BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491767 Length=299 Score E Sequences producing significant alignments: (Bits) Value AT4G29905.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 324 3e-88 > AT4G29905.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14626921-14627631 REVERSE LENGTH=711 Length=711 Score = 324 bits (175), Expect = 3e-88 Identities = 198/209 (95%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 1 ATGTGTTTGGAAGTTGTGTATCATGAAGAGAAGACGGAGCTAGGTCGGCAACAAGCACCG 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 202 ATGTGTTTGGAAGTTGTGTATCATGAAGAGAAGACGGAGCTTGGTCGGCAACAAGCACCA 261 Query 61 GGGATGTGTCCATATTGCGGCGGAAAAGTATCGGCGGTTGATATAGAGACAAAGTGGTTG 120 ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 262 GGGATGTGTCCTTATTGCGGCGGAAAAGTATCGGCGGTGGATATAGAGACGAAGTGGTTG 321 Query 121 TTCTGTTTCTTACCACTTTGTTTCAAGGTCAAACGCAAGTACTCTTGTTCTTCCTGCGAC 180 |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 322 TTCTGTTTCTTACCACTTTGTTTCAAGGTCAAACGCAAATACTCATGTTCTTCGTGCGAG 381 Query 181 CGTCGTCTCGTCTTGTATTATTGAA-AAA 208 |||| |||||||||||||||||||| ||| Sbjct 382 CGTCATCTCGTCTTGTATTATTGAAGAAA 410 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13823630975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5