCAAAATCGTTAAGAAGGTGACGGATCCGAAATCCTCCGGT 806
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 760 CACCAAGACATCGATTTGCTCAAAATCGTTAAGAAGGTGACGGGTCCGAAATCTTCCGGT 819
Query 807 GGTTTGGGATTGCAGCTCCCGTTAATCGTTCGTTTCCCTGATGTATTGAAGAACCGTCTC 866
||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 820 GGTTTAGGATTGCAGCTTCCGTTGATCGTTCGTTTCCCTGATGTGTTGAAGAACCGTCTC 879
Query 867 GAGTGTCTTCAATCTGCGTTTGATTTCGCCATCAAGAGTCAAGGATATGATTCTCATTAC 926
||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||
Sbjct 880 GAGTGTCTTCAATCTGCGTTTGATTACGCGATTAAAAGTCAAGGATATGATTCTCATTAC 939
Query 927 CAAGGTGTTTATCCTGTGAAATGTAATCAAGATCGATTCGTTGTTGAAGATATTGTCAAG 986
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 940 CAAGGTGTTTATCCGGTGAAATGTAACCAAGATCGATTCGTTGTTGAAGATATTGTCAAG 999
Query 987 TTTGGATCTTCGTTTCGGTTTGGATTAGAAGCTGGTTCCAAACCTGAGATCCTTCTCGCT 1046
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1000 TTTGGATCTTCGTTTCGATTTGGATTAGAAGCTGGTTCTAAACCTGAGATCCTTCTTGCT 1059
Query 1047 ATGAGCTGCTTGTGTAAAGGTAATCCTGATGCCTTTCTTGTGTGTAATGGATTCAAAGAC 1106
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1060 ATGAGCTGCTTGTGTAAAGGTAGCCCTGATGCCTTTCTTGTGTGCAATGGATTCAAAGAT 1119
Query 1107 GCTGAGTATATATCCTTGGCTCTGCTTGGGAGAAAACTGGCGTTGAATACTGTGATTGTG 1166
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 GCTGAGTATATATCATTGGCTCTGCTTGGGAGAAAACTGGCGTTGAATACTGTGATTGTG 1179
Query 1167 CTTGAGCAAGAAGAAGAGCTTGATTTGGTTATTGATTTGAGCCAGAAGATGAATGTGAGG 1226
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 1180 CTTGAGCAAGAAGAAGAGCTTGATCTGGTTATTGAGCTGAGCCAGAAGATGAATGTGAGG 1239
Query 1227 CCTGTCATTGGGTTAAGGGCTAAGCTGAGGACTAAGCATTCGGGTCATTTCGGATCAACT 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 CCTGTCATTGGGTTAAGGGCTAAGCTGAGGACTAAGCATTCGGGTCATTTCGGATCAACT 1299
Query 1287 TCTGGTGAAAAGGGCAAATTTGGATTGACTACTACTCAGATTGTTCGTGTGTTGAGGAAG 1346
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1300 TCTGGTGAAAAGGGTAAATTTGGATTGACTACTACTCAGATTGTTCGTGTGGTGAGGAAG 1359
Query 1347 CTGAGCCAATCTGGTATGCTTGATTGTCTCCAGCTTTTGCATTTTCATATTGGGTCACAG 1406
||| | |||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 1360 CTGCGTCAATCTGGTATGCTTGATTGTCTCCAGCTTCTGCATTTTCATATTGGTTCACAG 1419
Query 1407 ATTCCGTCGACTTCGTTGCTCTCTGATGGTGTCGCCGAGGCTGCTCAGCTTTACTGTGAA 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 ATTCCGTCGACTTCGTTGCTCTCTGATGGTGTCGCCGAGGCTGCTCAGCTTTACTGTGAA 1479
Query 1467 CTTGTGCGTCTTGGTGCACATATGAAAGTTATTGATATTGGTGGTGGTTTGGGGATTGAC 1526
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1480 CTTGTGCGTCTTGGTGCACATATGAAAGTTATTGATATCGGTGGTGGTTTGGGGATTGAC 1539
Query 1527 TACGATGGGTCTAAGTCTGGAGAATCGGATCTCTCTGTTGCTTATAGCCTCGAGGAGTAT 1586
||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1540 TACGACGGGTCTAAATCTGGAGAATCGGATCTCTCTGTTGCTTATAGTCTCGAGGAGTAT 1599
Query 1587 GCTGAAGCTGTTGTAGCTTCTGTTCGGTTTGTTTGTGACAGGAGGTCAGTGAAACATCCG 1646
||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||
Sbjct 1600 GCTGAAGCTGTTGTAGCTTCTGTTCGGGTTGTGTGTGACCGGAGCTCAGTGAAACATCCG 1659
Query 1647 GTGATATGCAGCGAAAGCGGTAGAGCGATAGTCTCTCATCATTCTGTGTTGATCTTTGAA 1706
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1660 GTGATATGCAGCGAAAGCGGTAGAGCGATAGTCTCTCATCATTCTGTGCTGATCTTTGAA 1719
Query 1707 GCTGTTTCAGCGGTTAAACCAATGGTGCATCAAGCGACTCCTGAG-GATATTCAGTTCCT 1765
||||||||||| | |||||||||||| |||||||| ||||| | | ||||||||||||||
Sbjct 1720 GCTGTTTCAGCAGATAAACCAATGGTTCATCAAGCAACTCCCG-GCGATATTCAGTTCCT 1778
Query 1766 GCTCGAAGGTAATGAGGAAGCTCGAGCCAATTATGAGGATCTTTACGCTGCTGTGATGCG 1825
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1779 GCTTGAAGGTAATGAGGAAGCTCGAGCCAATTATGAGGATCTTTATGCTGCTGTGATGCG 1838
Query 1826 TGGAGACCACGAGAGCTGCCTCCTTTATGTCGATCAGCTGAAGCAGAGGTGTGTTGAAGG 1885
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1839 TGGAGACCACGAAAGCTGCCTTCTTTATGTCGATCAGCTGAAGCAGAGGTGTGTTGAAGG 1898
Query 1886 TTTCAAAGAAGGTGTTTTGAGCATCGAGCAATTAGCTTCTGTTGATGGGTTATGCGAGTG 1945
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1899 TTTCAAAGAAGGTGTTTTGAGCATCGAGCAGTTAGCTTCTGTTGATGGTTTATGCGAGTG 1958
Query 1946 GGTGTTGAAGGCTATAGGTGCATCGGATCCGGTTCACACTTACAATATCAATCTATCGGT 2005
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1959 GGTGTTGAAGGCTATAGGCGCATCGGATCCGGTTCATACTTACAATATCAATCTATCAGT 2018
Query 2006 TTTCACTTCGATTCCTGATCTCTGGGGGATTGATCAGCTGTTTCCTATAGTTCCTATCCA 2065
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2019 TTTCACTTCGATTCCTGATCTCTGGGGGATTGATCAGCTGTTCCCTATAGTTCCTATCCA 2078
Query 2066 TAAGCTCGATCAAAGGCCCGGGGCTCGTGGAATC-TTATCGGATTTAACATGCGACAGCG 2124
||||||||||||||||||||||||||| |||||| || || |||||||| || || || |
Sbjct 2079 TAAGCTCGATCAAAGGCCCGGGGCTCGCGGAATCCTT-TCAGATTTAACGTGTGATAGTG 2137
Query 2125 ATGGGAAGATCAACAAGTTCATAGGCGGCGAATCCAGCTTGCCGTTGCATGAGCTGGACA 2184
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 2138 ACGGGAAGATCAACAAGTTCATAGGCGGTGAATCCAGCTTGCCGTTGCACGAGCTGGACA 2197
Query 2185 ACAATGGCGGTGGAGG--G-TACTTTCTGGGTATGTTCCTTGGAGGGGCTTACGAGGAGG 2241
| |||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct 2198 AGAATGGCAGTGGAGGAAGGTACTTTTTGGGTATGTTCCTTGGAGGGGCTTACGAGGAGG 2257
Query 2242 CTCTCGGTGGAGTCCACAATCTGTTTGGTGGGCCAAGCGTTGTCCGGGTCTCGCAGAGCG 2301
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 2258 CTCTCGGTGGAGTCCACAATCTGTTTGGTGGACCAAGCGTTGTCCGGGTCTCCCAGAGCG 2317
Query 2302 ATGGACCACACAGCTTTGCAGTGACGCGAGCCGTGCCTGGTCAGTCCTCAGCTGATGTTC 2361
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 2318 ATGGACCACACAGCTTTGCAGTGACCCGAGCGGTGCCTGGTCAGTCCTCAGCGGATGTTC 2377
Query 2362 TCCGAGCAATGCAGCATGAGCCTGAGCTAATGTTTCAGACCCTAAAGCACCGAGCAGAGG 2421
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2378 TCCGAGCAATGCAGCATGAGCCGGAGCTAATGTTTCAGACCCTAAAGCACCGAGCAGAGG 2437
Query 2422 AAATGATGCATACCAAAGGCGGTAGCGAAGGTGAAAATGAAGAGGAAGAAGAAGATGTTG 2481
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2438 AAATGATGCATACCAAAGGTGGTAGCGAAGGTGAAAATGAAGAGGAAGAAGAAGATGATG 2497
Query 2482 AGTTCAACAATGTCGCGGCTTGTCTCGACCGTTCGTTCCACAACATGCCGTATCTTGCGA 2541
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 2498 AGTTCAACAATGTGGCGGCTTCTCTCGACCGTTCGTTCCACAACATGCCGTATCTTGCAA 2557
Query 2542 CTGAGCAGGCATCGCCAAGTAACTCTCTTTCAGCTGCGATCAGTAACCTCGGGTTTTACT 2601
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2558 CTGAGCAGGCATCGCCAAGTAACTCTCTTTCAGCTGCGATCAGTAACCTTGGGTTTTACT 2617
Query 2602 ACTGCGACGAAGACGGCTACGATTACCTCTCTGGGTGA 2639
||||||||||||||| |||||||||| |||||| ||||
Sbjct 2618 ACTGCGACGAAGACGTCTACGATTACATCTCTGCGTGA 2655
> AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine decarboxylase
1 | chr2:7150622-7153339 REVERSE LENGTH=2718
Length=2718
Score = 1738 bits (941), Expect = 0.0
Identities = 1556/1847 (84%), Gaps = 65/1847 (4%)
Strand=Plus/Plus
Query 604 CCGCCGTTGTGGACAGCTCTTGCCGTTGGTCTACC-TCTCTCTCATCGTCTCTCTATCGA 662
|||||||||| ||| | || |||| ||||||| || || ||||| || ||||| || ||
Sbjct 509 CCGCCGTTGTTGACGGTTCCTGCCATTGGTCT-CCGTCCCTCTCCTCCTCTCTTTACCGT 567
Query 663 ATCGATGGATGGGGAGCTCCTTATTTCATAGCCAATTCATCTGGTAACATCTCTGTTCGT 722
||||| |||||||||||||| |||||| ||| ||||| || || |||||||||||||||
Sbjct 568 ATCGACGGATGGGGAGCTCCGTATTTCGCAGCGAATTCCTCCGGGAACATCTCTGTTCGT 627
Query 723 CCTCATGGCTCTGAA-ACTTTACCTCACCAAGACATCGATTTGCTCAAAATCGTTAAGAA 781
||||||||||| || |||||||||||||||||||||||| || | ||| | || |||||
Sbjct 628 CCTCATGGCTC-AAACACTTTACCTCACCAAGACATCGATCTGATGAAAGTTGTGAAGAA 686
Query 782 GGTGACGGATCCGAAATCCTCCGGTGGTTTGGGATTGCAGCTCCCG-TTAATCGTTCGTT 840
|| || |||||| | ||||||| ||||| ||||| ||| || || |||||||
Sbjct 687 AGTTACAGATCCG--A-------GTGGTTTAGGATTACAGCTTCCGCTT-ATTGTTCGTT 736
Query 841 TCCCTGATGTAT-TGAAGAACCGTCTCGAGTGTCTTCAATCTGCGTTTGATTTCGCCA-T 898
|||||||||| | ||||||| ||||| |||||||||||||| |||||||||| ||| | |
Sbjct 737 TCCCTGATGT-TCTGAAGAATCGTCTTGAGTGTCTTCAATCCGCGTTTGATTACGCGATT 795
Query 899 CAAGAGTCAAGGATATGATTCTCATTACCAAGGTGTTTATCCTGTGAAATGTAATCAAGA 958
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 796 C-AGAGTCAAGGATATGATTCTCATTACCAAGGTGTGTATCCTGTGAAATGTAATCAAGA 854
Query 959 TCGATTCGTTGTTGAAGATATTGTC-AAGTTTGGATCTTC-G-TTTCGGTTTGGATTAGA 1015
||| || | | |||||||||||| || || ||||| | | ||||| || || |||||
Sbjct 855 TCGGTTTATCATCGAAGATATTGTCGAA-TTCGGATC--CGGTTTTCGATTCGGTTTAGA 911
Query 1016 AGCTGGTTCCAAACCTGAGATCCTTCTCGCTATGAGCTGCTTGTGTAAAGGTAATCCTGA 1075
|||||||||||| |||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct 912 AGCTGGTTCCAAGCCTGAGATTCTTCTTGCTATGAGTTGTTTGTGTAAAGGTAATCCTGA 971
Query 1076 TGCCTTTCTTGTGTGTAATGGATTCAAAGACGCTGAGTATATATCCTTGGCTCTGCTTGG 1135
|| ||||||||||||||||| || |||||| |||||||||| || |||||| || ||||
Sbjct 972 AGCTTTTCTTGTGTGTAATGGTTTTAAAGACTCTGAGTATATCTCATTGGCTTTGTTTGG 1031
Query 1136 GAGAAAACTGGCGTTGAATACTGTGATTGTGCTTGAGCAAGAAGAAGAGCTTGATTTGGT 1195
||| ||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1032 GAGGAAACTTGAATTGAATACTGTTATTGTTCTTGAGCAAGAAGAAGAGCTTGATTTGGT 1091
Query 1196 TATTGATTTGAGCCAGAAGATGAATGTGAGGCCTGTCATTGGGTTAAGGGCTAAGCTGAG 1255
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct 1092 TATTGATTTGAGCCAGAAGATGAATGTTAGGCCTGTTATTGGGTTAAGAGCTAAGCTTAG 1151
Query 1256 GACTAAGCATTCGGGTCATTTCGGATCAACTTCTGGTGAAAAGGGCAAATTTGGATTGAC 1315
||||| ||||| |||||||| || || ||||||||||| ||||| || ||||| |||||
Sbjct 1152 AACTAAACATTCTGGTCATTTTGGTTCTACTTCTGGTGAGAAGGGGAAGTTTGGTTTGAC 1211
Query 1316 TACTACTCAGATTGTTCGTGTGTTGAGGAAGCTGAGCCAA-TCTGGTATGCTTGATTGTC 1374
||| ||||||| |||||||| ||||||||||||| ||| | |||||||||||||||||
Sbjct 1212 TACGGTTCAGATTCTTCGTGTGGTGAGGAAGCTGAGTCAAGT-TGGTATGCTTGATTGTC 1270
Query 1375 TCCAGCTTTTGCATTTTCATATTGGGTCACAGATTCCGTCGACTTCGTTGCTCTCTGATG 1434
|||||||| |||||||||| ||||| |||||||||||||| || | ||||| || || |
Sbjct 1271 TCCAGCTTCTGCATTTTCACATTGGTTCACAGATTCCGTCCACGGCTTTGCTTTCCGACG 1330
Query 1435 GTGTCGCCGAGGCTGCTCAGCTTTACTGTGAACTTGTGCGTCTTGGTGCACATATGAAAG 1494
|||| || |||||||| |||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct 1331 GTGTGGCTGAGGCTGCGCAGCTTTACTGTGAGCTTGTCCGTCTTGGTGCTCATATGAAGG 1390
Query 1495 TTATTGATATTGGTGGTGGTTTGGGGATTGACTACGATGGGTCTAAGTCTGGAGAATCGG 1554
| ||||||||||||||||| ||||||||||| ||||| |||||||| || || || ||||
Sbjct 1391 TGATTGATATTGGTGGTGGGTTGGGGATTGATTACGACGGGTCTAAATCGGGGGAGTCGG 1450
Query 1555 ATCTCTCTGTTGCTTATAGCCTCGAGGAGTATGCTGAAGCTGTTGTAGCTTCTGTTCGGT 1614
||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||| |||
Sbjct 1451 ATCTCTCTGTTGCTTATAGTCTCGAGGAGTATGCTGCAGCTGTTGTGGCTTCGGTTAGGT 1510
Query 1615 TTGTTTGTGA-CAGGAGGTCAGTGAAACATCCGGTGATATGCAGCGAAAGCGGTAGAGCG 1673
|||||||||| ||| || || ||||| ||||||||||| |||||||| |||||| ||||
Sbjct 1511 TTGTTTGTGATCAGAAG-TCTGTGAAGCATCCGGTGATTTGCAGCGAGAGCGGTCGAGCC 1569
Query 1674 ATAGTCTCTCATCATTCTGTGTTGATCTTTGAAGCTGTTTCAGC-GGTTAAACCAATGGT 1732
|| || |||||||| || |||||||||||||||||||| ||||| ||| || | ||
Sbjct 1570 ATTGTGTCTCATCACTCGGTGTTGATCTTTGAAGCTGTCTCAGCTGGTCAA-C-AA---- 1623
Query 1733 GCATCAAGCGACTCCTGAG-GAT-ATTCAGTTCCTGCTCGAAGG-TAAT--GAGGAAGCT 1787
||| | | || ||| | ||| || ||||| |||| ||||| || | ||||||| |
Sbjct 1624 -CATGA-G--ACCCCT-ACTGATCAT-CAGTTTATGCTTGAAGGGTACTCTGAGGAAGTT 1677
Query 1788 CGAGCCAATTATGAGGATCTTTACGCTGCTG-TGATGCGTGGAGACCACGAGAGCTGCCT 1846
|||| |||| ||| ||||||| | ||||| | |||||||| || | || |||||| |
Sbjct 1678 CGAGGTGATTACGAGAATCTTTATGGTGCTGCT-ATGCGTGGTGATCGTGAAAGCTGCTT 1736
Query 1847 CCTTTATGTCGATCAGCTGAAGCAGAGGTGTGTTGAAGGTTTCAAAGAAGGTGTT-TTGA 1905
|||||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||
Sbjct 1737 GCTTTATGTTGATCAGCTGAAGCAGAGATGTGTTGAAGGGTTCAAAGAAGGT-TCCTTGG 1795
Query 1906 GCATCGAGCAATTAGCTTCTGTTGATGGGTTATGCGAGTGGGTG-TTGAAGGCTATAGGT 1964
|||| || || |||||| ||||||||| ||||||||||||||| || ||||| || |||
Sbjct 1796 GCATTGAACAGTTAGCTGGTGTTGATGGATTATGCGAGTGGGTGATT-AAGGCGATTGGT 1854
Query 1965 GCATCGGATCCGGTTCACACTTACAATATCAATCTATCGGTTTTCACTTCGATTCCTGAT 2024
|||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||
Sbjct 1855 GCATCGGATCCGGTTCTTACTTACCATGTCAATCTATCGGTTTTCACTTCGATTCCTGAT 1914
Query 2025 CTCTGGGGGATTGATCAGCTGTTTCCTATAGTTCCTATCCATAAGCTCGATCAAAGGCCC 2084
|||||||||||||||||||||||||||| ||||| |||||||| || || ||||||||
Sbjct 1915 TTCTGGGGGATTGATCAGCTGTTTCCTATTGTTCCAATCCATAAACTTGACCAAAGGCCT 1974
Query 2085 GGGGCTCGTGGAATCTTATCGGATTTAACATGCGACAGCGATGGGAAGATCAACAAGTTC 2144
| || | || |||||||||||||| || || |||||||| || |||||||||||||||
Sbjct 1975 GCCGCGAGAGGGATCTTATCGGATTTGACGTGTGACAGCGACGGAAAGATCAACAAGTTC 2034
Query 2145 ATAGGCGGCGAATCCAGCTTGCCGTTGCATGAGCTGGACAACAATGGC-G--GTGGAGGG 2201
|||||||| ||||| |||||||| ||||| ||| |||||||||||||| | | || |||
Sbjct 2035 ATAGGCGGAGAATCGAGCTTGCCATTGCACGAGATGGACAACAATGGCTGCAGCGGTGGG 2094
Query 2202 ---TACT-TTCTGGGTATGTTCCTTGGAGGGGCTTACGAGGAGGCTCTCGGTGGAGTCCA 2257
|||| || |||| |||||||| || || ||||| ||||| |||||||||||||||||
Sbjct 2095 CGGTACTATT-TGGGAATGTTCCTAGGTGGAGCTTATGAGGAAGCTCTCGGTGGAGTCCA 2153
Query 2258 CAATCTGTTTGGTGGGCCAAGCGTTGTCCGGGTCTCGCAGAGCGATGGACCACACAGCTT 2317
||||||||| ||||| |||||||| || || || | ||||||||||||||| ||| | ||
Sbjct 2154 CAATCTGTTCGGTGGACCAAGCGTGGTTCGCGTATTGCAGAGCGATGGACCTCACGGATT 2213
Query 2318 TGCAGTGACGCGAGCCGTGCCTGGTC-AGTCCTCAGCTGATGTTCTCCGAGCAATGCAGC 2376
|||||||| || || ||| ||| | | ||||| || ||||| ||| ||||||||||||
Sbjct 2214 CGCAGTGACCCGTGCTGTGA-TGGGCCAATCCTCTGCAGATGTCCTCAGAGCAATGCAGC 2272
Query 2377 ATGAGCCTGAGCTAATGTTTCAGACCCT-AAAGCACCGAGCAGAGGA 2422
||||||||||||| ||||||||||| || ||| |||||||| |||||
Sbjct 2273 ATGAGCCTGAGCTCATGTTTCAGACTCTTAAA-CACCGAGCCGAGGA 2318
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131036055116
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5