BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491884 Length=725 Score E Sequences producing significant alignments: (Bits) Value AT4G28730.1 | Symbols: | Glutaredoxin family protein | chr4:14... 1042 0.0 > AT4G28730.1 | Symbols: | Glutaredoxin family protein | chr4:14199096-14200901 FORWARD LENGTH=792 Length=792 Score = 1042 bits (564), Expect = 0.0 Identities = 677/729 (93%), Gaps = 17/729 (2%) Strand=Plus/Plus Query 1 ACGTCACGAGACAAATTAGCA-CGCAaag-aagacgaagaagaagaagaagaagCTCCAA 58 ||||||||||||||||||||| || | | || | ||||||||||||||||||||||||| Sbjct 1 ACGTCACGAGACAAATTAGCATAGC-ACGCAA-A-GAAGAAGAAGAAGAAGAAGCTCCAA 57 Query 59 GAATCTGTCGCAGAAATCGCCATGGCAGTCACAGCATTTAACCCATTGAAACTTGCATCG 118 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 58 GAATCTGTCGCAGAAATCGCCATGGCAGTCACAGCATTTAACACATTGAAACTTGTATCG 117 Query 119 TCGTCTCTAGATCCGAttccttcaatctcttcttcttcttcttattcattctctttgata 178 ||||||||||||||||||||||| | || |||| |||||||||||| |||||| ||||| Sbjct 118 TCGTCTCTAGATCCGATTCCTTC-A-GTC-TCTTGTTCTTCTTATTCCTTCTCTCTGATA 174 Query 179 tctgtcggatcttctttcAAGAGAAGTCTAAAGCAGTCATGTTCTGTTCGAGCCATGtct 238 | |||||||||| ||| ||||||| |||||||||||||||||||||||||||| ||| Sbjct 175 TATGTCGGATCTCCTTACAAGAGATGTCTAAAGCAGTCATGTTCTGTTCGAGCTATG--- 231 Query 239 tcttcttcttcttcggctgcttcatcttcttcttcttcttccttcGGATCGAGAATGGAA 298 |||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct 232 ACTTCTTCTTCTTCGGCTG---CATCGTCTTCTTCTTCGTCCTTTGGATCGAGAATGGAA 288 Query 299 GAGAGCGTGAGGAAAACAGTGACTGAGAACACTGTCGTTGTTTACTCCAAAACTTGGTGC 358 ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 289 GAGAGTATTAGGAAAACAGTGACTGAGAACACTGTCGTTATTTACTCCAAAACTTGGTGC 348 Query 359 TCATACTGTACTGAAGTGAAGACATTGTTCAAGAGACTTGGGGTTCAGCCACTGGTTATT 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 349 TCATACTGTACTGAAGTGAAGACATTGTTCAAGAGACTTGGGGTTCAGCCACTGGTTGTT 408 Query 419 GAATTGGATCAACTTGGTCCACAAGGGCCACAACTGCAGAAGGTACTGGAAAGACTTACT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 409 GAATTGGATCAACTTGGTCCACAAGGGCCACAACTGCAGAAGGTACTGGAAAGACTTACT 468 Query 479 GGGCAACACACTGTTCCTAATGTTTTTGTCGGAGGCAAGCACATTGGTGGCTGTACAGAT 538 |||||||||||||||||||||||||| || | |||||||||||||||||||| |||||| Sbjct 469 GGGCAACACACTGTTCCTAATGTTTTCGTATGTGGCAAGCACATTGGTGGCTGCACAGAT 528 Query 539 ACAGTGAAGCTTAACAGGAAAGGAGATCTGGAAGTGATGTTAGCTGAAGCCAACGGTAAA 598 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 529 ACAGTGAAGCTTAACAGGAAAGGAGATCTGGAACTGATGTTAGCTGAAGCCAACGGTAAA 588 Query 599 A-CTGGTCAGTCTTGAGGAGGTGATGAAACTGGTTCGGAGATTTT-GCATATGGAGCTTG 656 | | |||||| |||||||| || ||||||||||||||||||||| ||||| |||||||| Sbjct 589 AAC-GGTCAGAGTTGAGGAGATGTTGAAACTGGTTCGGAGATTTTTGCATACGGAGCTTG 647 Query 657 GAAAGTTTTCTCATTTTCGTTATTATCATTGTACCTCATTTGAATACAATAATCATAGTT 716 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 648 GAAAGTTTTCTCATTTTTGTTATTATCATTGTACCTCATTTGAATACAATAATTATAGTT 707 Query 717 AATAAATAA 725 ||||||||| Sbjct 708 AATAAATAA 716 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35163902900 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5