BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492157
Length=1422
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26530.1 | Symbols: | Aldolase superfamily protein | chr4:1... 2158 0.0
AT4G26520.1 | Symbols: | Aldolase superfamily protein | chr4:1... 1513 0.0
> AT4G26530.1 | Symbols: | Aldolase superfamily protein | chr4:13391344-13393107
FORWARD LENGTH=1372
Length=1372
Score = 2158 bits (1168), Expect = 0.0
Identities = 1306/1373 (95%), Gaps = 8/1373 (1%)
Strand=Plus/Plus
Query 52 TTGGTTGCCATTTGGTAGTGTAGAAGCAATCACTCATTTGCTTTATCGGAGTTGCAGGTA 111
|||||||||||||||| |||||||||||||||| ||||||||||||| | |||||
Sbjct 1 TTGGTTGCCATTTGGTTGTGTAGAAGCAATCACCCATTTGCTTTATC-----CG-AGGTA 54
Query 112 CTTAAGGCTTTGTCTTGGCTTCCTCGTCCTCTTCAGTTAAACTCGTCTCTCTTGCACTCC 171
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 55 CTTAAGGCTTTGTCTTGGCATCCTCGTCCTCTTCAGCAAAACTCGTCTCTCTTGCACTCC 114
Query 172 GAAAAGCAACCATGTCTGCTTTTGTCGGCAAATACGCAGATGAGCTGATTAAGACGGCTA 231
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 115 AAAAAGCAACCATGTCTGCTTTTGTCGGCAAATACGCAGATGAGCTGATAAAGACGGCTA 174
Query 232 AGTACATTGCAACACCGGGAAAGGGCATTTTGGCAGCAGACGAGAGCACAGGAACCATCG 291
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct 175 AGTACATTGCCACACCGGGAAAGGGCATTTTGGCAGCAGACGAGAGCACGGGAACTATTG 234
Query 292 GGAAACGATTCGCCAGCATCAATGTCGAGAACGTTGAGTCCAACCGCCAAGCTCTCCGTG 351
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 235 GGAAACGATTCGCCAGCATCAATGTTGAGAACATTGAGTCCAACCGCCAAGCTCTCCGTG 294
Query 352 AGCTCCTCTTCACTTCCCCTGGCGCTTTCCCTTGCCTCTCTGGTGTTATCCTTTTTGAGG 411
||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || ||||
Sbjct 295 AGCTCCTCTTCACGTCCCCTGGCACTTTCCCTTGCCTCTCCGGTGTTATCCTCTTCGAGG 354
Query 412 AAACCCTCTACCAGAAAACCTCTGATGGCAAACCCTTTGTTGATCTCCTCATGGAGAACG 471
|||||||||||||||||||| | |||||||||||||| ||||| ||||||||||| ||||
Sbjct 355 AAACCCTCTACCAGAAAACCACGGATGGCAAACCCTTCGTTGAGCTCCTCATGGAAAACG 414
Query 472 GAGTTATCCCTGGAATCAAAGTGGACAAGGGTGTGGTTGATCTAGCAGGGACCAACGGCG 531
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 415 GAGTTATCCCTGGAATCAAAGTGGACAAGGGTGTGGTTGATCTAGCAGGAACCAATGGCG 474
Query 532 AGACCACTACTCAGGGTCTAGATTCGCTTGGTGCACGTTGCCAGGAGTATTACAAGGCAG 591
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 475 AGACCACTACTCAGGGTCTAGATTCACTTGGTGCACGTTGCCAGGAGTATTACAAGGCAG 534
Query 592 GAGCCCGGTTTGCAAAATGGCGTGCAGTCCTCAAGATTGGGGCCACCGAGCCAAGCGAGC 651
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 GAGCTCGGTTTGCAAAATGGCGTGCAGTCCTCAAGATTGGGGCCACCGAGCCAAGCGAGC 594
Query 652 TCTCTATCCAAGAGAACGCCAAGGGGCTAGCCCGCTATGCCATCATCTGCCAGGAGAACG 711
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 595 TCTCTATCCAAGAGAACGCCAAGGGGCTAGCCCGCTATGCCATCATCTGCCAGGAGAATG 654
Query 712 GACTGGTCCCGATCGTCGAGCCAGAGGTACTGACCGACGGGAGCCATGACATCAAGAAAT 771
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 GACTCGTCCCAATCGTCGAGCCAGAGGTACTGACCGACGGGAGCCATGACATCAAGAAAT 714
Query 772 GTGCGGCCGTGACGGAGACAGTTCTTGCTGCCGTGTACAAGGCCTTGAACGACCACCATG 831
|||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 715 GTGCAGCGGTGACCGAGACCGTTCTTGCTGCCGTGTACAAGGCCTTGAACGACCACCATG 774
Query 832 TCCTCCTCGAAGGCACTCTGCTTAAACCGAACATGGTCACTCCCGGCTCTGACAGCCCAA 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TCCTCCTCGAAGGCACTCTGCTTAAACCGAACATGGTCACTCCCGGCTCTGACAGCCCAA 834
Query 892 AGGTTGCAGCTGAAGTGATAGCGGAATACACAGTGACTGCTCTGCGCCGCACAGTCCCAC 951
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AGGTTGCACCGGAAGTGATAGCGGAATACACAGTGACTGCTCTGCGCCGCACAGTCCCAC 894
Query 952 CAGCGGTTCCAGGAATCGTGTTCCTCTCAGGCGGACAGAGTGAAGAGGAAGCAACACTAA 1011
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CTGCAGTTCCAGGAATCGTGTTCCTCTCAGGCGGACAGAGTGAAGAGGAAGCAACACTAA 954
Query 1012 ATCTGAACGCAATGAACAAGCTTGATGTATTGAAGCCATGGACGCTGACTTTCTCTTTTG 1071
|||||||||||||||||||||| ||||| |||||||||||||| || |||||||| ||||
Sbjct 955 ATCTGAACGCAATGAACAAGCTCGATGTGTTGAAGCCATGGACTCTCACTTTCTCATTTG 1014
Query 1072 GCCGAGCCCTCCAACAAAGCACTCTCAAGGCTTGGGCAGGTAAGACCGAGAACGTAGCCA 1131
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1015 GCCGAGCCCTCCAACAAAGCACTCTCAAGGCTTGGGCAGGTAAGACAGAGAATGTAGCCA 1074
Query 1132 AAGCTCAAGCCACTTTCCTGACAAGGTGCAAGGGTAACTCGGATGCTACCCTCGGGAAAT 1191
||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1075 AAGCTCAGGCCACTTTCCTGACCAGGTGCAAGGGTAACTCGGACGCTACCCTCGGGAAAT 1134
Query 1192 ACACCGGCGGGGCTTCAGGTGACTCGGCCGCCTCTGAGAGCTTGTATGAGAAAGGATACA 1251
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1135 ACACCGGCGGGGCTTCTGGTGACTCGGCCGCCTCTGAGAGCTTGTATGAGGAAGGATACA 1194
Query 1252 AGTATTAGGAGCGTTTAA-TACGGGTGTCGTCTTTTATACGGTTTGAATATATGTCAAAT 1310
|||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1195 AGTATTAGGAGCGTTTAAATACGGGTGTCGCCTTTTATACGATTTGAATATATGTCAAAT 1254
Query 1311 GTTTCGTGGGCGTTTAACTGTTTAAATGTTTATCGATTTGGTTTAGTGACTGTGTAATGT 1370
||||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 1255 GTTTCGTAGGCGTTTAACTGTTTAAATTTTTATCGATTTGGTTTAGCGTCTGTGTAATGT 1314
Query 1371 TCTTAAACTGTGTTGTGTTTTT-GTGATGATTTCTATAGTATTTTCGCGCCAT 1422
|||||||||||||||||||||| |||||| |||||||| ||||||||||||||
Sbjct 1315 TCTTAAACTGTGTTGTGTTTTTTGTGATGGTTTCTATAATATTTTCGCGCCAT 1367
> AT4G26520.1 | Symbols: | Aldolase superfamily protein | chr4:13388386-13390374
FORWARD LENGTH=1550
Length=1550
Score = 1513 bits (819), Expect = 0.0
Identities = 1189/1363 (87%), Gaps = 43/1363 (3%)
Strand=Plus/Plus
Query 9 TCTTCTCCACATATCCAAGACTTTGGAGATAAAGCTGGGATCATTGG-TTGCCATTTGGT 67
||| |||||||||||||||||||||||||||| ||||| ||| |||| | | ||||||||
Sbjct 101 TCTCCTCCACATATCCAAGACTTTGGAGATAATGCTGGTATCCTTGGCTAG-CATTTGGT 159
Query 68 AGTGTAGAAGCAATCA---CTC---ATTTGC-TT-TATC-GGAGTTGC-AG------GTA 111
||||| |||||||||| ||| | | | || || | | | || | || ||
Sbjct 160 AGTGTCGAAGCAATCATTCCTCGGGCTCTCCTTTCTAACTGCA-TTCCTAGAAAATATTA 218
Query 112 --CTTAAGG-CTTTGTCTTGGCTTCCTCGTCCTCTTCAGTTA--AACTCGTCTCTCTTGC 166
|| |||| |||||||||||| |||||||||||||||| | ||||| ||| |||||
Sbjct 219 CCCTAAAGGCCTTTGTCTTGGCATCCTCGTCCTCTTCAG-CAGGAACTCATCTGTCTTGG 277
Query 167 ACTCCGAA-AAGCAACCATGTCTGCTTTTGTCGGCAAATACGCAGATGAGCTGATTAAGA 225
| ||| | |||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct 278 A---AGAATTA-TTACCATGTCTGCTTTTGTCAGCAAATACGAAGATGAGCTGATCAAGA 333
Query 226 CGGCTAAGTACATTGCAACACCGGGAAAGGGCATTTTGGCAGCAGACGAGAGCACAGGAA 285
|||| |||||||||||||| ||||||| |||||||||||| ||||| |||||||||| ||
Sbjct 334 CGGCCAAGTACATTGCAACGCCGGGAAGGGGCATTTTGGCGGCAGATGAGAGCACAGAAA 393
Query 286 CCATCGGGAAACGATTCGCCAGCATCAATGTCGAGAACGTTGAGTCCAACCGCCAAGCTC 345
|||| ||||||||||||||| | |||||||| |||||| |||||||||||||||||||
Sbjct 394 CCATTGGGAAACGATTCGCCGGAATCAATGTTGAGAACACTGAGTCCAACCGCCAAGCT- 452
Query 346 T-CCGTGAGCTCCTCTTCACTTCCCCTGGC-GCTTTCCCTTGCCTCTCTGGTGTTATCCT 403
| |||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||
Sbjct 453 TACCGTGAGCTCCTCTTCACTTCCCCTGGCAG-TTACCCTTGCCTCTCTGGTGTTATACT 511
Query 404 TTTTGAGGAAACCCTCTACCAGAAAACCTCTGATGGCAAACCCTTTGTTGATCTCCTCAT 463
|| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 512 CTTCGAGGAAACCCTCTACCAGAAAACCTCTGATGGCAAACCCTTCGTCGATCTCCTCAT 571
Query 464 GGAGAACGGAGTTATCCCTGGAATCAAAGTGGACAAGGGTGTGGTTGATCTAGCAGGGAC 523
||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 572 GGAGAACGGTGTTATCCCCGGAATCAAAGTGGACAAGGGTTTGGTTGATCTAGCAGGGAC 631
Query 524 CAACGGCGAGACCACTACTCAGGGTCTAGATTCGCTTGGTGCACGTTGCCAGGAGTATTA 583
||||||||||||||||||||| |||||||| |||||||||||||| || ||| |||||||
Sbjct 632 CAACGGCGAGACCACTACTCAAGGTCTAGACTCGCTTGGTGCACGGTGTCAGCAGTATTA 691
Query 584 CAAGGCAGGAGCCCGGTTTGCAAAATGGCGTGCAGTCCTCAAGATTGGGGCCACCGAGCC 643
| ||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||
Sbjct 692 CGAGGCAGGAGCCCGGTTTGCTAAATGGCGTGCATTCTTCAAGATTGGGGCCACCGAGCC 751
Query 644 AAGCGAGCTCTCTATCCAAGAGAACGCCAAGGG-GCTAGCCCGCTATGCCATCATCTGCC 702
||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct 752 AAGCGTTCTCTCCATCCAAGAGGACGCCA-GGGTGCTAGCCCGCTATGCCATCATCTGCC 810
Query 703 AGGAGAACGGACTGGTCCCGATCGTCGAGCCAGAGGTACTGACCGACGGGAGCCATGACA 762
||||||| ||||| ||||||||||||||||||||||| ||||| | |||||||| ||||
Sbjct 811 AGGAGAATGGACTTGTCCCGATCGTCGAGCCAGAGGTGCTGACAGGTGGGAGCCACGACA 870
Query 763 TCAAGAAATGTGCGGCCGTGACGGAGACAGTTCTTGCTGCCGTGTACAAGGCCTTGAACG 822
|||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||
Sbjct 871 TCAAGAAATGTGCGGCGGTGACTGAGACGGTTCTTGCTGCCGTGTTCAAGGCCTTGAACT 930
Query 823 ACCACCATGTCCTCCTCGAAGGCACTCTGCTTAAACCGAACATGGTCACTCCCGGCTCTG 882
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 931 ACCACCATGTCCTCCTCGAAGGCACTCTGCTTAAACCTAACATGGTCACTCCCGGCTCCG 990
Query 883 ACAGCCCAAAGGTTGCAGCTGAAGTGATAGCGGAATACACAGTGACTGCTCTGCGCCGCA 942
||||||||||||||||| | ||| | || ||||||||||| |||||||||||||||||||
Sbjct 991 ACAGCCCAAAGGTTGCACCGGAACTAATTGCGGAATACACGGTGACTGCTCTGCGCCGCA 1050
Query 943 CAGTCCCACCAGCGGTTCCAGGAATCGTGTTCCTCTCAGGCGGACAGAGTGAAGAGGAAG 1002
||||||||||||| |||| ||||||||||||||||||||| |||| | |||||| |||
Sbjct 1051 CAGTCCCACCAGCTATTCCGGGAATCGTGTTCCTCTCAGGCATACAGCGCGAAGAGCAAG 1110
Query 1003 CAACACTAAATCTGAACGCAATGAACAAGCTTGATGTATTGAAGCCATGGACGCTGACTT 1062
| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1111 CGACACTAAATCTAAACGCAATGAACAAGCTTGATGTGTTGAAGCCATGGACGCTCACTT 1170
Query 1063 TCTCTTTTGGCCGAGCCCTCCAACAAAGCACTCTCAAGGCTTGGGCAGGTAAGACCGAGA 1122
||||||||||| |||||||||| ||||| || ||||||||||||| |||||| ||||||
Sbjct 1171 TCTCTTTTGGCGGAGCCCTCCAGCAAAGTGCTATCAAGGCTTGGGCCGGTAAGCCCGAGA 1230
Query 1123 ACGTAGCCAAAGCTCAAGCCACTTTCCTGACAAGGTGCAAGGGTAACTCGGATGCTACCC 1182
|||||||||||||||| |||| |||||||| |||||||||| |||| ||| |||||||
Sbjct 1231 ACGTAGCCAAAGCTCAGGCCAAGTTCCTGACCAGGTGCAAGGCTAACAAGGACGCTACCC 1290
Query 1183 TCGGGAAATACACCGGCGGGGCTTCAGGTGACTCGGCCGCCT-CTGAGAGCTTG-TATGA 1240
||||||||||||||||| ||||||| |||||||||||||| | | |||| |||| | ||
Sbjct 1291 TCGGGAAATACACCGGCTGGGCTTCTGGTGACTCGGCCGCTTTC-GAGAACTTGGT-TGT 1348
Query 1241 GAAAGGATACAAGTATTAGGAGCGTTTAATA-CGGGTGTC-GTCTTTTATACGGTTTGAA 1298
|| |||||||| ||| ||||| | ||| | | |||| || | |||| || ||||||||
Sbjct 1349 GATAGGATACAGGTACTAGGATCCTTTGAGAACGGGCGTTTGCCTTTGATGCGGTTTGAG 1408
Query 1299 TATATGTCAAATGTTTCGTGGGCGTTT-AACTGTTTAAATGTT 1340
|| || || ||||||||||| | |||| |||||||| ||||||
Sbjct 1409 TAGATATCTAATGTTTCGTGTGTGTTTTAACTGTTTGAATGTT 1451
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70079960820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5