BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492357 Length=1630 Score E Sequences producing significant alignments: (Bits) Value AT4G24810.2 | Symbols: | Protein kinase superfamily protein | ... 2479 0.0 AT5G50330.1 | Symbols: | Protein kinase superfamily protein | ... 1277 0.0 > AT4G24810.2 | Symbols: | Protein kinase superfamily protein | chr4:12786627-12789713 REVERSE LENGTH=1725 Length=1725 Score = 2479 bits (1342), Expect = 0.0 Identities = 1527/1615 (95%), Gaps = 18/1615 (1%) Strand=Plus/Plus Query 29 AATGCATGCGATCGATTTCAAAGAGATTCAGGAGAAGCTCTCTGATGGATTCCGGCCTTG 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 AATGCATGCGATCGATTTCAAAGAGATTCAGGAGAAGCTCTCTGATGGATTCCGGCCTTG 174 Query 89 GCAACGATCGTTTCAGTTCTGGGCTCGTGCCACTGACATCTACACTGGATACAAGGTATT 148 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 175 GCAACGATCGTTTCAGTTCTGGGCTCGTGCCACTGATATCTACACCGGATACAAGGTATT 234 Query 149 TCAACTTCGTATGAACTTCGTTAAGGATGTCAATAAGCACGAGGAAATGTGGGAGAGACA 208 ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct 235 TCAACTTCGTATGAACTTCGTCAAGGATGTTAATAAGCACGAGGAGATGTGGGAGAGACA 294 Query 209 ACATGAACTTGCTGCTC-TCAAAATTTATTCTATGTGCTCTGACCTTGGTGGTTTCTTCC 267 ||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct 295 ACATGAACTTGCTGCTCAT-AAAGTTTATTCTATGTGCTCTGACCTTGGTGGTTTCTTCC 353 Query 268 TTAAGATTGCACAAATTCTAGGTAAACCTGACTTGGCTCCAGCTGCGTGGGTTAGAAAAC 327 |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct 354 TTAAGATTGCACAAATTCTAGGGAAACCTGACTTGGCTCCAGCTGCTTGGGTGAGAAAAC 413 Query 328 TCGTCACTTTGTGTGATCATGCTCCTGCCACATCATTTGATGCCATTCGAGTTGTCCTTG 387 ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||| | Sbjct 414 TCGTCACTTTGTGTGATCAAGCTCCTGCCACACCATTTGATGCCGTTCGAGTTGTCCTGG 473 Query 388 AGAAAGAGTTAGGTAAAAGCCTCGAAGATGTGTTTGAAACATTTGATGAGAAGCCTCTTG 447 |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct 474 AGAAAGAGTTAGGTAAAAGCATCGAACAAGTGTTTGAAACATTTGATGAGAAGCCTCTTG 533 Query 448 GCTCTGCTTCTATTGCTCAGGTACACCGAGCAAGAGTAAAAGGTGACAAGAGGGATGTTG 507 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 534 GCTCTGCTTCTATTGCTCAGGTACACCGAGCAAGAGTAAAGGGTGACAAGAGGGATGTTG 593 Query 508 TTGTAAAGGTCCAACATCCTGGCGTTGAGAAATTGATGATGGTAGATATCAGAAACTTGC 567 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 594 TTGTAAAGGTCCAACATCCTGGCGTTGAGAAGTTGATGATGGTTGATATCAGAAACTTGC 653 Query 568 AAGTATTTGCATTATACATGCAGAAAACTGATATTAAATTTGACTTGTTCTCCATGACAA 627 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 654 AAATATTTGCATTATACATGCAGAAAACTGATATCAAATTTGACTTGTTCTCCATGACAA 713 Query 628 AAGAAATCGAGAAGCAGATTGGGTATGAATTCGACTTTAAAAGGGAGGCCAATGCTATGG 687 | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 714 AGGAAATAGAGAAGCAGATTGGGTATGAATTCGACTTTAAAAGGGAGGCCAATGCAATGG 773 Query 688 AAAAGATCCGACGTTTTCTTTATGATAACAATAGAAAGAGTCCTGTCCTGGTTCCCAGGG 747 | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 774 AGAAGATCCGACGTTTTCTATATGATAACAATAGAAAGAGTCCTGTTCTGGTTCCCAGGG 833 Query 748 TGCTTCCAAATTTGGTGACTAGAAAGGTACTGGTGATGG-ATTACATGAACGGAATCCCA 806 || |||||||||||||||| || ||||| ||||| |||| ||| ||||||||||||||| Sbjct 834 TGTTTCCAAATTTGGTGACCAGGAAGGTTCTGGTTATGGAATT-CATGAACGGAATCCCG 892 Query 807 ATCTTGAGCCTCGGTGATGAGATGGCCAAAAGAGGGATAAATCCTCATGGTAAAATGGCA 866 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 893 ATCTTGAGCCTTGGTGATGAGATGGCAAAAAGAGGGATAAATCCTCATGGTAAAATGGCA 952 Query 867 GAGGCGGCAAAATTCAATATACTAAACAGTTTGTCCCAAGCATATGGCCAAATGATACTG 926 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 953 GAGGCAGCAAAATTCAATATACTACACAGTTTGTCCCAAGCATATGGCCAAATGATACTG 1012 Query 927 AAGAGTGGTTTCTTTCATGCGGATCCACATCCTGGGAATATCTTGATTTCTAAAGGTTCA 986 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1013 AAGAGTGGTTTCTTTCATGCGGATCCACATCCTGGGAATATCTTGATTGGTAAAGGTTCA 1072 Query 987 GAGGTTGCACTGTTGGACTATGGACAAGTGAAGGAACTCCCTGACCACCTGAGACTTGGT 1046 |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 1073 GAGGTTGCACTGCTGGACTATGGTCAAGTGAAAGAACTCCCTGACCACCTGAGACTTGGT 1132 Query 1047 TATGCAAATTTGGTAATTGCCATCGCTGATAACAATGCCTCATTGGCATTACAGAGCTTT 1106 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1133 TATGCAAATTTGGTAATTGCCATCGCTGATAACAATGCGTCATTGGCGTTACAGAGCTTT 1192 Query 1107 AGGGAACTTGGCATAGCTACAGTCGCCAAGTGTAAGAATGAGCAACAAGAGCTTCTCCAG 1166 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1193 AGGGAACTTGGTATAGCTACAGTAGCCAAGTGTAAGAATGAGCAACAAGAGCTTCTCCAG 1252 Query 1167 TTAGCAAAAACAATGTTCGACACAGAGATGCCTCCTGGTACGACAACTCTGCAACCTTTC 1226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1253 TTAGCAAAAACAATGTTCGACACAGAGATGCCTCCTGGTACGACAACTCTGCAACCTTTC 1312 Query 1227 TCAGTTGACTCTTCGATCAAAAAGATTTCGGTTGAGGCATTTCCAGAGGAGCTTTTCTCT 1286 |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1313 TCAGAAGACTCTTCGATCAAAAAGATTTCGGTTGAGGCATTTCCAGAGGAACTCTTCTCT 1372 Query 1287 GTTCTTCGCACGGTAGTTCTGTTAAGAGGACTCAGCGTAGGGATAGGGATTAATTACTCC 1346 ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1373 GTTCTTCGCACAGTAGTTCTGTTAAGAGGACTCAGCGTAGGGATTGGCATTAATTACTCC 1432 Query 1347 TGCGCTCAACACTGGAGGTCTATGGCAGAAGAGGCTTTGCTTGCATCTGGAAGACTCTCA 1406 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1433 TGCGCTCAACACTGGAGGGCTATGGCAGAAGAGGCTTTGCATGCATCTGGAAGACTCTCA 1492 Query 1407 ACAGGTAGAAAGCAGAAGCGTCGATGTAGTTCTCTGAGAAGGCTATACCCAGGGCGAAAA 1466 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct 1493 ACAGGTAGAAAGCAGAAGCGTCGATGTAGTTCTCTTAGAAGGCTATACCCAGGGCCAAGA 1552 Query 1467 GAGAGTTAATCATTTCACCAGTCTCTTGCAAATGATTCAATCTTCAGTCC--A-TCTTTA 1523 |||||||||| | || || | |||||||||||||| | ||| ||||| | |||||| Sbjct 1553 GAGAGTTAATAAAATCCCCTGCCTCTTGCAAATGATGC--TCT-CAGTCTTTAGTCTTTA 1609 Query 1524 CATTATTTTCTGGATACAGCTAAGGCAGCAAGTTGTCTCTTATCTTAATCGGTTTAGTTA 1583 |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1610 CATTATTTTCTGGATACAGCTAAGGCAGCAAGTTGTCTCTTACCTTAACCGGTTTAGTTG 1669 Query 1584 GTTTG---C----A-TAGTGAGTACACCTTTATAAAAGTTTTGTCATTATAATGT 1630 ||||| | | ||||||||||| |||||||||||||||||||||||||||| Sbjct 1670 GTTTGAAACTTTGACTAGTGAGTACATCTTTATAAAAGTTTTGTCATTATAATGT 1724 > AT5G50330.1 | Symbols: | Protein kinase superfamily protein | chr5:20485223-20488684 REVERSE LENGTH=1744 Length=1744 Score = 1277 bits (691), Expect = 0.0 Identities = 1163/1390 (84%), Gaps = 36/1390 (3%) Strand=Plus/Plus Query 29 AATGCATGCGATCGATTTCAAAGAGATTCAGGAGAAGCTCTCTGATGGATTCCGGCCTTG 88 |||||||| | |||||||||||||||| ||||||||| |||| ||| | || || || || Sbjct 121 AATGCATGGGTTCGATTTCAAAGAGATCCAGGAGAAGATCTCCGATAGCTTTCGTCCATG 180 Query 89 GCAACGATCGTTTCAGTTCTGGGCTCGTGCCACTGACATCTACACTGGATACAAGGTATT 148 |||||| || ||||| ||||||| ||| || ||| | |||||||| || |||||||| || Sbjct 181 GCAACGCTCTTTTCAATTCTGGGTTCGAGCTACTAATATCTACACAGGCTACAAGGTGTT 240 Query 149 TCAACTTCGTATG-AA-CTTCGTTAAGGATGTC-AATAAGCACGAGGAAATGTGGGAGAG 205 ||||||||| | | || || || || |||| | || ||||| |||||||||||||| || Sbjct 241 TCAACTTCG-A-GTAAGTTTAGTAAAAGATG-CAAAGAAGCAAGAGGAAATGTGGGAAAG 297 Query 206 ACAACATGAACTTGCTGCT-CTCAAAATTTA-TTCTATGTGCTCTGACCTTGGTGGTTTC 263 ||||||||||| |||||| | || ||||| ||| ||||||||||| |||||||||||| Sbjct 298 ACAACATGAACAAGCTGCTGAT-AAGATTTACTTC-ATGTGCTCTGATCTTGGTGGTTTC 355 Query 264 TTCCTTAAGATTGCACAAATTCTAGGTAAACCTGACTTGGCTCCAGCTGCGTGGGTTAGA 323 |||||||||||||| ||| || ||| ||||||||| |||| |||||||||||||| | | Sbjct 356 TTCCTTAAGATTGCTCAACTTTTAGCAAAACCTGACATGGCACCAGCTGCGTGGGTGA-A 414 Query 324 AAA-CTCGTCACTTTGTGTGATCATGCTCCTGCCACATCATTTGATGCCATTCGAGTTGT 382 ||| || ||||||||||||||||| |||||||| || | |||||||| |||| | |||| Sbjct 415 AAAGCTTGTCACTTTGTGTGATCAAGCTCCTGCGACGCCGTTTGATGCGATTCAACTTGT 474 Query 383 CCTTGAGAAAGAGTTAGGTAAAAGCCTCGAAGATGTGTTTGAAACATTTGATGAGAAGCC 442 || ||||| ||||||||||||||| | | || | |||||||| |||||||| ||||| Sbjct 475 TCTAGAGAAGGAGTTAGGTAAAAGCATTGGTGAAATCTTTGAAACGTTTGATGAAAAGCC 534 Query 443 TCTTGGCTCTGCTTCTATTGCTCAGGTACACCGAGCAAGAGTAAAAGGTGACAAGAGGGA 502 |||||| |||||||||||||||||||| || |||||| |||||| ||| |||||| | | Sbjct 535 TCTTGGTTCTGCTTCTATTGCTCAGGTTCATAGAGCAATAGTAAAGGGTAACAAGATGAA 594 Query 503 TGTTGTTGTAAAGGTCCAACATCCTGGCGTTGAGAA-ATTGATGATGGTAGATATCAGAA 561 ||||||||||||||| |||||||||||| |||| || |||||||||| ||| || |||| Sbjct 595 TGTTGTTGTAAAGGTTCAACATCCTGGCATTGA-AAGATTGATGATGACAGACATAAGAA 653 Query 562 ACTTGCAAGTATTTGCATTATACATGCAGAAAACTGATATTAAATTTGACTTG-TTCTCC 620 |||||||| |||| || ||||||||||||| ||| ||||| ||||||||| || | ||| Sbjct 654 ACTTGCAACTATTCGCCTTATACATGCAGAGAACAGATATCAAATTTGACCTGCAT-TCC 712 Query 621 ATGACAAAAGAAATCGAGAAGCAGATTGGGTATGAATTCGACTTTAAAAGGGAGGCCAAT 680 || ||||| ||||| ||||| |||||||| |||||||| ||||| ||||||||||||||| Sbjct 713 ATAACAAAGGAAATGGAGAAACAGATTGGTTATGAATTTGACTTCAAAAGGGAGGCCAAT 772 Query 681 GCTATGGAAAAG-ATCCGACGTTTTCTTTATGATAACAATAGAAAGAGTCCTGTCCTGGT 739 || |||| |||| || ||| ||||||||||||| ||||| | |||| |||||| |||| Sbjct 773 GCAATGG-AAAGAATTCGATGTTTTCTTTATGAGAACAACAAAAAGTCTCCTGTTTTGGT 831 Query 740 TCCCAGGGTGCTTCCAAATTTGGTGACT-AGAAAGGTACTGGTGATGGATTACATGAACG 798 || || || || | | || |||||||| || | ||| |||||||||| ||||| || | Sbjct 832 ACCAAGAGTTCTGCGAGATATGGTGACTAAG-AGGGTTTTGGTGATGGAATACATTAATG 890 Query 799 GAATCCCAATCTTGAGCCTCGGTGATGAGATGGCCAAAAGAGGGATAAATCCTCATGGTA 858 |||| |||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| Sbjct 891 GAATTCCAATCCTGAGCATTGGTGATGAGATGGCTAAAAGAGGGATAAATCCTCATGGTA 950 Query 859 AAATGGCAGAGGCGGCAAAATTCAATATACTAAACAGTTTGTCCCAAGCATATGGCCAAA 918 | || |||||||| ||||| ||||||||| |||||||| |||| || |||||||||| Sbjct 951 AGATTGCAGAGGCAGCAAAGCACAATATACTTAACAGTTTATCCCGTGCGTATGGCCAAA 1010 Query 919 TGATACTGAAGAGTGGTTTCTTTCATGCGGATCCACATCCTGGGAATATCTTGATTT-CT 977 |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1011 TGATACTGAAAAGTGGTTTCTTTCATGCGGATCCACATCCTGGAAATATCTTGATTTGC- 1069 Query 978 AAAGGTTCA-GAGGTTGCACTGTTGGACTATGGACAAGTGAAGGAACT-CCCTGACCACC 1035 |||||| || ||||||||| || |||||||||| |||||||||||||| ||| || | Sbjct 1070 AAAGGT-CAAGAGGTTGCATTGCTGGACTATGGTCAAGTGAAGGAACTACCCA-ACAAGT 1127 Query 1036 TGAGACTTGGTTATGCAAATTTGGTAATTGCCATCGCTGATAACAATGCCTCATTG-GCA 1094 ||||||||||||||||||||||||| |||||||| |||||||||||||| ||| | | | Sbjct 1128 TGAGACTTGGTTATGCAAATTTGGTCATTGCCATGGCTGATAACAATGCTTCAC-GAGTA 1186 Query 1095 TTACAGAGCTTTAGGGAACTTGGCATAGC-TACAGTCGCCAAGTGTAAGAATGAGCAACA 1153 | |||||||||| ||||| | || || | |||||| ||||||||| |||||||||| || Sbjct 1187 TCACAGAGCTTTTGGGAAATGGGTTTA-CATACAGTGGCCAAGTGTGAGAATGAGCAGCA 1245 Query 1154 AGAGCTTCTCCAGTTAGCAAAAACAATGTTCGACACAGAGATGCCTCCTGGT-ACGACAA 1212 ||| ||||| | ||||||| ||||| | || || ||| |||||||| ||||| | |||| Sbjct 1246 AGAACTTCTGCGGTTAGCACAAACACTTTTTGATACAAAGATGCCTACTGGTCA-GACAG 1304 Query 1213 CTCTGCAACCTTTCTCAGTTGACTCTTCGATCAAAAAGATTTCGGTTGAGGCATTTCCAG 1272 | | ||||||||||||| |||||||||||| |||||||| | |||||| ||||||||| Sbjct 1305 TTTTACAACCTTTCTCAGATGACTCTTCGATTAAAAAGATAGCCGTTGAGACATTTCCAG 1364 Query 1273 AGGAGCTTTTCTCTGTTCTTCGCACGGTAGTTCTGTTAAGAGGACTCAGCGTAGGGATAG 1332 |||| || |||||||| |||||||| || |||||||||||||||||||| || ||||| | Sbjct 1365 AGGAACTGTTCTCTGTACTTCGCACTGTGGTTCTGTTAAGAGGACTCAGTGTTGGGAT-G 1423 Query 1333 GGA-TTAATTACTCCTGCGCTCAACACTGGAG-GTCTATGGCAGAAGAGGCTTTGCTTGC 1390 ||| ||||||| || || || |||| ||||| | | ||||| ||||||||||| ||||| Sbjct 1424 GGAGTTAATTATTCGTGTGCAGAACAATGGAGAG-CAATGGCCGAAGAGGCTTTACTTGC 1482 Query 1391 ATCTGGAAGA 1400 |||||||||| Sbjct 1483 ATCTGGAAGA 1492 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80521674180 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5