BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491288 Length=1051 Score E Sequences producing significant alignments: (Bits) Value AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PM... 1629 0.0 AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PM... 501 5e-141 > AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr4:16253815-16255612 REVERSE LENGTH=1056 Length=1056 Score = 1629 bits (882), Expect = 0.0 Identities = 1000/1057 (95%), Gaps = 7/1057 (1%) Strand=Plus/Plus Query 1 CTCGGAGCCATCACACGACAATGACCGGCGCATTGTTTAGAAACGCTGCCTCCGAAGCCG 60 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 1 CTCGGAGCCATCACACGACAATGACCGGCGCATTGTTTAGAAACGCTGCTTCCGACGCCG 60 Query 61 CTCGGATCTTCCGGTTAAAGCTAACTGCGACGGCGAATCCTTTCGGAAAGCTCGACCCTT 120 |||||||||| || ||| ||| | | ||| | |||||||||| |||||||||||||||| Sbjct 61 CTCGGATCTTTCGATTACAGCGAGCAACGATGACGAATCCTTTTGGAAAGCTCGACCCTT 120 Query 121 TACCGATAGGAGGAAACATCCGGCGATTGCAGTCGAGGCCTTTTTATCGTACGCCTCAGT 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 121 TACCGATAGGAGGAAACATCCAGCGATTGCAGTCGAGGCCTTTTTATCGTACGCCTCAGT 180 Query 181 TTCTCGGGAAAGCAAAGGAAACCGGAGTCTCTGGTTTCTGTAC-T-T-C-T-T-CGTCTT 234 |||||||||||||||||||||| || ||||||||||||||| | | | | | | |||||| Sbjct 181 TTCTCGGGAAAGCAAAGGAAACAGGTGTCTCTGGTTTCTGTTCGTCTTCGTCTTCGTCTT 240 Query 235 CTTCGACGGTCTCTACTGCAGGATTCATCAGTTGGTATTTGGGAATGGTGAAATCGCGGC 294 |||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||| Sbjct 241 CTTCGACGGTCTCTACAGCAGGATTCATCGGATGGTATTTGGGAATGGTGAAATCTCGGC 300 Query 295 CGGTTCTGACCAAATCCGTCACGTCCTCGCTTATTTACATAGCCGCCGACTTGTCTTCGC 354 ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 301 CGGTTCTTACCAAATCCGTCACGTCCTCGCTTATTTACATAGCAGCCGATTTGTCTTCGC 360 Query 355 AGACAATTCCACAAGCTTCAGTGGAGTCTTATGACTTGGTAAGAACAGCAAGGATGGCAG 414 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 361 AGACAATTCCACAAGCTTCAGTGGATTCTTATGACTTGGTAAGAACAGCAAGGATGGGAG 420 Query 415 GATATGGGTTATTAATCTTGGGTCCTACACTTCACTATTGGTTCAATCTCATGTCAAGAC 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 421 GATATGGGTTATTAATCTTGGGTCCTACACTTCACTATTGGTTCAATCTCATGTCAAGTC 480 Query 475 TCTTCCCAAAACGAGATTTGATCACAACGTTTAAGAAAATGGCCATGGGACAGACCGTCT 534 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 481 TCTTCCCAAAACGAGATTTGATCACAACGTTTAAGAAAATGGCCATGGGACAGACAGTCT 540 Query 535 ACGGGCCTGCCATGAATGTTGTTTTCTTCTCACTGAATGCAGCCTTACAGGGTGAAAACG 594 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 541 ATGGGCCTGCCATGAATGTTGTTTTCTTCTCACTGAATGCAGCCCTACAGGGTGAAAATG 600 Query 595 GTTCAGAGATAGTTGCTAGATTGAAAAGGGACCTACTTCCCACAATGCTAAATGGTGTCA 654 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 601 GTTCAGAGATAGTTGCTAGATTGAAAAGGGACCTACTTCCCACAATGCTTAATGGTGTCA 660 Query 655 TGTATTGGCCTTTGTGTGATTTTATTACATTCAAGTTCTTCCCAGTTCATTTACAGCCAC 714 |||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||| Sbjct 661 TGTATTGGCCTTTGTGTGATTTTATTACTTTCAAGTTCTGCCCTGTTTATTTACAGCCAC 720 Query 715 TTGTGAGCAACTCGTTTTCATATTTATGGACAATCTACATAACTTATATGGCAAGCCGTG 774 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 721 TTGTGAGCAACTCGTTTTCGTATCTATGGACAATCTACATAACTTATATGGCAAGCCGTG 780 Query 775 CGAAGCCAACAGCCATTGCAATTTGAAAAAGCTCTCTGGGAAACTCTCTCAGTTTAAAAA 834 ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 781 CGACGCCAACCGCCATTGAAATTTGAAAAAGCTCTCTGGGAAACTCTCTCAGTTTAGAAA 840 Query 835 TGAAGAAATGAAGCCaaaaaaaaCTTTTACTAAAAAGAAACAGAGCATTCTTCAACATTC 894 ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct 841 TGAAGAAATGAAGCCAAAAAACACTTTTACTAAAA-GAAACAGGGCATTCTTCAACATTC 899 Query 895 TTTGTTTCCTCTCTCCAGATTTTAGGAGGATATAATGTAAAGAGTTTTGGGAAAAACTGT 954 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 900 TTTGTTTCCTCTCTCCAGATTTTAGGAGGATATAATGTAAGGAGTTTTGGGGAAAACTGT 959 Query 955 GCATTTGGACATGTCTTACACTCTTAGATTTAATTGACTTCTATGTTTAGTATTACATAT 1014 ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| | Sbjct 960 GCATTTGGACATGTCTTACACTCTTAGATTTAATTCAATTCTATGTTTAGTATTCCATGT 1019 Query 1015 AATATTTGAGTAAAATGGTGGTTCTTTAGCTTCTATC 1051 ||||||||||||||||||||||||||||||||| ||| Sbjct 1020 AATATTTGAGTAAAATGGTGGTTCTTTAGCTTCGATC 1056 > AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr2:6387624-6389628 REVERSE LENGTH=1020 Length=1020 Score = 501 bits (271), Expect = 5e-141 Identities = 436/515 (85%), Gaps = 14/515 (3%) Strand=Plus/Plus Query 267 TGGTAT-TTGGGAATGGTGAAATCGCGGCCGGTTCTGACCAAATCCGTCACGTCCTCGCT 325 |||||| || || ||||| ||||| | || ||| |||||||| ||||| ||||| || Sbjct 291 TGGTATCTT-GGTATGGTTAAATCACACCCAGTTGTGACCAAAAGTGTCACTTCCTCTCT 349 Query 326 TATTTACATAGCCGCCGACTTGTCTTCGCAGACAATT-CCACAAGCTTCAGT-GGAGTCT 383 ||||||||| ||||||||||||||||| ||||| ||| | | || |||| | |||||| Sbjct 350 TATTTACATTGCCGCCGACTTGTCTTCTCAGACGATTGCGA-AAACTTC-TTCTGAGTCT 407 Query 384 TATGACTTGGTAAGAACAGCAAGGATGGCAGGATATGGGTTATTAATCTTGGGTCCTACA 443 ||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||| ||| Sbjct 408 TATGACTTGGTGAGAACAGCAAGGATGGGAGGATATGGTTTATTTGTCTTGGGTCCAACA 467 Query 444 CTTCACTATTGGTTCAATCTCATGTCAAGACTCTTCCCAAAACGAGATTTGATCACAACG 503 |||||||| ||||||||| |||||||||||||||| || |||| |||||||||||||||| Sbjct 468 CTTCACTACTGGTTCAATTTCATGTCAAGACTCTTTCCTAAACAAGATTTGATCACAACG 527 Query 504 TTTAAGAAAATGGCCATGGGACAGACCG-TCTACGGGCCTGCCATGAATGTTGTTTTCTT 562 |||||||||||||| ||||||||||| | ||||||||||| |||| |||| ||||||| Sbjct 528 TTTAAGAAAATGGCTATGGGACAGAC-GATCTACGGGCCTATTATGACTGTTATTTTCTT 586 Query 563 CTCACTGAATGCAGCCTTACA-GGGTGAAAACGGTTCAGAGATAGTTGCTAGATTGAAAA 621 |||| |||||||| || |||| ||| ||| |||||||| ||| |||| |||||||||| Sbjct 587 CTCATTGAATGCATCCCTACAAGGG-GAACGCGGTTCAGTTATACTTGCCAGATTGAAAA 645 Query 622 GGGACCTACTTCCCACAATGCTA-AATGGTGTCATGTATTGGCCTTTGTGTGATTTTATT 680 ||||| |||| ||| | | || || |||||||||||||||||| | ||||||||||| Sbjct 646 GGGACTTACTCCCCGCGCT-CTTTAACGGTGTCATGTATTGGCCTCTATGTGATTTTATC 704 Query 681 ACATTCA-AGTTCTTCCCAGTTCATTTACAGCCACTTGTGAGCAACTCGTTTTCATATTT 739 ||||||| | |||||||| |||||||||||||| ||||| |||||||| ||||| ||| | Sbjct 705 ACATTCAGA-TTCTTCCCTGTTCATTTACAGCCTCTTGTAAGCAACTCATTTTCGTATGT 763 Query 740 ATGGACAATCTACATAACTTATATGGCAAGCCGTG 774 |||||| |||||||| ||||| ||||||| ||||| Sbjct 764 ATGGACTATCTACATGACTTACATGGCAAACCGTG 798 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51540234822 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5