BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492014 Length=990 Score E Sequences producing significant alignments: (Bits) Value AT4G27700.1 | Symbols: | Rhodanese/Cell cycle control phosphat... 1548 0.0 > AT4G27700.1 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr4:13826374-13827823 REVERSE LENGTH=992 Length=992 Score = 1548 bits (838), Expect = 0.0 Identities = 948/999 (95%), Gaps = 16/999 (2%) Strand=Plus/Plus Query 1 AAGCACCACATGTTCAGAtttttttCCTAACAAGAAG-AAAGAAGTCTCAG-TGCA--G- 55 |||||||||||||||||| |||||||||||||||||| ||||||||| ||| | || | Sbjct 1 AAGCACCACATGTTCAGA-TTTTTTCCTAACAAGAAGAAAAGAAGTCGCAGTTTCATCGT 59 Query 56 -TTTCAT-CATCTCTC-TTCCATT-AATTCTCTCATTTTCAAGGAAATATCTAAAAGAAA 111 |||| | ||| | || | | ||| |||||||||||||||||| |||||||| || ||| Sbjct 60 CTTTCTTCCAT-TATCGTGCAATTAAATTCTCTCATTTTCAAGAAAATATCT-GAA-AAA 116 Query 112 ACAGAAACATAACAGAAGAAGCTTCTCGATCAAGAGATGGCTTCACTTACTTCAATCGCC 171 |||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||| ||| Sbjct 117 ACAGAAACTTAACAGAAGCAGC-T-TCGATCAAGAGATGGCTTCACTTACTTCAATAGCC 174 Query 172 ACGCCTTACCCATCTTCATCGCAGGCTTTGCGTCTGAAATCCTCCGGAAACACTCTTTTC 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 ACGCCTTACCCATCTTCATCGCAGGCTTTGCGTCTGAAATCCTCCGGAAACACTCTTTTC 234 Query 232 TCTGCCGGAGTTCGATCGGCAGCAATGGGTTCCGGTCAAAAAACGCTCAAGATTCAATGC 291 |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| Sbjct 235 TCTGCCGGAGTTCGATCGGCAGCAATGGTTTCCGGTCACAAAACGCTTAAGATTCAATGC 294 Query 292 ACTTCAACGAAACCTGCGAAACCTGCAGCTGAAGTCGATTGGAGACAGAAGAGAGAGCTT 351 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 295 ACTTCAACCAAACCTGCCAAACCTGCAGCTGAAGTCGATTGGAGACAGAAGAGAGAGCTT 354 Query 352 CTATTGGAGAAAAGGGTGAGAAGTGTGGACGTGAAGGAAGCTCAACGGTTACAAAAAGAG 411 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 CTATTGGAGAAAAGGGTGAGAAGTGTGGACGTGAAGGAAGCTCAACGGTTACAAAAAGAA 414 Query 412 AACAACTTTGTGATTCTTGATGTAAGACCAGAGGCAGAGTACAAGGCGGGTCATCCTCCG 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 AACAACTTTGTGATTCTTGATGTAAGACCAGAGGCAGAGTACAAGGCGGGTCATCCTCCG 474 Query 472 GGAGCTATCAATGTGGAGATGTACAGACTGATAAGGGAATGGACGGCATGGGACATAGCT 531 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 475 GGAGCTATCAATGTGGAGATGTACAGACTCATAAGGGAATGGACGGCATGGGACATAGCT 534 Query 532 CGTCGTCTTGGATTTGCGTTCTTCGGTATCTTCTCTGGCACAGAAGAGAATCCTGAGTTT 591 || |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct 535 CGCCGTCTTGGCTTTGCTTTCTTTGGTATCTTCTCTGGCACAGAAGAGAACCCTGAGTTT 594 Query 592 ATTCAAAGTGTAGAAGCTAAACTTGACAAAGAGGCAAAGATCATAGTTGCTTGTTCATCC 651 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 595 ATTCAAAGTGTAGAAGCTAAACTTGACAAAGAGGCAAAGATCATAGTAGCTTGTTCATCC 654 Query 652 GCGGGGACAATGAAGCCAACACAGAATCTTCCTGAAGGACAACAATCGAGGTCTCTCATA 711 ||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct 655 GCGGGTACAATGAAGCCGACACAAAATCTTCCCGAAGGCCAACAATCGAGGTCTCTCATA 714 Query 712 GCTGCTTATCTTCTGGTCCTCAACGGCTATAAGAACGTATTTCACCTAGAAGGTGGAATC 771 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 715 GCTGCTTATCTTCTGGTCCTTAACGGCTATAAGAACGTATTTCACCTAGAAGGTGGAATC 774 Query 772 TACGCATGGGGCAAGGAAGGTCTTCCTGTTGAAACAATTGAAGAAGACTAACCAACTTCT 831 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 TACACATGGGGCAAGGAAGGTCTTCCTGTTGAAACAATTGAAGAAGACTAACCAACTTCT 834 Query 832 TCACTCTAAGAGTTATCCAGTTTTGTATATCTGTCCATTTCAGTTAGTTGCATTTAGAGA 891 | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 TTACTCT-AGAGTTGTCCAGTTTTGTATATCTGTCCATTTCAGTTAGTTGCATTTAGAGA 893 Query 892 TTTGGCTTTTCAGAGAGTGTTTTGAGGTTTGTAAAACTTCAGACTTTACCATGAAATCCA 951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 894 TTTGGCTTTTCAGAGAGTGTTTTGAGGTTTGTAAAACTTCAGACTTTACCATGAAATCCA 953 Query 952 GCAAACTCGACCGGAATCTAGAGAAAAAGAACTTGATTG 990 |||||||||||||||||| |||||||| ||||||||||| Sbjct 954 GCAAACTCGACCGGAATCCAGAGAAAAGGAACTTGATTG 992 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48475951855 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5