BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491857 Length=2509 Score E Sequences producing significant alignments: (Bits) Value AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase fam... 3803 0.0 > AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase family | chr4:14297044-14302147 REVERSE LENGTH=2565 Length=2565 Score = 3803 bits (2059), Expect = 0.0 Identities = 2396/2549 (94%), Gaps = 62/2549 (2%) Strand=Plus/Plus Query 1 TGTAAACTCCTGATTTATCAAAGGGCCCAATTATAACaaaaaaaCCAGATCTTTATCCAA 60 |||||||||||||||||||||||| |||| || || | | |||||||||||||||||||| Sbjct 11 TGTAAACTCCTGATTTATCAAAGGCCCCATTTTTATC-ACAAAACCAGATCTTTATCCAA 69 Query 61 TTTTGTCACTCACCGAACGCTAAAGTTTTCATTTTTCAATCTCATCACAGAGAAAAACTA 120 ||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||| | Sbjct 70 TTTTGTCACTCACCGAATAATAAAGCTTTCATTTTTCAATCTCAT--CAGAGAGAAA-TT 126 Query 121 ATAGCTATGGCGAAGAAGATTGGAGTGACGATGGATGTTGGGAACGATGGTGTTGCTGTC 180 | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 127 A-AGCTATGGCGAAGAAGATTGGAGTAACGATGGAAGTTGGGAACGATGGTGTTGCTGTC 185 Query 181 ATCACCATTTCTAATCCTCCTGTTAACTCTTTGGCCAGTCCAATTATTTCTGGGTTGAAG 240 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 186 ATCACCATTTCTAACCCTCCTGTTAACTCTTTAGCCAGTCCAATTATTTCTGGGTTGAAG 245 Query 241 GAGAAGTTTCGAGACGCCAATCAAAGGAATGATGTTAAGGCCATCGTATTGACT-GGGAA 299 ||||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 246 GAGAAGTTTCGTGACGCCAATCAAAGGAATGATGTTAAGGCCATCGTGTTGA-TCGGGAA 304 Query 300 CAATGGAAGATTTTCGGGTGGTTTTGATATCAATGTCTTCCAGCAAGTTCATAAGACTGG 359 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 305 CAATGGAAGATTTTCGGGTGGTTTTGATATCAATGTCTTTCAGCAAGTTCATAAGACTGG 364 Query 360 GGATTTATCGCTTATGCCTGAAGTATCTGTTGAGCTCGTGTGTAACCTGATGGAAGACTC 419 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 365 GGATTTATCGCTTATGCCTGAAGTATCTGTTGAGCTTGTGTGTAACCTGATGGAAGACTC 424 Query 420 TAGGAAGCCGCTTGTTGCTGCAGTTGAAGGATTAGCTCTTGGTGGTGGTTTAGAACTGGC 479 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 425 CAGGAAGCCGGTTGTTGCTGCAGTTGAAGGATTAGCTCTTGGTGGTGGTTTGGAACTTGC 484 Query 480 TATGGCGTGTCATGCCCGTGTTGCTGCTCCGAAAGCTCAACTAGGCTTACCAGAATTGAC 539 ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||| Sbjct 485 AATGGCGTGTCATGCCAGAGTTGCTGCTCCGAAAGCTCAATTAGGCTTACCAGAACTGAC 544 Query 540 TCTTGGAGTGATTCCAGGTTTTGGAGGAACCCAACGTCTTCCAAGGCTAGTAGGCCTTGC 599 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 545 TCTTGGAGTGATTCCTGGTTTTGGAGGAACCCAACGTCTTCCAAGGTTAGTAGGCCTTGC 604 Query 600 AAAAGCAACGGATATGATACTGCTTTCGAAGTCAATATCGTCAGAAGAGGGGCAGAAACT 659 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct 605 AAAAGCAACGGATATGATACTGCTTTCTAAGTCAATATCCTCAGAAGAGGGGCACAAACT 664 Query 660 GGGTCTTATTGATGCCTTGGTGCCACCTGGAGATGTGTTGAGCACGTCCAGAAAGTGGGC 719 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 665 GGGTCTCATTGATGCCTTGGTGCCACCTGGAGATGTGTTGAGCACATCCAGAAAGTGGGC 724 Query 720 TCTAGATATTGCAGATGGACGTAAACCCTTTTTGC-GCTCACTGCACAGGACCGACAAAA 778 |||||| |||||||| ||||||||||||||| ||| | ||||||||||| |||||||||| Sbjct 725 TCTAGACATTGCAGAGGGACGTAAACCCTTTCTGCAG-TCACTGCACAGAACCGACAAAA 783 Query 779 TTGGTTCTTTATCTGAAGCTCGTGCTATATTAAAGAATTCAAGACAGCTAGCCAAGAAGA 838 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 784 TTGGTTCTTTATCTGAAGCTCGTGCTATATTGAAGAATTCAAGACAGCTAGCCAAGAAGA 843 Query 839 TAGCCCCAAATATGCCTCAGCACCATGCTTGCATTGAGGTGATTGAAGAAGGAATCGTCC 898 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 844 TTGCCCCAAATATGCCTCAGCACCATGCTTGCATTGAGGTGATTGAAGAAGGAATCATCC 903 Query 899 ATGGAGGATATAGTGGGGTTCTTAAGGAAGCAGAAGTTTTCAAGCAACTAGTACTGTCAG 958 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 904 ATGGAGGATACAGTGGGGTTCTCAAGGAAGCAGAAGTTTTCAAGCAACTAGTACTGTCAG 963 Query 959 ACACTGCAAAGGGTCTTGTTCATGTTTTCTTCGCACAACGTGCAACATCAAAAGTGCCTA 1018 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 964 ACACTGCAAAGGGTCTTGTTCATGTTTTCTTTGCACAACGTGCAACATCAAAAGTGCCTA 1023 Query 1019 ATGTAACTGACGTTGGATTGAAACCGAGGCCGATaaaaaaaGTTGCAGTTATTGGTGGAG 1078 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1024 ATGTAACTGACGTTGGATTGAAACCAAGGCCGATAAAAAAAGTTGCAGTTATTGGTGGCG 1083 Query 1079 GTCTGATGGGTTCTGGCATCGCTACGGCTCTACTTCTAAGCAATATAAGAGTTGTGCTTA 1138 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1084 GTCTGATGGGTTCAGGCATCGCTACGGCTCTACTTCTAAGCAATATAAGAGTTGTGCTCA 1143 Query 1139 AAGAAATAAATTCAGAATACCTTATGAAGGGAACAAAATCAGTTGAAGCAAATATCAAAG 1198 |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||| Sbjct 1144 AAGAAATAAACTCAGAATTCCTTATGAAGGGAATAAAATCAGTTGAAGCAAATATGAAAA 1203 Query 1199 GCTTGGTATCTAGGGGGAAACTGACACAAGATAAAGCAGGAAAGGCCCTCTCTTTGTTCA 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1204 GCTTGGTATCTAGGGGGAAACTGACACAAGATAAAGCAGGAAAGGCCCTCTCTTTGTTCA 1263 Query 1259 AGGGAGTACTCGACTACACAGAATTCAAAGATGTGGACATGGTCATAGAGGCAGTGATTG 1318 |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1264 AGGGAGTACTTGATTACACAGAATTCAATGATGTGGACATGGTCATAGAGGCAGTGATTG 1323 Query 1319 AAAACATTCAGTTGAAACAAAACATATTCAAAGAAATCGAAAAGGTTTGTTCACCCCATT 1378 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1324 AAAACATTCAATTGAAACAAAACATATTCAAAGAAATCGAAAAGGTTTGTTCACCCCACT 1383 Query 1379 GCATTTTGGCGAGTAATACATCTACTATCGACCTCGACGTAATTGGGGAAAAGACTAACT 1438 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1384 GCATTTTGGCGAGTAATACATCTACTATCGACCTCGATGTAATTGGTGAAAAGACTAACT 1443 Query 1439 CAAAAGATCGCATTGTTGGCGCACATTTCTTCAGCCCGGCCCATCTGATGACCCTTCTCG 1498 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 1444 CAAAAGATCGCATTGTTGGCGCACATTTCTTCAGTCCGGCCCATCTGATGCCCCTTCTCG 1503 Query 1499 AGATTGTTCGTTCAAAGAATACTTCTGCTCAGGTGATTTTGGATCTCATGGCGGTTGGAA 1558 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1504 AGATTGTTCGTTCAAAGAATACTTCTGCTCAGGTGATTCTGGATCTCATGGCGGTTGGAA 1563 Query 1559 AGGCCATAAAGAAAGTTCCCGTGGTGGTTGGAAACTGCATAGGCTTTGCAGTGAATAGGA 1618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1564 AGGCCATAAAGAAAGTTCCCGTGGTGGTTGGAAACTGCATAGGCTTTGCAGTGAATAGGA 1623 Query 1619 CATTCTTTCCGTATACACAAGCTGCACATATGTTGGCCAATCTAGGTGTTGACTTGTTCA 1678 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1624 CATTCTTTCCTTATTCACAAGCTGCACATATGTTGGCCAATCTAGGTGTTGACTTGTTCA 1683 Query 1679 GAATTGACAGCGTGATTACCTCTTTCGGCTTGCCGTTGGGCCCTTTCCAGCTTGGTGATT 1738 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1684 GAATTGACAGCGTTATTACCTCTTTCGGCTTGCCATTGGGCCCTTTCCAGCTTGGTGATT 1743 Query 1739 TGGCTGGACACGGGATTGGATTAGCAGTTGGGCCGATATATGCCAAGGTCTATGGTGACC 1798 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1744 TGGCTGGACACGGGATTGGATTAGCAGTTGGGCCGATATATGCCAAGGTCTATGGTGACC 1803 Query 1799 GCATGTTCAGATCTCCAATGACCGAGCTTCTTCTTAAGAGCGGGCGAAATGGAAAAATCA 1858 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1804 GCATGTTCAGATCTCCAATGACAGAGCTTCTTCTTAAGAGCGGGCGAAATGGAAAAATCA 1863 Query 1859 ACGGGAA-AGGATACTATATATACGAAAAGGGAAGCAAACCAAAACCCGATCCATCAGTG 1917 |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1864 ACGG-AAGAGGATACTATATATACGAAAAGGGAAGCAAACCAAAACCTGATCCATCAGTG 1922 Query 1918 CTTTCAATTGTTGAGGAATCGAGGAAACTGACCAATATAATGCCTGGTGGGAAGCCTATA 1977 ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 1923 CTTTCAATTGTTGAGAAATCAAGGAAACTGACCAATATCATGCCTGGTGGGAAGCCTATA 1982 Query 1978 TCAGTATCTGACAAAGAAATTGTAGAGATGATCTTATTCCCTGTGGTTAACGAGGCATGC 2037 |||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1983 TCAGTAACTGATAAAGAAATTGTAGAGATGATCTTATTCCCTGTTGTCAACGAGGCATGC 2042 Query 2038 CGTGTCCTAGATGAAGGAGTTGTGATCCGAGCCTCAGACTTGGACATTGCGTCTGTCCTT 2097 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2043 CGCGTCCTAGATGAAGGAGTTGTGATCCGAGCCTCAGACTTGGACATTGCGTCTGTCCTT 2102 Query 2098 GGAATGAGTTTTCCTTCTTACCGTGGG-GGAATTGTTTTCTGGGCAGACACAGTTGGACC 2156 ||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| Sbjct 2103 GGAATGAGTTTTCCTTCTTACCG-GGGAGGAATTGTTTTCTGGGCAGACACTGTTGGACC 2161 Query 2157 AAAGTACATATATGAAAGGCTCAAGAGATTGTCGGAGACTTACGGCAGCTTTTTCAAACC 2216 ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 2162 AAAGTACATATATGAGAGGCTCAAGAAATTGTCGGAGACTTATGGCAGCTTTTTCAAACC 2221 Query 2217 GTCGAGGTATCTGGAGGAAAGAGCAATGAATGGAATGCTTTTGAGTGAATCGAAATCGTC 2276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2222 ATCGAGGTATCTGGAGGAAAGAGCAATGAATGGAATGCTTTTGAGTGAATCGAAATCGTC 2281 Query 2277 GAGGTCTCGA-TTGTGAAGCGTTTA-----G-----G-AGA-GG-----CTGAAGGTGTT 2318 |||||| | | |||||||||||||| | | ||| || ||||||||||| Sbjct 2282 GAGGTC-CAAATTGTGAAGCGTTTAATTAAGTATATGCAGAAGGAGAGGCTGAAGGTGTT 2340 Query 2319 AGTCA--AA-TGAGAATAAATCAGTCTCTCTTATTGTTTCAAAGTT-AA--TT-----GC 2367 ||||| || ||| |||||||||||||||||| ||||||||||||| || || || Sbjct 2341 AGTCACTAAATGAAAATAAATCAGTCTCTCTTGTTGTTTCAAAGTTCAAAGTTAAAATGC 2400 Query 2368 TATTAAGGTGT--TTGTTGTTAACACT-T-AAAAGAAACAAATTTTATGCTCTTAATAAA 2423 ||||||||||| |||||||||||||| | |||| |||||| |||| ||||||||||||| Sbjct 2401 TATTAAGGTGTGGTTGTTGTTAACACTCTTAAAATAAACAA-TTTTCTGCTCTTAATAAA 2459 Query 2424 TGTTTGTAGTGATGCCATTGTCATTCTCATATATAAGTTATGATTTGTTCTAGTCAG-GA 2482 |||||||||||| | || || ||| ||| | | ||||||||||||||||| ||| || Sbjct 2460 TGTTTGTAGTGACGTCA--GT--TTC--ATA-A-A-GTTATGATTTGTTCTAGCCAGAGA 2510 Query 2483 AGAAAA-TATAGA-GAAATTTACATCTTT 2509 ||||| ||| || ||||||||||||||| Sbjct 2511 -GAAAAATAT-GAAGAAATTTACATCTTT 2537 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124514352526 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5