BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491272 Length=1894 Score E Sequences producing significant alignments: (Bits) Value AT4G34000.1 | Symbols: ABF3, DPBF5 | abscisic acid responsive e... 2529 0.0 > AT4G34000.1 | Symbols: ABF3, DPBF5 | abscisic acid responsive elements-binding factor 3 | chr4:16295558-16298255 FORWARD LENGTH=1985 Length=1985 Score = 2529 bits (1369), Expect = 0.0 Identities = 1710/1863 (92%), Gaps = 70/1863 (4%) Strand=Plus/Plus Query 82 ttttggagatttgttttttGATT-AAAGGAGATTCCTTTCCATTTTCACTATTATTTGCT 140 |||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct 118 TTTTGGAGATTTGTTTACTGATTAAAAGGAGATTCCTTTCCATTTTCAC---CATTTGCT 174 Query 141 CTGTTTTAGTACTTCATTGTGCATATATATCTC-TTTCAGATCTTTTGTTGGGGTTTAGC 199 ||| ||| | |||||||||||| | ||||| || ||| |||||||||||| ||||||||| Sbjct 175 CTG-TTT-G-ACTTCATTGTGC-T-TATATTTCATTT-AGATCTTTTGTTTGGGTTTAGC 228 Query 200 TTTGGAACTGATAAAAATCTGATTTTGGGTCTC--TTTTGAGTTTTGGTTTTCTAAATTT 257 ||||||||||||||||||||||||||| || | |||| | ||||||| | ||||||| Sbjct 229 TTTGGAACTGATAAAAATCTGATTTTGTCTCACGGCTTTG-GATTTGGTTCT-TAAATTT 286 Query 258 TGGT-ACT-T-TA-AA-----A---TCC-------A-G-AAGCTT-AGTAATGGGGTCTA 295 |||| | | | | || | ||| | | |||||| |||||||||||||| Sbjct 287 TGGTAAATATCCAGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTA 346 Query 296 GATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGT--G-AGCAGCCAACGGTGGGGACTA 352 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 347 GATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTA 406 Query 353 GTCTTCCATTGACGAGACAGAACTCTGTGTTTTCGTTAACCTTTGATGAGTTTCAGAACT 412 ||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| Sbjct 407 GTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACT 466 Query 413 CATGGGGTGGTGGAATTGGCAAGGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGA 472 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 467 CATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGA 526 Query 473 ACATTTGGACTGCTGAGGAAAGCCACTCAATCATGGGAAACAACACTAGTTTCAACAACA 532 ||||||||||||| |||||||| || ||||| ||||||||||| || |||| || ||||| Sbjct 527 ACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAACAATACCAGTTACACCAACA 586 Query 533 TCAACAATGGTAATAGCGGAAACACTGTTATTAACGGCGGTGGTAACAACAATGGTGGGT 592 ||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 587 TCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGGT 646 Query 593 TAGCTGTTGGTGTGGGAGAAGAAACTGGTGGTTTTTTCACTGGTGGGAGTTTGCAGAGAC 652 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 647 TAGCTGTTGGTGTGGGAGGAGAAAGTGGTGGTTTTTTCACTGGTGGGAGTTTGCAGAGAC 706 Query 653 AAGGGTCGCTTACCTTGCCTCGTACCATTAGTCAGAAGAGGGTTGATGATGTCTGGAAGG 712 |||| || |||||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct 707 AAGGTTCACTTACCTTGCCTCGGACGATTAGTCAGAAAAGGGTTGATGATGTCTGGAAGG 766 Query 713 AGCTGATGAAGGAGGATGACATTGGAAATGGTGTTGGTAATGCTGGGACAGGCGGGATTC 772 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |||| Sbjct 767 AGCTGATGAAGGAGGATGACATTGGAAATGGTGTTGTTAATGGTGGGACAAGCGGAATTC 826 Query 773 CGCAGAGGCAACAAACGTTGGGAGAAATGACTTTGGAGGAGTTTTTGGTCAGGGCTGGTG 832 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 827 CGCAGAGGCAACAAACGCTGGGAGAGATGACTTTGGAGGAGTTTTTGGTCAGGGCTGGTG 886 Query 833 TGGTTAGGGAAGAACCTCAACCCGTGGAGAGTGTAACTAACTTCAATGGCGGATTCTATG 892 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 887 TGGTTAGGGAAGAACCTCAACCGGTGGAGAGTGTAACTAACTTCAATGGCGGATTCTATG 946 Query 893 GATTTGGCAGTAATGGAGGTCTTGGGACAGCTGGTAATGGGTTTGTTGCTAACCAGCCTC 952 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct 947 GATTTGGCAGTAATGGAGGTCTTGGGACAGCTAGTAATGGGTTTGTTGCAAACCAACCTC 1006 Query 953 ATGATTTGTCTGGAAATGGA-TCAGTGGTGAGACCA-GATCTGCTGACAGCTCAAACTCA 1010 | |||||||| ||||||||| | || ||||||| || ||||||||||| ||||||||||| Sbjct 1007 AAGATTTGTCAGGAAATGGAGT-AGCGGTGAGA-CAGGATCTGCTGACTGCTCAAACTCA 1064 Query 1011 GCCACTACAGATGCAGCAG---C--------CA-CAG--AC----GGTGCAGCAGCCGCA 1052 ||||||||||||||||||| | || ||| || ||||||||||||||| Sbjct 1065 GCCACTACAGATGCAGCAGCCACAGATGGTGCAGCAGCCACAGATGGTGCAGCAGCCGCA 1124 Query 1053 ACAGCTGATACAGAAGCAGGAGAGACCTTTTCCCAAACAGACCACTATCGCGTTTTCCAA 1112 ||| |||||||||| ||||||||| ||||||||||||||||||||||| || |||||||| Sbjct 1125 ACAACTGATACAGACGCAGGAGAGGCCTTTTCCCAAACAGACCACTATAGCATTTTCCAA 1184 Query 1113 CACTGCTGATGTAGTTAACCGTTCTCAACCTGCAACACAGTGCCAGGAAGTGAAGCCTTC 1172 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1185 CACTGTTGATGTGGTTAACCGTTCTCAACCTGCAACACAGTGCCAGGAAGTGAAGCCTTC 1244 Query 1173 AATACTTGGAATTCGTAACCATCTTGTGAACAACAATCTACTGCAAGCTGTCGATTTTAA 1232 |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| Sbjct 1245 AATACTTGGAATTCATAACCATCCTATGAACAACAATCTACTGCAAGCTGTCGATTTTAA 1304 Query 1233 AACAGGGGTAACGGTTGCAGCAGTATCTCCTGGAAGCCAGATGTCACCTGATCTGACTCC 1292 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 AACAGGAGTAACGGTTGCAGCAGTATCTCCTGGAAGCCAGATGTCACCTGATCTGACTCC 1364 Query 1293 AAAGAGCGCCCTGGATGCATCTTTGTCTCCTGTTCCTTACATGTTTGGGCGAGTGAGAAA 1352 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1365 AAAGAGCGCCCTGGATGCATCTTTGTCCCCTGTTCCTTACATGTTTGGGCGAGTGAGAAA 1424 Query 1353 AACAGGTGCAGTTCTGGAGAAAGTGATTGAGAGAAGGCAAAAAAGGATGATAAAGAATAG 1412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1425 AACAGGTGCAGTTCTGGAGAAAGTGATTGAGAGAAGGCAAAAAAGGATGATAAAGAATAG 1484 Query 1413 GGAATCAGCTGCAAGATCCCGCGCTCGCAAGCAAGCTTATACGATGGAACTGGAAGCAGA 1472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1485 GGAATCAGCTGCAAGATCCCGCGCTCGCAAGCAAGCTTATACGATGGAACTGGAAGCAGA 1544 Query 1473 AATTGCGCAACTCAAAGAGTTAAATGAAGAGTTGCAGAGGAAACAAGTTGAAATCATGGA 1532 |||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||| Sbjct 1545 AATTGCGCAACTCAAAGAATTGAATGAAGAGTTGCAGAAGAAACAAGTTGAAATCATGGA 1604 Query 1533 AAAGCAGAAAAACCAGCTCCTGGAGCCACTGCGCCAGCCATGGGGAATGGGATGCAAAAG 1592 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1605 AAAGCAGAAAAATCAGCTTCTGGAGCCTCTGCGCCAGCCATGGGGAATGGGATGCAAAAG 1664 Query 1593 GCAATGCTTGCGAAGGACATTAACGGGTCCCTGGTAGAGCCTATACTGGCGTCCAAGGAA 1652 ||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||| Sbjct 1665 GCAATGCTTGCGAAGGACATTGACGGGTCCCTGGTAGAGCTTATAATGGCGTCTAAGGAA 1724 Query 1653 CTCAACAAAGAGCCTAAGTTATAGAACAACTCAGAAAATAGAAAGCTAGCTTGGTATGTA 1712 | |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||| Sbjct 1725 CCCAACAAAGCGCCGAAGTTATAGAACAACTCAGAAGATAGAAAGCTAGCTTTGTACGTA 1784 Query 1713 GTTTAGGCAGGTGTTTCTGTGGGTGATTGTAAATCGTGAAGTGTGGCGGATTTGACAGAG 1772 |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1785 GTTTAGGCAGGT-T--CTGTGGGTGATTGTAAATCTTGAAGTGTGGCGGATTTGACAGAG 1841 Query 1773 ATATATAAACAC-TCATCTGTTCTATTTTCCTGAAGCATCTTTTGGTTTTATCGTCCTGA 1831 ||| |||||||| | ||||||||||||||||| || |||||||||||||||| |||||| Sbjct 1842 ATAGATAAACACAT-ATCTGTTCTATTTTCCT-AA--ATCTTTTGGTTTTATCTTCCTGA 1897 Query 1832 TGTAATGGATCTTGATCATTTGTCTTGAACATCTTTGTGACTTAACCAGAGTGGATTTAT 1891 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1898 TGTAATGGATCTTTATCATTTGTCTTGAACATCTTTGTGACTTAACCAGAGTGAATTTAT 1957 Query 1892 CTT 1894 ||| Sbjct 1958 CTT 1960 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93774618060 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5