BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491201 Length=987 Score E Sequences producing significant alignments: (Bits) Value AT4G34560.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1315 0.0 > AT4G34560.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:16507635-16508754 FORWARD LENGTH=1120 Length=1120 Score = 1315 bits (712), Expect = 0.0 Identities = 906/996 (91%), Gaps = 28/996 (3%) Strand=Plus/Plus Query 1 ACAAACTGGTCCATGTTCACCATGACTATTGTTCTTCTTCCTCTGTTTAATCTCTTTATG 60 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct 93 ACAAACTGGTCCTTGTTCACCATGACTATTGTTCTTCTTCCTTTGTTTAATCTCCTGATG 152 Query 61 GCAAAACTCTCTGCTTCTTCTCACTTCGTTTCCCTAAATATCACTTCTTTCGAGTGACCT 120 |||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| Sbjct 153 ACAAAACTCTCTG---CTACTCACTTTGTTTCCGTAAATATCACTTCTTTCGAGTGACCT 209 Query 121 AAATCACTCCCACGATCCCTT---TAAG-TCCTTTTTCTTG-TTTTGTCCTGTGtttttt 175 |||||||| |||||||| ||| ||| ||| |||||||| |||| | ||||| ||| Sbjct 210 AAATCACTTCCACGATCTCTTAAAAAAGCTCC-TTTTCTTGCTTTT-TTCTGTG---TTT 264 Query 176 ttctttttGCAAGAAATCATCTTGATGGATCCAATTAAGTTCCAACACTTAAAGATGGAG 235 ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 265 TTCTTTTTGCAAGAATTCATCTTGATGGATCCAATTAAGTTTCAACACTTGAAGATGGAG 324 Query 236 AAATCCAGAGGAATCTTGAATTTCCAAGTAATAAGATCGTTCACGAGCTTGTTCAGACTG 295 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 325 AAATCCAGAGGAATCTTGAATTTCCAAGCAATAAGATCGTTCACGAGCTTGTTCAGACTG 384 Query 296 ATCGAGCTGCTTTTTCTTCTAATCTTGATTTCCAAACTCTCTTTCCCCTCTGTGAAACTC 355 ||||||| ||| ||||| |||||||||| ||||||||||||||||| ||||| ||| || Sbjct 385 TTCGAGCTTCTTCTTCTTGTAATCTTGATCTCCAAACTCTCTTTCCCTTCTGTAAAAATC 444 Query 356 TCCGGGGACATTTTCAGGGAAGCAGCAGTGTTTCTCGTTAGCCCGAGATTCGTTTTCTTC 415 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 445 TCTGGGGACATTTTCAAGGAAGCAGCAGTGTTTCTCGTTAGCCCGAGATTCGTTTTCTTC 504 Query 416 GTCGGAAACGCAATTGTAATTACTCTTTTTGCGAAATCCGGACGATACAGCTCGAGTCAG 475 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 505 ATCGGAAACGCAATTGTAATTACTCTTCTTGCGAAATCCGGACGATACAGCTCGAGTCAC 564 Query 476 GAGCCTTTAAAGACAACAACAGAAGCTGAAAGTAACGATCTTTACCAAGATTTTCTTCAT 535 ||||||| ||||||| |||||||||||| ||| ||||||||||||||||| |||||||| Sbjct 565 GAGCCTTCAAAGACAGCAACAGAAGCTGCAAGCAACGATCTTTACCAAGAATTTCTTCAC 624 Query 536 AAGAGTGAGAAGAAAAAATCTGTAGTTTACGAGACGAAAACAGAACAACTGAAGAAGCCG 595 |||||||||||||| ||| | |||||||||| ||||||||||||||||| ||||||||| Sbjct 625 AAGAGTGAGAAGAAGAAACCCGTAGTTTACGCTACGAAAACAGAACAACTAAAGAAGCCG 684 Query 596 AGTGGAGTGATCAAGAGGGTTAGTTTCGGGAGAAGCCAATCGCAGAAAGCGCTTGAGGCG 655 ||||||| || | |||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 685 AGTGGAGGGA--A-GAGGGTTAGTTTCGGGAGAAGCCAATCGCACAAAGCGTTTGAGGCG 741 Query 656 GTTCAGCCGCTAGAGAGTACCAATGGTGAGAAAACCATAAAGAGGTATGTGTCGGAGAAG 715 ||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 742 GTTAAGCCGCTGGAGAGTACCAATGGTGAGAAAAACATGAAGAGGTATGTGTCGGAGAAG 801 Query 716 CATATGAGGATTTGTGACTCCGACAAGAAAGTAGTGGTGAGGGTTAAGAAACCAGAAGAT 775 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 802 CATATGAGGGTTTGTGACTCCGACAAGAAAGTAGTGGTGAGAGTTAAGAAACCAGAAGAT 861 Query 776 GGAATGAGTAACGAGCAATTTAGGACAAAGATTGAAGCTTTCATTGCGAGACAAAAGAGG 835 |||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 862 GGAATGAGCAACGAGCAATTTAGGACAAAGATTGAAGCTTTCATCGCTAGACAAAAGAGA 921 Query 836 ATTCAAAAGAATGAAGAACATTTAATAATCTAG--A--TCCTCTTTGCTAGTGAATGTTT 891 ||||||||| |||||||||| || ||||||||| | |||||||||||||||||||||| Sbjct 922 ATTCAAAAGGATGAAGAACACTTGATAATCTAGCTAGATCCTCTTTGCTAGTGAATGTTT 981 Query 892 GTTTCTGTTTCttttttttttcctttttGTTATTATAAACTTGAATCCTCTGTTTCATAA 951 ||| | ||| ||||||||| |||| | ||||| | || ||||||||||||||| | ||| Sbjct 982 -TTT-T-TTT-TTTTTTTTT-CCTTCTGGTTAT-A-AA-CTTGAATCCTCTGTTACGTAA 1033 Query 952 TCTTGTAACTTTGCCTTAGAAAATCTCTTTATCTTT 987 |||||||||||||||||||||| ||||||||||||| Sbjct 1034 TCTTGTAACTTTGCCTTAGAAATTCTCTTTATCTTT 1069 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48325249414 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5