BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491637 Length=1673 Score E Sequences producing significant alignments: (Bits) Value AT4G31080.2 | Symbols: | Protein of unknown function (DUF2296)... 1262 0.0 > AT4G31080.2 | Symbols: | Protein of unknown function (DUF2296) | chr4:15120888-15123442 FORWARD LENGTH=1909 Length=1909 Score = 1262 bits (683), Expect = 0.0 Identities = 855/934 (92%), Gaps = 27/934 (3%) Strand=Plus/Plus Query 760 CAGAGATATGACCCCGACCCAGCGGCAAAAGCAGCTGCTGCAACTGTTCTGGCATCCAAA 819 |||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||||||| Sbjct 853 CAGAGATATGACCCGGACCCAGCTGCAAAGGCAGCTGCCGCAACTGTCCTGGCATCCAAA 912 Query 820 TTGGGTGCCGATTCAGGCTTGAAAGTATTTTTAGGAGATGAATCCCAACTAGATCCATCC 879 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 913 TTGGGTGCCGATTCAGGCTTGAAAGTATATTTAGGAGATGAATCCCAACTCGATCCATCC 972 Query 880 TCGGGCAAGAGCAATGACATGGAGGTTAACCAATCACGTGGGTTGAGGAATCGAAGACAA 939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 973 TCGGGCAAGAGCAATGACATGGAGGTTAACCAATCACGTGGGTTGAGGAATCGAAGGCAA 1032 Query 940 CCAAATACAAGACCCCACGGTTCTGGGAGCACTTCAACACATCATTCTGATGATGAGTCT 999 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1033 CCAAATACAAGACCCCACGGTTCTGGGAGCACTTCAACACATCATTCTGATGATGAGTCT 1092 Query 1000 CACCATTCTGGAACAAGCGAGAGATTTCCAGGCGCCACAGAGCAAAACCAGCAGATGTTG 1059 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1093 CACCATTCTGGAACAAGCGAGAGATTTCCAGGCACCACAGAGCAAAACCAGCAGATGTTG 1152 Query 1060 GTTGAGCATTACAGCCCTCAGGGATATGCTGCTCACGATGGCAGTTGGATCTCACGCATT 1119 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1153 GTTGAGCATTACAGCCCTCAGGGATATGCTGCTCATGATGGCAGTTGGATCTCACGCATT 1212 Query 1120 GCAGCTCTACTTGTGGGCGAAGATCCCACACAATCATATGCACTCATTTGTGGAAACTGT 1179 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1213 GCGGCTCTACTTGTGGGCGAAGATCCCACACAATCATATGCGCTCATTTGTGGAAACTGT 1272 Query 1180 CATATGCATAATGGACTTGCTCGGAAAGAGGATTTTGCATACATTACATACTATTGCCCT 1239 | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1273 CGTATGCACAATGGACTTGCTCGGAAAGAGGATTTTGCTTACATTACATACTATTGCCCT 1332 Query 1240 CACTGTAATGCTCTGAACAAACCGAAGCATACAGAGGAGAACGCACTTCTTCCTGCTGTT 1299 |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| || Sbjct 1333 CACTGTAATGCTCTGAACAAACCGAAGCATTCAGAGGAGAATGTACTTCTTCCTGCTATT 1392 Query 1300 TCTGCTTCGCCGATCATAGACTCACTGCCATTGATTGAAACCAGCGAAGTGGTTAATAGC 1359 || ||||| || |||| |||||| |||||| ||||||| ||||||||||||||||||||| Sbjct 1393 TCCGCTTCACCAATCACAGACTCTCTGCCACTGATTGAGACCAGCGAAGTGGTTAATAGC 1452 Query 1360 AGCAGCTCGAGTAGTGAACGTGGAAATAGCCCCGCTCCAGAAATAAAAGAGGAAGCTGTG 1419 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 1453 AGCAGCTCGAGTAGTGAACGTGGAAGTAGCCCCACTCCAGAAATAAAAGAGGAAGCTGCA 1512 Query 1420 ACTGCTGAGACCGGGACAGCTAGCTGAGGAAGATTCAGTGAGCTAAAGAAGAAGGCTTTC 1479 | | |||||||||||||| | ||||||||||||| ||||||||||| ||||||||||| Sbjct 1513 ATTACTGAGACCGGGACACCGAGCTGAGGAAGATCCAGTGAGCTAA-GAAGAAGGCTTAG 1571 Query 1480 TTGTGTTGCTGTTACGGAAAAGAGAGATtgtgtgtgtgtgtgtgtTTGTGGATGCGAGTA 1539 | |||||| || ||| || |||||| ||||||||| |||||||||||||||||||||| Sbjct 1572 TCGTGTTGGTGCTACAGAGAAGAGATTTTGTGTGTGCATGTGTGTTTGTGGATGCGAGTA 1631 Query 1540 CTCGTTCAGGTAATCTTATGCTA-------CT--TA----------C--A--GTTTTGAT 1576 ||| ||||||||||||||||||| || || | | |||||||| Sbjct 1632 CTCATTCAGGTAATCTTATGCTATGGATTGCTAATATATGAAGGTGCTTACAGTTTTGAT 1691 Query 1577 TTTGGTCTGTTTCTATACAACAAGACAATAGGGTTTTGGTGGGTAAATATACGATTCTGA 1636 | |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1692 TCTGGTTTGTTTCTATACAACAAGACAATAGGGTTTTGGTGGGTAAATATGCGATTCT-A 1750 Query 1637 -TGTCGTAAACTATGATTGTTATACGATTTTGGG 1669 |||||||||| | |||||||||||| ||||||| Sbjct 1751 CTGTCGTAAACGACGATTGTTATACG-TTTTGGG 1783 Score = 1088 bits (589), Expect = 0.0 Identities = 717/772 (93%), Gaps = 35/772 (5%) Strand=Plus/Plus Query 1 GTACCGGTGGATCTCGAATTCCTCCACCCTTTCCCTTTTGGCTTCTCGAAGGAGAAGAAA 60 ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct 7 GTACCGGTGGATCTCGAATTCCT-----C---CCC-TTTGGCTTCTCGAAGGAGAAGAAA 57 Query 61 ACTGTCGgagagagagagagagaAGAAGGCAATCATCATCGCCAGTTGTTCTGT-TCTTC 119 | |||| | |||||| | |||||||| ||||||||||||||||||||||| | ||||| Sbjct 58 AGTGTC---G-GAGAGA-A-AGAAGAAGCCAATCATCATCGCCAGTTGTTCT-TCTCTTC 110 Query 120 GAGATATTCAAATTCTCCGTCTCTAGAGAATTTCAGATCAAGAGAATCAGGCAAGTGGGC 179 ||||||||||||| ||||||||||||||||||||| ||||||||||| | ||| | Sbjct 111 GAGATATTCAAATCCTCCGTCTCTAGAGAATTTCATATCAAGAGAAT----C-AGT--G- 162 Query 180 GATTCTGTAGTTTGTGGTGGTGGTGGTTGGAAGGT--GATAGGATATGGCGCAGGAGCAG 237 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 163 GTTTCTGTAGTTTGTGGTGGTGGTGGTTGGAAGGTAAGATAGGATATGGCGCAGGAGCAG 222 Query 238 GAAGGAGCGGTGGTTGAGAGCGATGTGCCGAATGATTCCGT-CGCCGCTGCTGT-G--G- 292 ||||||||||| ||||||| | || ||||||||||||| | ||||||||| || | | Sbjct 223 GAAGGAGCGGTCGTTGAGAAAGGTGAGCCGAATGATTCC-TCCGCCGCTGCCGTGGCCGC 281 Query 293 --CCGCAACCGCAACCGCCGATAGCGTGAAGAAGAAGCAAAAGGGATTCTTCTCGCGTTT 350 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 282 AACCGCAACCGCAACCGCCGATAGCGTGAAGAAGAAGCAAAATGGATTCTTTTCGCGTTT 341 Query 351 ATGGAATGGGATATTTAGGGTTAGAGGTGACGATTTTGAGAAGAGACTTCAATACATCTC 410 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 342 GTGGAATGGGATATTTAGGGTTAGAGGTGACGATTTCGAGAAGAGACTTCAATACATCTC 401 Query 411 AAGGGAAGAAGCTACTGTTTTATCAAGGATGAAGCGTAGATCGATTACATGGAGGAAACT 470 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 402 AAGGGAAGAAGCTACTGTTTTATCAAGGATGAAGCGTAGATCGATTTCATGGAGGAAACT 461 Query 471 CACCAGAAATCTCATCGTTTCCTCCGTATTATTCGAGATAATTGCTGTGGGTTATGCGAT 530 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 462 CACCAGAAATCTCATCGTTTCCTCTGTATTATTCGAGATAATTGCTGTGGGTTATGCGAT 521 Query 531 CCTGACAACCAGAACGGAAGATTTGGATTGGAGAATGAGGAGTTTCCGGATCTTGCCAAT 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 CCTGACAACCAGAACGGAAGATTTGGATTGGAGAATGAGGAGTTTCCGGATCTTGCCAAT 581 Query 591 GTTTATCTTACCTGCTGTTTCTGCTCTTGCTTATTCCTCAATCGTCAGCTTCTCAAAGAT 650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 582 GTTTATCTTACCTGCTGTTTCTGCTCTTGCTTATTCCTCAATCGTCAGCTTCTCAAAGAT 641 Query 651 GTTTGACCGCAGAGATCAAAAGACCTTGGAAAAGCTTCGAGCAGAAAGGTTGGCTAAAAT 710 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 642 GTTTGACCGCAGAGATCAAAAGACCTTGGAAAAGCTTCGAGCTGAAAGGTTGGCGAAAAT 701 Query 711 CAATGAGCTTAAAGAAAGGACCAATTATTATACCACACAACAACTTATTCAG 762 |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 CAATGAACTTAAAGAAAGGACCAATTATTATACCACACAACAACTTATTCAG 753 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82680297615 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5