BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg492153

Length=776
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G26555.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans i...  1066    0.0  


> AT4G26555.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans 
isomerase family protein | chr4:13404465-13406245 REVERSE LENGTH=848
Length=848

 Score = 1066 bits (577),  Expect = 0.0
 Identities = 740/812 (91%), Gaps = 38/812 (5%)
 Strand=Plus/Plus

Query  1    TCTCTCACTCTTTTTCTTATCCACTATCC--------A-AAGAAGAAGACTATTGACGAC  51
            |||||||||||||||||||||||||||||        | |||||||||||| ||||||||
Sbjct  1    TCTCTCACTCTTTTTCTTATCCACTATCCATAGAAGAAGAAGAAGAAGACTGTTGACGAC  60

Query  52   GA---C---GGCGATGGCTATGGAGATTTCTCATCGTTTCTTTGGATCATCCATGGCCTT  105
            ||   |   ||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct  61   GACGGCGATGGCGATGGCTATGGAGATTTCTCTTCCTTTCGTTGGATCATCCATGGCCTT  120

Query  106  AAGCGTGGGAAAATCTAGGAACGGCGTTTCTGGGATTAGTCGTGTTGGATTATCTTCGGT  165
            ||||| ||||||||| |||||| |||||||| ||||||||||||||||||| ||||||||
Sbjct  121  AAGCGCGGGAAAATCAAGGAACAGCGTTTCTAGGATTAGTCGTGTTGGATTCTCTTCGGT  180

Query  166  TTCGGCCGTACATGTACCCAGAAGGATGTTTATGCAGCTCGT-TGGGTTTGGTTCGGTCT  224
             ||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||
Sbjct  181  CTCGGCTGTACATGTACCCAGAAGGATGTTTATGCAGCT-GTCTGGATTTGGTTCGGTCT  239

Query  225  TGACGCTTCTGGATTTTCCTGGTTTAGCGGCGCCGGTTCCTCAAATGAAGGAACCTCAAG  284
            |||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||
Sbjct  240  TGACGCTTCTGGATTTTCCTAGTTTAGCGGCGCCGGTTCCTCAGATGAAGGAACCTGAAG  299

Query  285  TTATCAGGACTTTGAAGCTCCCGAGTGGCGTGAGGTTTCAAGAGATAATTGAAGGGGAAG  344
            | |||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||
Sbjct  300  TGATCAGGACATTGAAACTCCCGAGTGGCGTGAGGTATCAAGAGATAATTGAAGGTGAAG  359

Query  345  GACGAGAAGCTCATGAAGGGGACCTGGTCGAACTAAACTATGTGTGTCGGCGTGCAAATG  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  360  GACGAGAAGCTCATGAAGGGGACCTGGTCGAACTAAACTATGTGTGTCGGCGTGCAAATG  419

Query  405  GATATTTCGTTCATAGCACGGTGGACCAATTCAGTGGTGAAAGCTCTCCTGTCAAACTTA  464
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  420  GATATTTCGTTCATAGCACGGTGGATCAATTCAGTGGTGAAAGCTCTCCTGTCAAACTTA  479

Query  465  TTCTTGATGAAAATGACGTAATTGAGGGCTTGAAGGAAGTCTTGGTGGGCATGAAAGCCG  524
            |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct  480  TTCTCGATGAAAACGACGTAATTGAGGGCTTGAAAGAAGTCTTGGTGGGCATGAAAGCTG  539

Query  525  GGGGGAAGCGAAGAGCACTGATACCTCCATCAGTAGGGTACATAAACGAGACATTGAAGC  584
            | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  540  GAGGGAAGCGTAGGGCACTGATACCTCCATCAGTAGGGTACATAAACGAGACATTGAAGC  599

Query  585  CAATCCCCGAGGAGTTTGGACCACGACGCAGCCTTCTATCGCATGCGAACGAGCCTCTGG  644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  600  CAATCCCCGAGGAGTTTGGACCACGACGCAGCCTTCTATCGCATGCGAACGAGCCTCTGG  659

Query  645  TCTTTGAAATCCAGCTCTTGAAAGTATTATGATATTT-T---GT---T-A-----A-TGA  690
            ||||||||||||||||||||||||||||||||||||| |   ||   | |     | |||
Sbjct  660  TCTTTGAAATCCAGCTCTTGAAAGTATTATGATATTTGTCCTGTCACTGACTGTTAATGA  719

Query  691  AGTATTTTGGCTGTGAGCT-AGTTTAATTTCTATTGTAAATCTGTAACAACAACTACATG  749
            ||||||||||||||||| | | |||| |||||||||||||||||||||||||||| | ||
Sbjct  720  AGTATTTTGGCTGTGAGATTA-TTTATTTTCTATTGTAAATCTGTAACAACAACTGCTTG  778

Query  750  GAACTG--T--CTT-ATGAGTTCTGCTATAAG  776
            |||||   |  ||| |||||||||||| ||||
Sbjct  779  GAACTACATATCTTGATGAGTTCTGCTTTAAG  810



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 37725844397


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5