BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492332 Length=2287 Score E Sequences producing significant alignments: (Bits) Value AT4G25070.2 | Symbols: | unknown protein; EXPRESSED IN: cultur... 2627 0.0 > AT4G25070.2 | Symbols: | unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:12872482-12876734 FORWARD LENGTH=2570 Length=2570 Score = 2627 bits (1422), Expect = 0.0 Identities = 1693/1819 (93%), Gaps = 38/1819 (2%) Strand=Plus/Plus Query 491 ACGACGGTGATGAAATTATAGCCGATGTGCGCCGGATTCCAGTGGAGATTTCTGGAAGGA 550 ||||| |||||||||||| || ||||| | ||||| ||||||||||| || || || Sbjct 563 ACGACAGTGATGAAATTACAGAGGATGTTCCCCGGAATCCAGTGGAGA-TT-AGG--GGT 618 Query 551 ATGCT-AGGGGTCGGAAAGAAGCTCCCACGGTGAAA-CC--AGTCGTTAATACGCCTAAA 606 | | | | | | |||| |||||| |||| ||| || ||||||| | || ||||| Sbjct 619 CCGGTCA-GAG--GAAAAGTAGCTCCGGCGGTCAAACCCGTAGTCGTTCTTCCGACTAAA 675 Query 607 TTTGACGATGAATACGACAGTGATGAAATTACAGCGGATGTTCCCCGGAATCCAGTGGAG 666 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 676 TTTGACGATGAATACGACAGTGATGAAATTACAGAGGATGTTCCCCGGAATCCAGTGGAG 735 Query 667 ATTA-GGGTCCCGGTCAGAGGGAAAGTAGCTCCGGCGGTGAAACCC---GTCGTTCTTCC 722 |||| |||| || |||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct 736 ATTAGGGGTACC-GTCAGAGGAAAAGTAGCTCCGGCGGTCAAACCCGTAGTCGTTCTTCC 794 Query 723 GACTAGATTTGACGATGAATATGATAGTGATGAAATTACAGCCGAGGTGTCCCGGAATCC 782 ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 795 GACTAAATTTGACGATGAATACGATAGTGATGAAATTACAGCCGATGTGTCCCGGAATCC 854 Query 783 AGTGGGGAGTAAAGG-TCCGGTCAGAGGGAAAG-TAGCTCCGGCGGTGAAACCCGTCGTT 840 ||||| | || | || ||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct 855 AGTGGAG-GTTAGGGATCCAGTCAGAGGG-AAGTTAGCTCCGGTGGTGAAACCCGTCGTT 912 Query 841 CTTCCGACTAAATATGACGATGAACT-CGACAGTGACGAAATTGCGGCCGATGTGC-CTC 898 ||||||||||||| |||||||||| | ||| |||||||||||||| || ||||| | | | Sbjct 913 CTTCCGACTAAATTTGACGATGAA-TACGATAGTGACGAAATTGCAGCTGATGT-CTCCC 970 Query 899 GGAA-GCAAGTGGAGATTCCTCAAAAGAATGGAAAAG-GTGCACTCAGGGTTAGAGTTCC 956 |||| || |||||||||||||||||||||| |||||| || |||||||||||||||| || Sbjct 971 GGAAGGC-AGTGGAGATTCCTCAAAAGAAT-GAAAAGAGTACACTCAGGGTTAGAGTCCC 1028 Query 957 GGCATATTCACGTCGGAATCCGTTGGAGGAATTTGAGCAGAACGGAGAAGAAAAGCAAAA 1016 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1029 GGCATATTCACGTCGGAATCCGTTGGAGGAATTTGAGCAGAACGGAGAAGACAAGCAAAA 1088 Query 1017 TGTTCAGTTTGATGTGCCTGCAAAACAATCGGAAGCTCAATTAAAGTATAAGAAAAGGTT 1076 |||||| | |||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 1089 TGTTCAATGTGATGTGCCTGCTAAACAATCGGAAGCTCAATTAAAGTATAAGAAAA-GTT 1147 Query 1077 TCA--T---A--CTGCAGATATTTTAGCACCTAATAACTCTAACCAGCAGGAAGATGATC 1129 ||| | | ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 TCAGGTACCATCCTGCAAATATTTTAGCACCTAATAACTCTAACCAGCAGGAAGATGATC 1207 Query 1130 GAGAAGCTTCAGCCCTGCGTGATGAATTAGATATGCTTCAAGAAGAAAACGATAATATTA 1189 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 1208 GAGAAGCTTCAGCCCTGCGTGATGAATTAGACATGCTTCAAGAAGAAAACGATAATATAA 1267 Query 1190 TGGATAAACTTCAGCGCGCTGAAGAAAGACGCGAAGCTGCAGAAACAAGGGCTAAAGAGC 1249 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1268 TGGATAAGCTTCAGCGCGCTGAAGAAAGACGCGAAGCTGCAGAAGCAAGGGCTAAAGAGC 1327 Query 1250 TCGAGAAACAGATTGCTTCTCTAGGTGAAGGAGCAAATTTTGATGTCAAGCTCTTGAAGA 1309 | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1328 TTGAGAAACAGGTTGCTTCTCTAGGTGAAGGAGCAAATTTTGATGTCAAGCTCTTGAAGA 1387 Query 1310 GGAAAGAAGCAGCACTGCGTCAAAGAGAGGCAGCATTAAGGGCTGCTGAACAGAAAAGAG 1369 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1388 GGAAAGAAGCAGCATTGCGTCAAAGAGAGGCAGCATTAAGGGCTGCTGAACAGAAAAGAG 1447 Query 1370 ATGGGATAAATAGAGAAAGTAATGCACTTAGTTCAGAATTTCAGAGTTTGAAAGATGAAG 1429 |||| | |||||| |||| |||||| ||||| ||||||||||||||||| |||||||||| Sbjct 1448 ATGGAAGAAATAGGGAAACTAATGCCCTTAGCTCAGAATTTCAGAGTTTAAAAGATGAAG 1507 Query 1430 CAGAGAAAGCCATGGAACAGCTCCAGGAGGTTGAAGCTGAAACAAAGTCTCTTCGGACAA 1489 |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1508 CAGAGAAATCCACGGAACAGCTCCAGGAGGTTGAAGCTGAAATAAAGTCTCTTCGGACAA 1567 Query 1490 TGATACATAGAACGATTTTGACTCAAGAAGAAATGGAGGAAGTTGTTCTTAAGAGATGCT 1549 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1568 TGATACATAGAACGATTTTGAGTCAAGAAGAAATGGAGGAAGTTGTTCTAAAGAGATGCT 1627 Query 1550 GGCTTGCTCGATACTGGGAACTAGCTGTTCAACATGGAATATGTGAAGATATAGCCACAT 1609 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1628 GGCTTGCTCGCTACTGGGAATTAGCTGTTCAACATGGAATATGTGAAGATATATCCACAT 1687 Query 1610 CAAGATATGAACATTGGTCAGCTTTAGCTCCTCTTCCCTCTGAAGTTGTCCTTTCCGCTG 1669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1688 CAAGATATGAACATTGGTCAGCTTTAGCTCCTCTTCCCTCTGAAGTTGTCCTTTCCGCTG 1747 Query 1670 CCCAAAAGTCTGAAGACTCCTGGCAGACAGGTGGTAGCGATCGCACTTGGAGCAAAGTCG 1729 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1748 CCCAAAAGTCTGAAGATTCCTGGCAGACAGGTGGTAGCGATCGCACTTGGAGCAAAGTCA 1807 Query 1730 TCAGTAATTTCAGTGATGTGAATGGAGAAGGAAACATTGAGAGTATGCTTGCTGTTGAAA 1789 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 1808 TCAGTAATTTCAGTGATTTGAATGGAGAAGGGAACATTGAGAGTATGCTTGCTGTTGAAA 1867 Query 1790 CGGGATTACGAGAGATAGCATCCTTGAAGGTTGAGGATGCTGTAATGCTTGCACTTGCCC 1849 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1868 CGGGATTACGAGAGATAGCATCCTTGAAGGTTGAGGATGCTGTAATGCTTGCACTTTCCC 1927 Query 1850 GGTATAGACAAACAAATGTGGGC-CGACAAGCCATCACTGATCCCAGGGTGCAAGGGGAA 1908 |||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct 1928 GGTATAGACAGACAAATGT-GGCTCGACAAGCCGTCACTGATCCCAGGGTGCAAGGGGAA 1986 Query 1909 CCTAAGTTCTCTGAAACATTTGAGTTGAGTCATGATGAGCAACAAGATATTCTCTTTAAA 1968 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1987 CCTAAGTTCTCCGAAACATTTGAGTTGAGTCATGATGAGCAACAAGATATTCTCTTTAAA 2046 Query 1969 GAGGCATGGCTGCTGTATTTCTGGAAAAGAGCTAAAATTCATGGCGTGGAAAGTGATATA 2028 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2047 GAGGCATGGCTGCTGTATTTCTGGAAAAGAGCTAAAATTCATGGCGTGGAAAGTGATATT 2106 Query 2029 GCGGAAGAGCGTCTTCAGTTCTGGATCAACCGACTCGGGCAACATTCATCTTCACATGAT 2088 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2107 GCGGAAGAGCGTCTTCAGTTCTGGATCAACCGACTCGGGCAACATTCATCTTCACATGAT 2166 Query 2089 GCAATTGATGTGGAAAGAGGAATGAGGGAGCTAAGGAAGCTTGGAATAGAACAACAATTG 2148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2167 GCAATTGATGTGGAAAGAGGAATGAGGGAGCTAAGGAAGCTTGGAATAGAACAACAATTG 2226 Query 2149 TGGGAAACATCTCGTAAAGAACTCATAGACTCCTCTTTTCTTCCTTCTTATTCCGTTTCT 2208 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2227 TGGGAAACATCTCGTAAAGAACTCATCGACTCCTCTTTTCTTCCTTCTTATTCCGTTTCT 2286 Query 2209 GACTACAATGACGAATAACCACCTCTAATGTCTTCTTTGCCTCCAATTTCCTACATTCAC 2268 |||||||||||||| | |||||||||| | || |||||||||||||||| || |||||| Sbjct 2287 GACTACAATGACGAGTGACCACCTCTACTCTCCTCTTTGCCTCCAATTTTCTTTATTCAC 2346 Query 2269 TACACACGCTAACATAAAC 2287 ||||||||| |||||||| Sbjct 2347 GACACACGCTCACATAAAC 2365 Score = 1044 bits (565), Expect = 0.0 Identities = 788/889 (89%), Gaps = 41/889 (5%) Strand=Plus/Plus Query 37 ATGGCGAGGAGACCAGGAAGCTCGGCTTCTTCTTCACCCACGATGTCTCCGTCGCATATG 96 |||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||| | Sbjct 1 ATGGCGCGGAGACCAGGAACCTCCGCTTCTTCTTCACCCACGATGTCTCCGTCTCATCGG 60 Query 97 ATGAACAGTGGCGGAGGAGGAATCTCCGGCAAAAGCACTCTCCGGAAGCAAAACGCCGCC 156 |||| | | ||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 61 ATGAGCGGCGGCGGAGGAGGAATCTCCGGCAAAAGCACGCTCCGGAAACAAAACGCCGCC 120 Query 157 GAGCTGCTCGCGAAAGTCATGGAGAAGCGCGACTATGATTATGATTACGACGATGAAGAC 216 ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 121 GAGCTACTCGCGAAGGTCATGGAGAAGCGCGAATATGATTATGATTACGACGATGAAGAT 180 Query 217 GGAGGCGAAGATCTGTACCAGGTACATCTTCCGCCTCTTACTCAGTCTCGAGGACGAGAT 276 ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 181 GGAGGTGAAGATCTGTACCAGGTACATCTTCCTCCTCTTACTCAGTCTCGAAGACGAGAT 240 Query 277 GATAAGCGTATTGGTAAGGGTTCAGTCAACGAGAAAAAGGCTCCGGCGAAGAAACCGGTC 336 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 241 GATAAGCGTATTGGTAAGGGCTCAGTCAACGAGAAAAAGGCTCCGGCGAAGAAACCGATC 300 Query 337 ATACTACCGCCGCCTAAATTTGACGATGAATCCGAAGATGATGAAATTAGAGCTGATGTT 396 ||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||| || || Sbjct 301 ATACTTCCGGCGCCTAAATTTGATGATGAATCCGAAGATGATGAAACTAGAGCTAATTTT 360 Query 397 C-CCCGGAATCCAGTGATAGTTCCTAAAAAGAATGCTAGGGATCCGAGAAGAGCTCCGGC 455 | ||| |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct 361 CGCCCA-AATCCAGTGATAATTCCTAAAAAGAATGCTAGGGAACCGAGAAAAGCTCCGGC 419 Query 456 GACGAAGCCGGTCGTACTTCCGCCGCCTAAATTTGACGACGGTGATGAAATTATAGCCGA 515 |||||| |||||||| |||||||| ||||||||| | | | | | | Sbjct 420 GACGAAACCGGTCGTTCTTCCGCCACCTAAATTTT-C--C----A--A--T----G---- 460 Query 516 TGTGCGCCGGATTCCAGTGGAGATTTCTGGAAGGAATGCTAGGGGT-CGGAAAGAAGCTC 574 || |||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 461 TG--CGCCGGATTCCAGTGGAGATTTCTGGAAGGAATGCTAGGGGTTCG-AAAGAAGCTT 517 Query 575 CCACGGTGAAACCAGTCGTTAATACGCCTAAATTTGACGATGAATACGACAGTGATGAAA 634 | |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 518 CGACGGTGAAACAAGTCGTTAGTACGCCTAAATTTGACGATGAATACGACAGTGATGAAA 577 Query 635 TTACAGCGGATGTTCCCCGGAATCCAGTGGAGATTAGGG-TCCCGGTCAGAGGGAAAGTA 693 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||| |||||| Sbjct 578 TTACAGAGGATGTTCCCCGGAATCCAGTGGAGATTAGGGGTCC-GGTCAGAGGAAAAGTA 636 Query 694 GCTCCGGCGGTGAAACCCGT---CGTTCTTCCGACTAGATTTGACGATGAATATGATAGT 750 ||||||||||| |||||||| |||||||||||||| ||||||||||||||| || ||| Sbjct 637 GCTCCGGCGGTCAAACCCGTAGTCGTTCTTCCGACTAAATTTGACGATGAATACGACAGT 696 Query 751 GATGAAATTACAGCCGAGGTGTCCC-GGAATCCAGTGGGGAGTAAAGGT-CCGGTCAGAG 808 ||||||||||||| || || |||| |||||||||||| || || ||| ||| |||||| Sbjct 697 GATGAAATTACAGAGGATGT-TCCCCGGAATCCAGTGGAGATTAGGGGTACCG-TCAGAG 754 Query 809 GGAAAGTAGCTCCGGCGGTGAAACCCGT---CGTTCTTCCGACTAAATATGACGATGAAC 865 | ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 755 GAAAAGTAGCTCCGGCGGTCAAACCCGTAGTCGTTCTTCCGACTAAATTTGACGATGAA- 813 Query 866 T-CGACAGTGACGAAATTGCGGCCGATGTG-CCTCGGAAGCAAGTGGAG 912 | ||| ||||| |||||| | ||||||||| || ||||| | ||||||| Sbjct 814 TACGATAGTGATGAAATTACAGCCGATGTGTCC-CGGAATCCAGTGGAG 861 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113503432245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5