BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491902 Length=1548 Score E Sequences producing significant alignments: (Bits) Value AT4G28610.1 | Symbols: PHR1, AtPHR1 | phosphate starvation resp... 2137 0.0 > AT4G28610.1 | Symbols: PHR1, AtPHR1 | phosphate starvation response 1 | chr4:14132856-14135259 REVERSE LENGTH=1693 Length=1693 Score = 2137 bits (1157), Expect = 0.0 Identities = 1443/1571 (92%), Gaps = 59/1571 (4%) Strand=Plus/Plus Query 1 AGGACAGCAATGGAGGCTCGTCCGGTACAGAGATCAGGTTCGAGAGAGCTCAGTAGTAAC 60 |||||| |||||||||||||||| || || ||||||||||| | || || || Sbjct 147 AGGACAACAATGGAGGCTCGTCCAGTTCATAGATCAGGTTC------G---AG-AG--AC 194 Query 61 CTCGCACGCACTTCTTCAATCCCATCTACACAAAAACCTTCAGCAGCAGAAGATAGTTTT 120 ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 195 CTCACACGCACTTCTTCAATCCCATCTACACAAAAACCTTCACCAGTAGAAGATAGTTTC 254 Query 121 ATCAGACCAGAGAACAACACTCAGTTAATGTCGAG-GCAGTTAGGACAATCCTACCATTT 179 || ||| |||| ||||||| |||||||||||| || || ||||||||| |||||||||| Sbjct 255 ATGAGATCAGATAACAACAGTCAGTTAATGTCTAGACCA-TTAGGACAAACCTACCATTT 313 Query 180 ACTTTCCTCTAGTAACGGTGGAGCTGTTGGACATATATGTTCTTCTTCATCATCCGGTGG 239 |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 314 ACTTTCATCTAGTAACGGTGGAGCTGTTGGACATATATGTTCTTCTTCATCAT-C--TGG 370 Query 240 TTTCTCG-AA-CAATCTCCATTACTCGACTATGGTATCTCATGAG--A-AGCAACATTAC 294 ||| | | || ||||||||||||||| |||||||||||||||||| | | ||||| ||| Sbjct 371 TTT-T-GCAACCAATCTCCATTACTCAACTATGGTATCTCATGAGAAACAACAACACTAC 428 Query 295 GCAGGAAGCAGCAG---TCATGCTGCGCAGACACC--G-AGCAACGATAGTTCTTGGTGT 348 ||||||||||||| | |||||| ||||||||| | | |||||||||| |||||||| Sbjct 429 ACAGGAAGCAGCAGTAATAATGCTGTGCAGACACCAAGCAACAACGATAGTGCTTGGTGT 488 Query 349 CATGATTCATTGCCAGGAGGAGGGTTTCTTGATTTCCATGAAAACAACAACCCTGCCATT 408 |||||||||||||| ||||||||||||||| ||||||| |||| |||||| || ||| Sbjct 489 CATGATTCATTGCC---AGGAGGGTTTCTTGACTTCCATG-AAAC--CAACCCGGCGATT 542 Query 409 CAAAACAACAGTCAAATTGAGGATGGTGGCATTGCTGCTGCCTTTGATGACATTCAAAAA 468 ||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 543 CAAAACAACTGTCAGATTGAGGATGGTGGCATTGCGGCTGCTTTTGATGACATTCAAAAA 602 Query 469 CGAAGTGATTGGCATGAATGGGCTGACCATTTGATCACCGATGAAGATCCTTTGATGTCT 528 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 603 CGAAGTGATTGGCATGAATGGGCTGACCATTTGATCACTGATGATGATCCTTTGATGTCT 662 Query 529 ACTAACTGGAATGATCTCTTGCTTGAAACAAGTTCCAATTCAGATTCAAAGGACCAGAA- 587 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 663 ACTAACTGGAATGATCTCTTGCTTGAAACAAATTCCAATTCAGATTCAAAGGACCAGAAG 722 Query 588 ATCACTGCAAATTCCGCAACCTCAGATTGTTCAGCAGCAACCTTCGCCGTCTGTGGAATT 647 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 723 A-CACTGCAAATTCCGCAACCTCAGATTGTTCAGCAGCAACCTTCTCCGTCTGTGGAATT 781 Query 648 GCGACCTGTTAGCACAACATCTTCAAACAGCAATAACGGAACGGGTAAGGCACGTATGCG 707 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 782 GCGACCTGTTAGCACAACATCTTCAAACAGCAATAACGGAACGGGCAAGGCACGAATGCG 841 Query 708 TTGGACGCCAGAGCTTCACGAGGCTTTTGTTGAGGCTGTCAATAGTCTTGGTGGCAGTGA 767 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct 842 TTGGACGCCAGAGCTTCACGAGGCTTTTGTTGAGGCTGTCAACAGTCTTGGCGGTAGTGA 901 Query 768 AAGAGCTACTCCTAAAGGCGTACTGAAGATTATGAAAGTTGAAGGCTTGACTATTTATCA 827 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 902 AAGAGCTACTCCTAAAGGGGTACTGAAGATTATGAAAGTTGAAGGCTTGACTATATATCA 961 Query 828 TGTCAAAAGCCATTTACAGAAATATAGGACAGCTAGATATCGGCCAGAACCATCAGAAAC 887 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 962 TGTTAAAAGCCATTTACAGAAATATAGGACAGCTAGATATCGGCCAGAACCATCAGAAAC 1021 Query 888 TGGTTCGCCAGAGAA-GAAGTTGACACCGCTTGAACATATAACATCTCTTGATTTGAAAG 946 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1022 TGGTTCGCCAGA-AAGGAAGTTGACACCGCTTGAACATATAACATCTCTTGATTTGAAAG 1080 Query 947 GTGGGATAGGTATTACAGAGGCTCTGCGACTTCAGATGGAAGTACAGAAGCAACTCCATG 1006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1081 GTGGGATAGGTATTACAGAGGCTCTACGACTTCAGATGGAAGTACAGAAGCAACTCCATG 1140 Query 1007 AGCAGCTCGAGATTCAAAGAAACCTGCAACTCCGAATAGAAGAACAAGGCAAGTACCTGC 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 AGCAGCTCGAGATTCAAAGAAACCTGCAACTCCGAATAGAAGAACAAGGCAAGTACCTGC 1200 Query 1067 AAATGATGTTCGAGAAACAAAACTC-GGATCTTGCCAAAGGGACAGCCTCGACATCAGAT 1125 |||||||||||||||| |||||||| || |||| |||||||||||||||| ||||||||| Sbjct 1201 AAATGATGTTCGAGAAGCAAAACTCTGG-TCTTACCAAAGGGACAGCCTCAACATCAGAT 1259 Query 1126 TCCGCAGCCAAATCTGAACAAGAAGACAAGAAAACTGCTGATACAAAGGAGCT-CGCATC 1184 |||||||||||||||||||||||||||||||| ||||||||| | |||||| | | || Sbjct 1260 TCCGCAGCCAAATCTGAACAAGAAGACAAGAAGACTGCTGATTCGAAGGAGGTTC-CAGA 1318 Query 1185 AGAAGAAACCAGGAAATGTGAGGAACCAGAATCTCCACAGCCAAAGCGTCCCAAAACCGA 1244 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1319 AGAAGAAACCAGGAAATGTGAGGAACTAGAATCTCCACAGCCAAAGCGTCCCAAAATCGA 1378 Query 1245 TAATTGAAAGAATTAGTGTTTTGCTGGATAATCTTGGAGTTTCAGAGTTTAACAGTgaga 1304 |||||||||| ||| || |||||||||||||||| |||||||||||||| |||||||| | Sbjct 1379 TAATTGAAAGTATTGGTCTTTTGCTGGATAATCTCGGAGTTTCAGAGTT-AACAGTGATA 1437 Query 1305 gagagaga-gagCTCTTATCTTGAG---CTTCAGGACTTCTCTCGCTACTGTTTAACTAT 1360 |||||| | |||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 1438 GAGAGA-ACGAGCTCTTATCTTGAGGTTCTTCAGGACTTCTCTCTTTACTGTTTAACTAT 1496 Query 1361 TTTTCTGATGGAAGACTCTCTCAACTCAGCTGTGTAGACAAAACAACAGATCCCCGAGAA 1420 |||||||||||||||||||| |||||||||||||||||||| |||||||||||| || | Sbjct 1497 TTTTCTGATGGAAGACTCTC--AACTCAGCTGTGTAGACAAA-CAACAGATCCCCAAGGA 1553 Query 1421 AGAAACAAAACAAAAATAAAGAGTTTAGTTTGGGAGAATCTTCATCATTCGAATGTAATC 1480 |||||||||||||||||||| |||| |||||||||||||||||||||||| | ||||||| Sbjct 1554 AGAAACAAAACAAAAATAAAAAGTT-AGTTTGGGAGAATCTTCATCATTC-AGTGTAATC 1611 Query 1481 TAAATGCTTAACTCAT--T-AGTTTTACCGATACAGATTTCTTATGTTAAATCTTTTTTA 1537 |||||||||||||||| | |||||||| | ||||||||||||||||||| ||||||||| Sbjct 1612 TAAATGCTTAACTCATCATTAGTTTTACAGCTACAGATTTCTTATGTTAA-TCTTTTTTA 1670 Query 1538 GAATATTAAAC 1548 |||||| |||| Sbjct 1671 GAATATCAAAC 1681 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76405229490 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5