BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg491951 Length=851 Score E Sequences producing significant alignments: (Bits) Value AT4G28240.1 | Symbols: | Wound-responsive family protein | chr... 470 1e-131 > AT4G28240.1 | Symbols: | Wound-responsive family protein | chr4:13997292-13998347 REVERSE LENGTH=1056 Length=1056 Score = 470 bits (254), Expect = 1e-131 Identities = 280/293 (96%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 46 TATAATCACTATTAAACCATGAGTTATCTGAACAAAGTGTGGATGGCTGCATCATTCGTA 105 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct 91 TATAATCACTATTAAAGAATGAGTTATCTGAACAAAGTGTGGATGGCAGCATCGTTCGTA 150 Query 106 GCTGTTCAAGGTAACGCCGATCACGGCGTCAAGTTGAAAAGCGGTCTCACCTCTGCTCAC 165 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 151 GCTGTTCAAGGAAACGCCGATCACGGCGTCAAGTTAAAAAGCGGTCTCACCTCTGCTCAC 210 Query 166 CGTCTCCAACGAAGACTTTCCTCCGATCTCCGCCCTCTCGCCGCCGCAGATCTAACAGGA 225 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 211 CGTCTCCAACGAAGACTTTCCTCCGATCTCCGTCCTCTCGCCGCCGCAGATCTAACCGGC 270 Query 226 GACTCTCTCCCCTCGGAAGAAAGACGTCGTACCTCTTCTTCCACTCCTGATGAGTCTCTC 285 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 271 GACTCTCTCCCTTCGGAAGAAAGACGTCGTACCTCTTCTTCCACTCCCGATGAGTCTCTC 330 Query 286 CGCCAAGTCATGTACCTCAACTGCTGGGCTCAAGGCTAAATTCAGATGATGAT 338 || |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 331 CGACAAGTCATGTACCTCAACTGCTGGGCTCAAGGCTAAATTCAGATAATGAT 383 Score = 287 bits (155), Expect = 1e-76 Identities = 283/338 (84%), Gaps = 35/338 (10%) Strand=Plus/Plus Query 392 TCGCTTGAGTTGGATTTTCTGGATGCAACTGTGTATAGTTTTGGTTACATCTCTGTGAAT 451 |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 485 TCGCTTGAGTCGGATTTTCTGGATGCAAC--TGTATAG-TTTGGTTACATCTCTGTGAAT 541 Query 452 ATTAGAATGTTCTAAGAGATCAAAGCAAGTGTTCGAATAT-ATGAGAACTCTGTTCATTT 510 ||||||||||||||| ||||||||||||| || || ||| | ||||||||||||||||| Sbjct 542 ATTAGAATGTTCTAAAAGATCAAAGCAAGCCTTGGATTATGA-GAGAACTCTGTTCATTT 600 Query 511 TCTATATCT-AAAA-ATC-TG-G---A--A--T------C--T-TG-A-T-T-G----CG 542 ||||||||| |||| ||| | | | | | | | || | | | | || Sbjct 601 TCTATATCTTAAAACATCGTTCGCTCACCAACTTTATTACAATCTGGAATCTTGATTGCG 660 Query 543 ATTACCACTAATTTCAACTTTATCCACAGTGAAATGCGATTCTCAATAAAATAATAGTAC 602 |||||||||||||||||||||||||||||| |||| ||||||| ||| ||| |||||||| Sbjct 661 ATTACCACTAATTTCAACTTTATCCACAGTAAAATACGATTCTAAATTAAACAATAGTAC 720 Query 603 CAAA-TGATTCCAAAATCATCGTTATCTATTGAGACAGACAAGTCAGTCACTCCATAATG 661 ||| | ||||||||| |||||||||| | ||||||||||||||||||||||||||||| Sbjct 721 TAAAAT-ATTCCAAAACCATCGTTATCCAAAGAGACAGACAAGTCAGTCACTCCATAATG 779 Query 662 CTTCTATTTATTTATTTATAGTGGTTGTCATTATTGAG 699 ||| ||||||||||| ||| |||||||||||||||||| Sbjct 780 CTTTTATTTATTTATCTATTGTGGTTGTCATTATTGAG 817 Score = 211 bits (114), Expect = 8e-54 Identities = 133/142 (94%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 712 TCTTGGGCTA--TGGCCCATGAATGTAACTTGGCTTTGAATGAAATCGGAGCGCGTCTGC 769 |||||||||| |||||||| ||||||||||||||||||||||||||||||| | |||| Sbjct 910 TCTTGGGCTATTTGGCCCATTTATGTAACTTGGCTTTGAATGAAATCGGAGCGTGGCTGC 969 Query 770 TTCATCTAACGGTCCAAATCTCACGACGCTCCTTAATGGAGTAATGAGTAACGTCTCCTT 829 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 970 TTAATCCAACGGTCCAAATCTGACGACGCTCCTTAATGGAGTAATGAGTAACGTCTCCTT 1029 Query 830 CATTTCCAACGGTCAAATAATC 851 |||||||||||||||||||||| Sbjct 1030 CATTTCCAACGGTCAAATAATC 1051 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41493405422 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5