BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492153 Length=776 Score E Sequences producing significant alignments: (Bits) Value AT4G26555.1 | Symbols: | FKBP-like peptidyl-prolyl cis-trans i... 1066 0.0 > AT4G26555.1 | Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr4:13404465-13406245 REVERSE LENGTH=848 Length=848 Score = 1066 bits (577), Expect = 0.0 Identities = 740/812 (91%), Gaps = 38/812 (5%) Strand=Plus/Plus Query 1 TCTCTCACTCTTTTTCTTATCCACTATCC--------A-AAGAAGAAGACTATTGACGAC 51 ||||||||||||||||||||||||||||| | |||||||||||| |||||||| Sbjct 1 TCTCTCACTCTTTTTCTTATCCACTATCCATAGAAGAAGAAGAAGAAGACTGTTGACGAC 60 Query 52 GA---C---GGCGATGGCTATGGAGATTTCTCATCGTTTCTTTGGATCATCCATGGCCTT 105 || | ||||||||||||||||||||||| || |||| ||||||||||||||||||| Sbjct 61 GACGGCGATGGCGATGGCTATGGAGATTTCTCTTCCTTTCGTTGGATCATCCATGGCCTT 120 Query 106 AAGCGTGGGAAAATCTAGGAACGGCGTTTCTGGGATTAGTCGTGTTGGATTATCTTCGGT 165 ||||| ||||||||| |||||| |||||||| ||||||||||||||||||| |||||||| Sbjct 121 AAGCGCGGGAAAATCAAGGAACAGCGTTTCTAGGATTAGTCGTGTTGGATTCTCTTCGGT 180 Query 166 TTCGGCCGTACATGTACCCAGAAGGATGTTTATGCAGCTCGT-TGGGTTTGGTTCGGTCT 224 ||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct 181 CTCGGCTGTACATGTACCCAGAAGGATGTTTATGCAGCT-GTCTGGATTTGGTTCGGTCT 239 Query 225 TGACGCTTCTGGATTTTCCTGGTTTAGCGGCGCCGGTTCCTCAAATGAAGGAACCTCAAG 284 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| Sbjct 240 TGACGCTTCTGGATTTTCCTAGTTTAGCGGCGCCGGTTCCTCAGATGAAGGAACCTGAAG 299 Query 285 TTATCAGGACTTTGAAGCTCCCGAGTGGCGTGAGGTTTCAAGAGATAATTGAAGGGGAAG 344 | |||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct 300 TGATCAGGACATTGAAACTCCCGAGTGGCGTGAGGTATCAAGAGATAATTGAAGGTGAAG 359 Query 345 GACGAGAAGCTCATGAAGGGGACCTGGTCGAACTAAACTATGTGTGTCGGCGTGCAAATG 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 GACGAGAAGCTCATGAAGGGGACCTGGTCGAACTAAACTATGTGTGTCGGCGTGCAAATG 419 Query 405 GATATTTCGTTCATAGCACGGTGGACCAATTCAGTGGTGAAAGCTCTCCTGTCAAACTTA 464 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 420 GATATTTCGTTCATAGCACGGTGGATCAATTCAGTGGTGAAAGCTCTCCTGTCAAACTTA 479 Query 465 TTCTTGATGAAAATGACGTAATTGAGGGCTTGAAGGAAGTCTTGGTGGGCATGAAAGCCG 524 |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 480 TTCTCGATGAAAACGACGTAATTGAGGGCTTGAAAGAAGTCTTGGTGGGCATGAAAGCTG 539 Query 525 GGGGGAAGCGAAGAGCACTGATACCTCCATCAGTAGGGTACATAAACGAGACATTGAAGC 584 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GAGGGAAGCGTAGGGCACTGATACCTCCATCAGTAGGGTACATAAACGAGACATTGAAGC 599 Query 585 CAATCCCCGAGGAGTTTGGACCACGACGCAGCCTTCTATCGCATGCGAACGAGCCTCTGG 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CAATCCCCGAGGAGTTTGGACCACGACGCAGCCTTCTATCGCATGCGAACGAGCCTCTGG 659 Query 645 TCTTTGAAATCCAGCTCTTGAAAGTATTATGATATTT-T---GT---T-A-----A-TGA 690 ||||||||||||||||||||||||||||||||||||| | || | | | ||| Sbjct 660 TCTTTGAAATCCAGCTCTTGAAAGTATTATGATATTTGTCCTGTCACTGACTGTTAATGA 719 Query 691 AGTATTTTGGCTGTGAGCT-AGTTTAATTTCTATTGTAAATCTGTAACAACAACTACATG 749 ||||||||||||||||| | | |||| |||||||||||||||||||||||||||| | || Sbjct 720 AGTATTTTGGCTGTGAGATTA-TTTATTTTCTATTGTAAATCTGTAACAACAACTGCTTG 778 Query 750 GAACTG--T--CTT-ATGAGTTCTGCTATAAG 776 ||||| | ||| |||||||||||| |||| Sbjct 779 GAACTACATATCTTGATGAGTTCTGCTTTAAG 810 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37725844397 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5