BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg492227

Length=1301
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G25900.1 | Symbols:  | Galactose mutarotase-like superfamily...  1888    0.0  


> AT4G25900.1 | Symbols:  | Galactose mutarotase-like superfamily 
protein | chr4:13161346-13163636 FORWARD LENGTH=1337
Length=1337

 Score = 1888 bits (1022),  Expect = 0.0
 Identities = 1189/1267 (94%), Gaps = 22/1267 (2%)
 Strand=Plus/Plus

Query  2     TAAGTTTCATTTCCTGTTTTTAGGCTCACTCGTTGACTTTTTTCAATTTCTTTCCTTTGG  61
             ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| 
Sbjct  22    TAAGTTTCATTTCCTGTTTTTAGGCTCACTCGTGGACTTTTTTTAATTTCTTTCCTTTGC  81

Query  62    CATATTTATAAAATAAGA-AGAGAG-AA-AATCTTCAATAATTTTCAACAAGCAAAGGAG  118
             |||||||||||||||| | |||||| || ||| ||||||||||||||||||||     | 
Sbjct  82    CATATTTATAAAATAAAAGAGAGAGAAAGAATTTTCAATAATTTTCAACAAGC-----A-  135

Query  119   AGACGACTCATGATGGGGAATAAGGGAAATCTCGGATTTGTGATCTTCTTATGGGCTCTG  178
             | | |  ||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct  136   A-A-G-TTCATGATGGGGAATAAGCGAAATCTCGGATTTGTGATCTTCTTCTGGGCTCTG  192

Query  179   GTGGTTGCAGTAGTAGCCACGGCCATCGAGCATCGTCCCATTGAGAGGACTAAAGGCATT  238
             ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | 
Sbjct  193   GTGGTTGCAGTAGTAGCCACGGCCATCGAGCATCGTCGCAATGAGAGGACTAAAGGCGTC  252

Query  239   AATGGTCTTGACAAGATCATCATCCGCGACCGCCGTGGCCGATCTGCTGAGGTTTACTTG  298
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  253   AATGGTCTTGACAAGATCATCATCCGCGACCGTCGTGGCCGATCTGCTGAGGTTTACTTG  312

Query  299   TATGGAGGTCAAGTGAGTTCTTGGAAGAATGAGAAGGGAGAGGAGTTACTTGTTATGAGT  358
             |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct  313   TATGGAGGTCAAGTCAGTTCTTGGAAAAATGAGAATGGAGAGGAGTTACTTGTTATGAGT  372

Query  359   AGCAAGGCTATATTTCAGCCTCCAACACCGATTCGTGGGGGAATTCCAGTATTGTTTCCG  418
             |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  373   AGCAAGGCTATATTCCAGCCTCCAACACCGATTCGTGGAGGAATTCCAGTATTGTTTCCG  432

Query  419   CAATATAGTAACACCGGTCCACTTCCCTCACATGGATTTGCAAGGCAGAGGTTCTGGGAA  478
             ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| 
Sbjct  433   CAATACAGTAACACCGGTCCACTTCCCTCACATGGATTTGTAAGACAGAGGTTCTGGGAG  492

Query  479   GTTGAGGCTAAACCACCTCCTTTGCCATCAATTTCTTCTGCTCATGTTGACCTGATCCTA  538
             |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct  493   GTTGAGACTAAACCACCTCCTTTGCCATCACTTTCTACTGCTCATGTTGACCTGATCGTA  552

Query  539   AAATCATCCAATGATGATTTGAAGATCTGGCCTCATAAGTTTGAGTACCGACTGAGAGTA  598
             | |||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||
Sbjct  553   AGATCATCCAATGAGGATTTGAAGATCTGGCCGCATAAGTTTGAGTATAGACTGAGAGTA  612

Query  599   GCATTGGGACATGATGGAGATTTGACGTTGACATCTCGTGTTAAGAATTCTGATACTAAA  658
             ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||
Sbjct  613   GCATTGGGACATGATGGAGATTTGACGTTAACATCTCGTGTTAAGAATACTGATACAAAA  672

Query  659   CCATTTAACTTCACATTTGCTCTTCACCCCTATTTCGCTGTTTCCAATATCAGTGAAGTC  718
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct  673   CCATTTAACTTCACATTTGCTCTTCACCCCTACTTCGCTGTTTCCAATATCAGTGAAATC  732

Query  719   CACGTCGAAGGATTACACAACTTGGATTATCTTGACCAACAAAAGAACAGAACACGTTTC  778
             || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  733   CATGTCGAAGGATTACACAACTTGGATTACCTTGACCAACAAAAGAACAGAACACGTTTC  792

Query  779   ACTGATCATGACAAAGTTATAACTTTCAATGCTCAACTTGACAGGTTGTACCTAAGCACT  838
             ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793   ACTGATCATGAGAAGGTTATAACTTTCAATGCTCAACTTGACAGGTTGTACCTAAGCACT  852

Query  839   CCAAATAAACTAAGAATCGTAGACCACAAGAAAAAGAAGACTATTGTTGTACACAAGGAG  898
             ||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct  853   CCAGATCAACTAAGAATCGTGGACCATAAGAAAAAGAAGACTATTGTTGTACACAAGGAG  912

Query  899   GGACAAGTTGATGCCGTGGTGTGGAATCCATGGGACAAGAAAGTGTCAGATTTGGGAGTT  958
             ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct  913   GGACAAGTTGATGCCGTGGTGTGGAATCCATGGGATAAGAAAGTATCCGATTTGGGAGTT  972

Query  959   GAAGACTATAAGCGTTTTGTAACGGTGGAAAGCGCGGCTGTCGAGAAACCGATCACAGTG  1018
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  973   GAAGACTATAAGCGTTTTGTAACGGTGGAAAGCGCGGCTGTCGCGAAACCGATCACAGTG  1032

Query  1019  AACCCCGGCAAAGAATGGAAAGGAATACTCCAAGTATCTGTGGTTCCTTCAAATTGGAAA  1078
             |||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||
Sbjct  1033  AACCCCGGCAAAGAATGGAAAGGAATACTCCATGTTTCTGTGGTTCCATCAAATCGGAAA  1092

Query  1079  GCTTGAACCTA-AAAAGTCTTGCATTCATCATCCTCATC-TT-aaaaaaaaaaaCTTAAA  1135
             |||||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct  1093  GCTTGACCCTATAAAAGTCTTGCATTCATCATCCTCATCCTTTAAAAAAAAAAACTTAAA  1152

Query  1136  AACTGTCTTTATTAAAATATATACTTAATGTTCCCGAGAGACATCACATGGTGAACACAA  1195
             | |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||
Sbjct  1153  A-CTGTCTTTATTAAAGTATA--CTTAATGTTCCCGAGAGACATCACATGGTGAACACAA  1209

Query  1196  AGTTAGTTGGGTTCCAAACTGGACTCT-GACCAGTTTCATTGTTTTGTAA-T--AGTATT  1251
             ||||||||||||||||||||||||||| ||||||||| |||||||||||| |  || |||
Sbjct  1210  AGTTAGTTGGGTTCCAAACTGGACTCTTGACCAGTTTTATTGTTTTGTAACTTTAGCATT  1269

Query  1252  CATGAAT  1258
             |||||||
Sbjct  1270  CATGAAT  1276



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 64005694875


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5