BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491808 Length=1676 Score E Sequences producing significant alignments: (Bits) Value AT4G29490.1 | Symbols: | Metallopeptidase M24 family protein |... 2501 0.0 > AT4G29490.1 | Symbols: | Metallopeptidase M24 family protein | chr4:14487894-14491525 FORWARD LENGTH=1714 Length=1714 Score = 2501 bits (1354), Expect = 0.0 Identities = 1582/1690 (94%), Gaps = 24/1690 (1%) Strand=Plus/Plus Query 1 TTTATTATTAGGCCTCGCCGG-aaaa-aaaaaaC-ACCCCAATCATCGTCATGTCGTCTC 57 ||||||||||||||| ||||| |||| ||||||| | | | ||| ||||||||||||||| Sbjct 1 TTTATTATTAGGCCTTGCCGGAAAAACAAAAAACTAGCTC-ATCGTCGTCATGTCGTCTC 59 Query 58 TGTCTCCTCCACCGATTCCTATGGAGCTCCACGCCGGTAACCGGCAAAAGCTCCTTGATT 117 ||||||||||||||||||| ||||| |||||||||||||||||| ||||| | || || | Sbjct 60 TGTCTCCTCCACCGATTCCAATGGAACTCCACGCCGGTAACCGGAAAAAGTTACTAGAAT 119 Query 118 CAATACGCCGTCACTTATCTAATTCCAATTGTTCTCTAGATGGATTCGTTTTTCTACAGG 177 ||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| ||||||||| Sbjct 120 CAATACGCCGTCAGTTATCTAGTTCCAATCGTTCTCTCGATGGATTTGTTCTTCTACAGG 179 Query 178 GTGGTGAGGAGAAAAATCGATACTGCACTGATCACACCGAGCTCTTCAGGCAGGAGAGTT 237 |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 180 GTGGCGAGGAGAAAAATCGATACTGTACTGATCACACCGAGCTCTTCAGGCAAGAGAGTT 239 Query 238 ATTTTGCTTACTTGTTTGGTGTCAGAGAGCCTGATTTTTATGGAGCTATTGACGTTGGAA 297 ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct 240 ATTTTGCTTACTTGTTTGGAGTCAGAGAGCCAGATTTCTATGGAGCTATTGACATTGGAA 299 Query 298 GTGGGAAATCTATCCTTTTTATTCCAAGGTTGCCTGTTGATTATGCTGTCTGGTTAGGG- 356 |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| Sbjct 300 GTGGGAAATCTATCCTTTTTATTCCAAGGTTGCCTGATGATTATGCTGTTTGGTT-GGGA 358 Query 357 GAGATAAAGCCGTTGTCGCATTTTAAGGAAACATATATGGTTGACATGGTTTTCTATGTG 416 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 GAGATTAAGCCATTGTCGCATTTTAAGGAAACATATATGGTTGACATGGTTTTCTATGTG 418 Query 417 GATGAGATTATTCAAGTCTTTAATGAACAATTTAAGGGATCTGGAAAGCCTCTGTTGTAT 476 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 419 GATGAGATTATTCAAGTCTTTAATGAACAATTTAAGGGATCTGGAAAGCCCCTGTTGTAT 478 Query 477 CTCTTGCATGGTCTTAACACCGACAGCAGTAACTTCTCAAAACCTGCCAGCTTTGAGGGG 536 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 479 CTCTTGCATGGTCTTAATACTGACAGCAGTAACTTCTCAAAACCTGCCAGCTTTGAGGGG 538 Query 537 ATAGAAAAGTTTGAGACTGATTTGACTACTTTACATCCTATATTGGCGGAATGTCGAGTT 596 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 539 ATAGACAAGTTTGAGACTGATTTGACTACTTTACATCCTATTTTGGCGGAATGTCGAGTT 598 Query 597 ATTAAATCAAGTTTGGAGCTTCAAGTAATACAGTTTGCAAATGATATCAGTTCTGAAGCT 656 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 599 ATTAAATCAAGTTTGGAGCTTCAACTAATACAGTTTGCAAATGATATAAGTTCTGAAGCT 658 Query 657 CATATAGAGGTTATGAGGAGAGTCACACCTGGCATGAAGGAATATCAGATGGAAAGTATG 716 ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| Sbjct 659 CATATAGAGGTTATGAGGAAAGTCACACCGGGCATGAAAGAATATCAGATGGAAAGTATG 718 Query 717 TTTATGCATCACAGCTACATGTACGGTGGCTGTAGGCATTGCTCATACACATGTATTTGT 776 ||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 719 TTTTTGCATCACAGCTACATGTACGGTGGCTGTAGGCATTGCTCGTACACATGCATTTGT 778 Query 777 GCAACAGGGGATAACAGTGCTGTTCTTCATTATGGGCATGCTGCGGCTCCAAATGATAGG 836 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 779 GCAACAGGGGATAATAGTGCTGTTCTTCATTATGGGCATGCTGCGGCTCCAAATGATAGG 838 Query 837 ACTTTCGAAGACGGAGATTTGGCATTGCTTGATATGGGTGCTGAATACCATTTTTATGGG 896 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 ACTTTTGAAGATGGAGATTTGGCATTGCTTGATATGGGTGCTGAATACCATTTTTATGGG 898 Query 897 TCTGACATAACCTGCTCATTCCCCGTCAATGGTAAATTTACTAGCGACCAGAGTCTAATC 956 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 899 TCTGACATAACATGCTCATTCCCCGTCAATGGTAAATTTACAAGTGACCAGAGTCTAATC 958 Query 957 TACAATGCTGTTCTGGATGCTCATAATTCTGTAATCTCTGCGATGAAACCAGGAGTAAAC 1016 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 959 TACAATGCTGTTCTGGATGCACATAATTCTGTAATCTCTGCGATGAAGCCAGGAGTAAAC 1018 Query 1017 TGGGTGGATATGCACAAGTTAGCCGAAAAAATCATCATTGAGTCACTGAAGAAGGGGTCC 1076 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 1019 TGGGTGGATATGCACAAGTTAGCTGAAAAAATCATCCTTGAGTCACTGAAGAAGGGGTCC 1078 Query 1077 ATCCTCACTGGTGATGTGGACGACATGATGGTACAACGCTTAGGTGCTGTTTTCATGCCT 1136 || |||||||||||||| || |||||||||||||| ||||| |||||||||||||||||| Sbjct 1079 ATACTCACTGGTGATGTAGATGACATGATGGTACAGCGCTTGGGTGCTGTTTTCATGCCT 1138 Query 1137 CATGGACTAGGTCACTTCATGGGCATTGACACACATGATACCGGTGGTTACCCAAAGGGA 1196 |||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||||||| Sbjct 1139 CATGGACTAGGTCACTTCATGGGCATCGACACTCACGATACTGGTGGCTACCCAAAGGGA 1198 Query 1197 GTGGAGAGACCAAAGGAACCTGGATTGAAGTCATTACGCACAGCAAGAGACCTTCTTGAA 1256 ||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||| Sbjct 1199 GTGGAGAGACCAAAGAAACCTGGATTGAAGTCATTACGAACTGCAAGAGACCTACTTGAA 1258 Query 1257 GGAATGGTAATAACGGTGGAACCAGGATGCTATTTCATCAAGGCATTGCTATTCCCAGCC 1316 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1259 GGAATGGTAATAACGGTGGAACCAGGATGCTATTTCATCAAGGCATTGCTGTTCCCAGCC 1318 Query 1317 ATGGAAAACGAAACAACCTCTAAGTTCTTCAACCGTGAAACAATAGAGAGATTCAGAAAC 1376 |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 ATGGCAAACGCAACAACCTCTAAGTTCTTCAACCGTGAAACAATAGAGAGATTCAGAAAT 1378 Query 1377 TTCGGAGGTGTCAGAATCGAAAGTGATTTGGTCGTTACTGCGAATGGCTGCAAGAACATG 1436 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1379 TTCGGAGGTGTCAGAATCGAAAGCGATTTGGTCGTTACTGCTAATGGCTGCAAGAACATG 1438 Query 1437 ACGAATGTTCCGCGAAAGACATGGGAGATCGAAGCTGTGATGGCTGGAGGGCCTTGGCCA 1496 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 ACGAATGTTCCACGAGAGACATGGGAGATCGAAGCTGTGATGGCTGGAGGGCCTTGGCCA 1498 Query 1497 CCGAGCAAGTGATCATAACTACTCTTAG-C--CT-ATGGAAATTAAAAACTTGATAAG-A 1551 |||| ||||||||| || |||||||||| | || ||||||||||||||||||||||| | Sbjct 1499 CCGACCAAGTGATCGTAGCTACTCTTAGGCAGCTTATGGAAATTAAAAACTTGATAAGTA 1558 Query 1552 GAAACTCAATAATAATACAACCTTTGT----GTTAATTGGAATAAG-AACTATTGCCTGT 1606 ||||||||||||| |||||||| | |||||| |||||||| || ||||||||| Sbjct 1559 -AAACTCAATAATA---CAACCTTTATTTTTGTTAATGGGAATAAGGAAAAATTGCCTGT 1614 Query 1607 GTTTTACTAATCTAGTACTACTGTACATGTTGTTTTGTTTCAGTGTCTTGTTTGTGTGGT 1666 ||||||||||||| |||| | |||| | || |||||||||||||||||||||||||||| Sbjct 1615 GTTTTACTAATCTTGTAC-A-TGTAG-T-TTATTTTGTTTCAGTGTCTTGTTTGTGTGGT 1670 Query 1667 CGGATATTAA 1676 ||||||||| Sbjct 1671 TGGATATTAA 1680 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82830899250 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5