BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492186 Length=1799 Score E Sequences producing significant alignments: (Bits) Value AT4G26270.1 | Symbols: PFK3 | phosphofructokinase 3 | chr4:1330... 1642 0.0 AT5G56630.1 | Symbols: PFK7 | phosphofructokinase 7 | chr5:2292... 893 0.0 AT4G29220.1 | Symbols: PFK1 | phosphofructokinase 1 | chr4:1440... 547 1e-154 > AT4G26270.1 | Symbols: PFK3 | phosphofructokinase 3 | chr4:13300795-13304347 REVERSE LENGTH=2086 Length=2086 Score = 1642 bits (889), Expect = 0.0 Identities = 1021/1082 (94%), Gaps = 19/1082 (2%) Strand=Plus/Plus Query 1 TTTACCGACTCCAATGGTCAAAA-TTCTCTAATCCTATAAAAAAGGGTCGCCTTGTTTTT 59 |||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||| Sbjct 92 TTTACCGACTACAATGGTCAAAATTTCTCTACTCCTATAAAAATGGGTCGCCTTGTTTTT 151 Query 60 GATCTACGGATTTGATTCA----------T--CTTTCTTCCTGATTTCGTATTCAATTTG 107 |||| |||||||||||||| | ||||||||||| |||||||||||||||| Sbjct 152 GATCAACGGATTTGATTCATCTTTCTTTTTACCTTTCTTCCTGCTTTCGTATTCAATTTG 211 Query 108 TCGTTGACGAGTTC-AAAGTCTCTATACGAGaaaaaaaaaaTTCGATTTTTAATTAAATT 166 | |||||| ||||| ||||||||||||| || ||||||||| ||| ||||| |||| ||| Sbjct 212 TAGTTGACCAGTTCAAAAGTCTCTATACCAG-AAAAAAAAA-TCG-TTTTTTATTATATT 268 Query 167 ATAAGAGTTTTCCCCTGAAGTTTGTTGTTCCTCTGTTTCGTGAG-TCGTTATGAGTACTG 225 |||||| |||||||||||| ||||||||||||||||||| | | ||||||||||||||| Sbjct 269 ATAAGACTTTTCCCCTGAA-ATTGTTGTTCCTCTGTTTCGAGCGTTCGTTATGAGTACTG 327 Query 226 TGGAAAGTAGCAAACCGAAGATCATCAATGGTTCTTGTGGTTATGTTCTAGAAGACGTTC 285 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || | Sbjct 328 TGGAGAGTAGCAAACCGAAGATCATCAATGGCTCTTGTGGTTATGTTCTAGAAGATGTAC 387 Query 286 CTCATCTCTCCGATTACCTTCCTGGTCTTCCTACTTATCCTAATCCATTGCAAGACAATC 345 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 CGCATCTCTCCGATTACCTTCCTGGTCTTCCTACTTATCCTAATCCATTGCAAGACAATC 447 Query 346 CAGCATACTCAGTGGTGAAGCAATACTTTGTTGATGCTGATGATAGTGTTCCTCAAAAGA 405 |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 448 CAGCTTACTCAGTGGTTAAGCAATACTTTGTTGATGCTGATGACAGTGTTCCTCAAAAGA 507 Query 406 TCGTTGTTCACAAGGATGGTCCAAGGGGGATTCATTTTAGACGAGCAGGGCCACGTCAAA 465 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 508 TCGTTGTTCACAAGGATGGTCCAAGGGGGATTCATTTTAGACGAGCCGGGCCACGTCAGA 567 Query 466 AGGTATACTTCGAATCTGATGAAGGGCATGCTTGCATAGTTACCTGTGGAGGTCTTTGTC 525 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 568 AGGTATACTTCGAATCTGATGAAGTGCATGCTTGCATAGTTACCTGTGGAGGTCTTTGTC 627 Query 526 CTGGCCTTAATACCGTGATTAGAGAAATAGTGAGCAGTCTATCTTATATGTATGGAGTGA 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 628 CTGGCCTTAATACCGTGATTAGAGAAATAGTGAGCAGTCTATCTTATATGTATGGAGTGA 687 Query 586 AGAGAATACTGGGAATAGATGGTGGATATAGAGGCTTTTATGCTAAGAATACTGTCTCCT 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 688 AGAGAATACTGGGAATAGATGGTGGATATAGAGGCTTTTATGCTAAGAATACTGTCTCCT 747 Query 646 TGGACTCTAAAGTCGTAAATGATATCCATAAGCGTGGAGGGACTATCCTCGGGACCTCGC 705 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 748 TGGACTCTAAAGTTGTAAATGATATCCATAAGCGTGGAGGGACTATCCTTGGGACCTCAC 807 Query 706 GAGGTGGTCACGATACCACAAAGATAGTTGACAGCATTCAAGATCGAGGAATCAATCAGG 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 GAGGTGGTCACGATACCACAAAGATAGTTGACAGCATTCAAGATCGAGGAATCAATCAGG 867 Query 766 TTTACATTATAGGAGGAGATGGAACTCAGCGAGGAGCATCTGTTATATTTGAGGAAATTA 825 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 868 TTTACATTATAGGAGGAGATGGAACACAGCGAGGAGCATCTGTCATATTTGAGGAAATTA 927 Query 826 GACGACGTGGCCTGAAAGTTGCAGTTGTTGGAATCCCGAAAACAATCGATAATGACATAC 885 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 928 GAAGACGTGGCCTGAAAGTTGCAGTTATTGGAATCCCGAAAACAATCGATAATGACATAC 987 Query 886 CTGTGATAGACAAATCTTTTGGGTTTGACACAGCTGTAGAAGAGGCTCAACGAGCTATTA 945 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 988 CTGTGATAGACAAATCTTTTGGGTTTGACACTGCTGTAGAAGAGGCTCAACGAGCTATTA 1047 Query 946 ACGCAGCACATGTGGAAGCGGAGAGTATAGAGAACGGTATTGGCGTTGTCAAGCTTATGG 1005 | ||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct 1048 ATGCAGCACATGTGGAAGCCGAGAGTATAGAGAATGGTATCGGAGTTGTCAAGCTTATGG 1107 Query 1006 GCCGCTACAGCGGTTTCATAGCGATGTACGCGACTCTAGCAAGCAGAGATGTGGACTGCT 1065 | ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct 1108 GTCGCTACAGCGGGTTCATAGCGATGTATGCCACTCTAGCAAGCAGAGATGTGGACTGCT 1167 Query 1066 GT 1067 || Sbjct 1168 GT 1169 Score = 1090 bits (590), Expect = 0.0 Identities = 699/749 (93%), Gaps = 18/749 (2%) Strand=Plus/Plus Query 1068 GAAGGTGGACTGTTTGAGTACATAGAGAAACGGCTCAAGGAGAGTGGTCATATGGTGCTT 1127 ||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct 1203 GAAGGCGGACTGTTTGAGTACATAGAGAAACGACTCAAGGAGAGCGGTCACATGGTTCTT 1262 Query 1128 GTGATTGCAGAAGGTGCAGGACAAGATCTAATGTCAAAGAGCATGGAATCTATGACACTC 1187 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1263 GTGATTGCAGAAGGTGCAGGACAAGATCTAATGTCGAAGAGCATGGAATCTATGACACTC 1322 Query 1188 AAGGATGCATCTGGTAACAAACTTCTCAAAGATGTTGGTCTTTGGTTGTCACAAAGCATC 1247 || ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| Sbjct 1323 AAAGATGCATCTGGTAACAAACTTCTTAAAGATGTTGGCCTTTGGCTGTCACAAAGCATC 1382 Query 1248 AAGGATCATTTTAATCAGAAGAAGATGGTGATGAACCTCAAGTACATAGATCCAACGTAC 1307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1383 AAGGATCATTTTAATCAGAAGAAGATGGTGATGAACCTCAAGTACATAGATCCAACATAC 1442 Query 1308 ATGATTCGGGCTATTCCTAGCAATGCGTCAGACAATGTTTATTGTACACTTCTGGCTCAG 1367 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1443 ATGATTCGAGCTGTTCCTAGCAATGCGTCAGACAATGTTTATTGTACACTTCTGGCTCAG 1502 Query 1368 AGTGCAGTGCACGGTGCAATGGCTGGATACACTGGCTATATCAGTGGTTTAGTGAACGGA 1427 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1503 AGTGCAGTGCACGGTGCAATGGCTGGATACACTGGCTATATCAGTGGTCTAGTGAACGGA 1562 Query 1428 AGACAAACCTACATACCCTTCTACAGGATAACGGAGAAACAGAACCATGTGGTGATCACA 1487 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1563 AGACAAACCTACATACCCTTTTACAGGATAACGGAGAAACAGAACCATGTGGTGATCACA 1622 Query 1488 GACAGGATGTGGGCAAGGCTACTATCTTCGACAAACCAGCCGAGTTTCTTGGGCCCCAAA 1547 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1623 GACAGGATGTGGGCAAGGCTACTCTCTTCGACAAACCAGCCGAGTTTCTTGGGCCCCAAA 1682 Query 1548 GATGTCTTTGATAATAAAGAGAAGCCGATGTCGGCTCTCCTGGACGATGGCAACTGCAAT 1607 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct 1683 GATGTCTTTGATAATAAAGAGAAACCGATGTCGGCTCTCCTTGACGATGGTAACTGCAAT 1742 Query 1608 GGCATGGTCGATGTTCCTCCAGTCACCAAAGAGATCAACAAGTGACCTGAACATAGGAAC 1667 ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1743 GGCGTGGTGGATGTTCCTCCAGTCACCAAAGAGATCACCAAGTGACCTGAACATAAGAAC 1802 Query 1668 AACGACATAA--GCTTTGGCGTTTTCAAATGGTGTTACAAGTTTTAGGTAG--GAGTAAA 1723 ||||||| || |||||| |||||||||| | ||||||| ||||||||||| ||||||| Sbjct 1803 AACGACAGAAAAGCTTTG-CGTTTTCAAAAGATGTTACATGTTTTAGGTAGTTGAGTAAA 1861 Query 1724 ATAAAAGGGTTTTGACTGTTTTACCCTTTTTGGCA---CAA--CA-T-------AGATGC 1770 |||| ||||| ||||| |||||||||||||||||| ||| || | |||||| Sbjct 1862 ATAATAGGGTGTTGACGGTTTTACCCTTTTTGGCATAACAAAGCAATCTTTGTTAGATGC 1921 Query 1771 CTCATGTTGTAATTTTCCACGTCCTGATG 1799 |||| |||||||||||||||||| ||||| Sbjct 1922 CTCACGTTGTAATTTTCCACGTCATGATG 1950 > AT5G56630.1 | Symbols: PFK7 | phosphofructokinase 7 | chr5:22923922-22926963 FORWARD LENGTH=2082 Length=2082 Score = 893 bits (483), Expect = 0.0 Identities = 723/840 (86%), Gaps = 12/840 (1%) Strand=Plus/Plus Query 230 AAGTAGCAAACCGAAGATCATCAATGGTTCTTGTGGTTATGTTCTAGAAGACGTTCCTCA 289 ||||| ||| |||||||| |||| ||| || |||||||| ||||| ||||||||||||| Sbjct 404 AAGTAACAAGCCGAAGATTGTCAACGGTCCTGGTGGTTATATTCTACAAGACGTTCCTCA 463 Query 290 TCTC-TCCGATTACCTTCCTGGTCTTCCTACTTATCCTAATCCATTGCAAGACAATCCAG 348 |||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 464 TCTCAT-TGATTACCTTCCTGATCTTCCTACTTATCCAAATCCATTGCAAGACAATCCAG 522 Query 349 CATACTCAGTGGTGAAGCAATACTTTGTTGATGCTGATGATAGTGTTCCTCAAAAGATCG 408 | ||||||||||| ||||||||||||||| |||||||||||||||| ||| | ||| | | Sbjct 523 CTTACTCAGTGGTTAAGCAATACTTTGTTCATGCTGATGATAGTGTCCCTGAGAAGGTTG 582 Query 409 TTGTTCACAAGGATGGTCCAAGGGGGA-TTCATTTTAGACGAGCAGGGCCACGTCAAAAG 467 ||||||||||||||||||||| | ||| | ||||| || || || || |||||||||||| Sbjct 583 TTGTTCACAAGGATGGTCCAA-GAGGAGTCCATTTCAGGCGTGCTGGTCCACGTCAAAAG 641 Query 468 GTATACTTCGAATCTGATGAAGGGCATGCTTGCATAGTTACCTGTGGAGGTCTTTGTCCT 527 || ||||| || ||||| |||| ||||||||| |||||||| ||||||||||| ||||| Sbjct 642 GTTTACTTTGAGTCTGACGAAGTGCATGCTTGTATAGTTACATGTGGAGGTCTCTGTCCC 701 Query 528 GGCCTTAATACCGTGATTAGAGAAATAGTGAGCAGTC-TATCTTATATGTATGGAGTGAA 586 || || |||||||||||||||||| | |||||||| | |||| || ||||||||||| || Sbjct 702 GGTCTCAATACCGTGATTAGAGAAGTTGTGAGCAG-CTTATCATACATGTATGGAGTAAA 760 Query 587 GAGAATACTGGGAATAGATGGTGGATATAGAGGCTTTTATGCTAAGAATACTGTCTCCTT 646 |||||| || ||||| ||||||||||| ||||| ||||| || ||||||||| || |||| Sbjct 761 GAGAATTCTTGGAATCGATGGTGGATACAGAGGATTTTACGCCAAGAATACTATCCCCTT 820 Query 647 GGACTCTAAAGTCGTAAATGATATCCATAAGCGTGGAGGGACTATCCTCGGGACCTCGCG 706 ||||||||||||| |||||||||||||| || ||||| || ||| | |||||||| | Sbjct 821 AAACTCTAAAGTCGTGAATGATATCCATAAACGCGGAGGAACAATCATTGGGACCTCAAG 880 Query 707 AGGTGGTCACGATACC-ACAAAGATAGTTGACAGCATTCAAGATCGAGGAATCAATCAGG 765 |||||| || |||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct 881 AGGTGGACATGATACCAAC-AAGATAGTTGATAGCATTCAAGATCGAGGAATCAATCAGG 939 Query 766 TTTACATTATAGGAGGAGATGGAACTCAGCGAGGAGCATCTGTTATATTTGAGGAAATTA 825 |||||||||| |||||||||||||| |||||||| || || || |||||||||||||||| Sbjct 940 TTTACATTATTGGAGGAGATGGAACCCAGCGAGGTGCTTCAGTAATATTTGAGGAAATTA 999 Query 826 GACGACGTGGCCTGAAAGTTGCAGTTGTTGGAATCCCGAAAACAATCGATAATGACATAC 885 || ||||| | || |||||||| || |||||||| || ||||| || |||||||| || | Sbjct 1000 GAAGACGTCGACTAAAAGTTGCTGTGGTTGGAATTCCAAAAACTATTGATAATGATATTC 1059 Query 886 CTGTGATAGACAAATCTTTTGGGTTTGACACAGCTGTAGAAGAGGCTCAACGAGCTATTA 945 | |||||||| |||||||||||||||||||| ||||| || || ||||||||||| |||| Sbjct 1060 CGGTGATAGATAAATCTTTTGGGTTTGACACTGCTGTGGAGGAAGCTCAACGAGCGATTA 1119 Query 946 ACGCAGCACATGTGGAAGCGGAGAGTA-TAGAGAACGGTATTGGCGTTGTCAAGCTTATG 1004 ||||||||||||| ||||| ||||||| | ||||| ||||| || |||||||||||||| Sbjct 1120 ACGCAGCACATGTTGAAGCCGAGAGTAAT-GAGAATGGTATCGGTTTTGTCAAGCTTATG 1178 Query 1005 GGCCGCTACAGCGGTTTCATAGCGATGTACGCGAC-TCTAGCAAGCAGAGATGTGGACTG 1063 || || |||||||| | |||||||||||| || || | |||| ||||||||||| ||||| Sbjct 1179 GGTCGTTACAGCGGGTACATAGCGATGTATGCTACAT-TAGCCAGCAGAGATGTTGACTG 1237 > AT4G29220.1 | Symbols: PFK1 | phosphofructokinase 1 | chr4:14403347-14406592 REVERSE LENGTH=2068 Length=2068 Score = 547 bits (296), Expect = 1e-154 Identities = 646/814 (79%), Gaps = 28/814 (3%) Strand=Plus/Plus Query 264 GGTTATGTTCTAGAAGACGTTCCTCATCTCTCCGATTACCTTCCTGGTCTTCCTACTTAT 323 |||||| |||| ||||||||||||||| ||||||| || |||||| || |||||| ||| Sbjct 424 GGTTATATTCTTGAAGACGTTCCTCATTTCTCCGACGACTTTCCTGATCATCCTACATAT 483 Query 324 CCTAATCCATTGCAAGACAATCCAGCATACTCAGTGGTGAAGCAATACTTTGTTGATGCT 383 || |||||||| ||||||||| |||| ||||| || || ||||| || ||||| |||| Sbjct 484 CCAAATCCATTACAAGACAATGCAGCTTACTCTGTTGTTAAGCAGTATTTTGTCGATGAG 543 Query 384 GATGATA-GTGTTCCTCAAAAGATCGTTGTTCA-CAAGGATGGTCCAAGGGGGATTCATT 441 ||||| | | ||||||||||| || || ||||| | ||| |||| ||||| | |||| Sbjct 544 GATGACACG-GTTCCTCAAAAAATAGTAGTTCATC-CTGATAGTCCTAGGGGAACGCATT 601 Query 442 TTAGACGAGCAGGGCCACGTCAAAAGGTATACTTCGAATCTGATGAAGGGCATGCTTGCA 501 | | || ||||| |||||||||| ||| ||||| || || ||||| | | |||||||| Sbjct 602 TCCGTCGTGCAGGACCACGTCAAAGGGTTTACTTTGAGTCGGATGATGTTCTTGCTTGCA 661 Query 502 TAGTTACCTGTGGAGGTCTTTGTCCTGGCCTTAATACCGTGATTAGAGAAATAG--TGAG 559 | ||||| ||||| ||||| ||||| || |||||||| ||||| ||||| |||| || | Sbjct 662 TTGTTACATGTGGCGGTCTATGTCCCGGGCTTAATACTGTGATCAGAGAGATAGTTTGTG 721 Query 560 CAGTCTATCTTATATGTATGGAGTGAAGAGAATACTGGGAATAGATGGTGGATATAGAGG 619 | | |||||||||||||||| || |||||||| || || || ||||| || || ||||| Sbjct 722 GA-T-TATCTTATATGTATGGTGTCAAGAGAATCCTTGGCATTGATGGAGGTTACAGAGG 779 Query 620 CTTTTATGCTAAG-AATACTGTCTC-CTTGGACTCTAAAGTC-GTAAATGATATCCATAA 676 ||||| || || || || || | ||||||| |||| | || |||||||||||| | Sbjct 780 ATTTTACGC-GAGAAACACAATC-CATTTGGACT-TAAAAACAGTGAATGATATCCAT-A 835 Query 677 G-CGTGGAGGGACTATCCTCGGGACCTCGCGAGGTGGTCACGATACCACAAAGATAGTTG 735 | | ||||| |||||||||||||| || |||| |||||| | ||||| |||||||| | Sbjct 836 GAAGCGGAGGAACTATCCTCGGGACTTCAAGAGGCGGTCACAACACCACCAAGATAGTAG 895 Query 736 ACAGCATTCAAGATCGAGGAATCAATCAGGTTTACATTATAGGAGGAGATGGAACTCAGC 795 | || ||||||||||| || || || |||||||| || || || ||||||||| | ||| Sbjct 896 ATAGTATTCAAGATCGCGGGATTAACCAGGTTTATATAATCGGTGGAGATGGATCACAGA 955 Query 796 GAGGAGCATCTGTTATATTTGAGGAAATTA-GACGACG-TGGCCTGAAAGTTGCAGTTGT 853 ||||||| ||| |||||| ||||| |||| || ||| | || |||||||| |||| Sbjct 956 AAGGAGCAGCTGCTATATTCGAGGAGATTAGGA-AACGCAAG-CTTAAAGTTGCGGTTGC 1013 Query 854 TGGAATCCCGAAAACAATCGATAATGACATACCTGTGATAGACAAATCTTTTGGGTTTGA 913 ||||||||||||||||| || |||||||| ||| | || || | |||||| |||||||| Sbjct 1014 CGGAATCCCGAAAACAATTGACAATGACATTCCTATTATCGATAGATCTTTCGGGTTTGA 1073 Query 914 CACAGCTGTAGAAGAGGCTCAACGAGCTATTAACGCAGCACATGTGGAAGCGGAGA-G-T 971 |||||||||||||||||||||||| ||||| || ||||||||||| ||||| | | | | Sbjct 1074 CACAGCTGTAGAAGAGGCTCAACGTGCTATCAATGCAGCACATGTCGAAGCT-ACAAGCT 1132 Query 972 ATAGAGAACGGTATTGG-CGTTGTCAAGCTTA-TGGGCCGCTACAGCGGTTTCATAGCGA 1029 | ||||| |||||||| | |||| ||| ||| |||| || |||||||| ||||| || | Sbjct 1133 TT-GAGAATGGTATTGGTC-TTGTGAAG-TTAATGGGACGGTACAGCGGATTCATTGCAA 1189 Query 1030 TGTACGCGACTCTAGCAAGCAGAGATGTGGACTG 1063 || | || |||||||| ||| ||||||||||||| Sbjct 1190 TGCATGCCACTCTAGCCAGCCGAGATGTGGACTG 1223 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89005566285 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5