BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492611 Length=1525 Score E Sequences producing significant alignments: (Bits) Value AT4G22580.1 | Symbols: | Exostosin family protein | chr4:11889... 2182 0.0 > AT4G22580.1 | Symbols: | Exostosin family protein | chr4:11889098-11890725 REVERSE LENGTH=1628 Length=1628 Score = 2182 bits (1181), Expect = 0.0 Identities = 1381/1474 (94%), Gaps = 28/1474 (2%) Strand=Plus/Plus Query 1 AAACTACCACTCTCACTCCGACAACCTCCATAACAATGGCTTTCAAATCCACCGTCACAA 60 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 2 AAACTACCACTCTCACTCCGACAACATCCATAACAATGGCTTCCAAATCCACCGTCACAA 61 Query 61 CATTGACCA---------tcttcttcttcttcttcGTCGAGCCTAGGGTTGTTTCACAGC 111 ||||||||| ||||||||||||||||| ||||||||| |||| || |||| Sbjct 62 CATTGACCATCTTCTTCTTCTTCTTCTTCTTCTTCATCGAGCCTAAGGTTCAGTCTCAGC 121 Query 112 AAATCTCAGCCGTCGATTCAGAATGCACCAACCGTTGGATCCACATCCGTACACTCCCAT 171 ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 122 AAATCTCAGCCGTTGATTCAGAATGCACCAACCGTTGGATTCACATCCGAACACTCCCAT 181 Query 172 CACGATTCAATCTCGATCTTCTCTCAACTTGTAATCGTTACCCAATCACCGACGATCTTT 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 CACGATTCAATCTCGATCTTCTCTCAACTTGTAATCGTTACCCAATCACCGACGATCTTT 241 Query 232 GCCCTTACTTAGCCAATCACGGACTCGGCCCAAAAACCCATACCCGTACTCGAAGCTGGT 291 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 242 GCCCTTACTTAGCCAATCACGGACTCGGCCCAAAAACCCATACCCGTACCCGAAGCTGGT 301 Query 292 ATCGAACCGACCCGTTACTTCTCGAACTCATTTTCCACCGTCGGATTCTCGAATATCCAT 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 ATCGAACCGACCCGTTACTTCTCGAACTCATTTTCCACCGTCGGATTCTCGAATATCCAT 361 Query 352 GTCTCACACCCGACCCGGATCTAGCCTCCGCCGTTTATCTCCCTTACTACGCCGGTATCG 411 ||||||||||||||||| |||| |||||||| | || ||||||||||||||||| |||| Sbjct 362 GTCTCACACCCGACCCGAATCTCGCCTCCGCAATCTACCTCCCTTACTACGCCGGCATCG 421 Query 412 ATTCTCTCCGTTATCTCTACGGACCCGATTTAAACTCAAGCGCTGATCACGGGTCGGATC 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 ATTCTCTCCGTTATCTCTACGGACCCGATTTAAACTCAAGCGCTGATCACGGGTCGGATC 481 Query 472 TTCTCGAGTTTTTGACCCGTGATCAACCCGAGATCTGGTCTCGTCGCTCCGGTCATGATC 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 482 TTCTCGAGTTTTTGACCCGTGATCAACCCGAGATCTGGTCTCGTCGCTCCGGTCATGATC 541 Query 532 ATTTCCTCGTTATGGCTCGACCCGCTTGGGATTTCTCTCAGCCGTTGACCGTTGACCCTC 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 ATTTCCTCGTTATGGCTCGACCCGCTTGGGATTTCTCTCAGCCGTTGACCGTTGACCCTC 601 Query 592 CGATTTGGGGCACGTCGTTTCTAGAACGCCGTGAGTTTTTCAATCTAACGGCGTTAACTC 651 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 602 CGATTTGGGGAACGTCGTTTCTAGAACGCCGTGAGTTTTTCAATCTAACGGCGTTAACTC 661 Query 652 TCGAATCTCGTTTCTGGCCGTGGCAAGAACAAGCCGTCCCTTATCCGACGTCGTTTCACC 711 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 662 TCGAATCTCGTTACTGGCCGTGGCAAGAACAAGCCGTTCCTTATCCGACGTCGTTTCATC 721 Query 712 CACACAGCTTGCCGTTTTTGGAATCGTGGATCCGTCGTGTCCGTCGCTCACGGCGAACTT 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 722 CACACAGCTTGCCGTTTTTGGAATCGTGGATCCGTCGTGTCCGTCGCTCACGGCGAACTT 781 Query 772 CTCTTATGCTATTCGCCGGCGGCGGAGGTACCTCCTCTTCTCCGAACATCCGTCGTAGTA 831 |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct 782 CTCTTATGCTATTCGCCGGCGGTGGTGGTACCTCCTCTTCTCCTAACATCCGTCGTAGTA 841 Query 832 TCCGATTAGAGTGTACAAACGTAAACGCCAC-CGAATCGGAATTGAAATCGGATAAAATC 890 |||| |||||||| || | | ||||||| || | ||||||| | || | | ||| || Sbjct 842 TCCGCTTAGAGTGCACTAGCATAAACGCAACAC-AATCGGA-T--AA-T---A-AAA-TC 891 Query 891 TGCGATTTTGTTGATTGCTCTAATGGAATCTGTGAGCATGATCCGCTTAGATTCATGAGA 950 |||||||| || ||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct 892 TGCGATTTCGTCGATTGTTCTAACGGAATCTGTGAGCATGATCCGATTAGATTCATGAGA 951 Query 951 CCAATGTTACAATCATCGTTTTGCTTACAACCACCAGGAGATACACCAACACGTAAAGCT 1010 || |||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||| Sbjct 952 CCGATGTTACAATCATCGTTTTGTTTACAACCACCGGGAGATACACCAACAAGGAAAGCT 1011 Query 1011 ACATTCGACGGAATCATCGCCGGATGTATACCGGTGTTTTTCGAAGACCAAACGGCGAAA 1070 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1012 ACATTCGACGGAATCATCGCCGGATGTATACCGGTGTTTTTCGAGGATCAAACGGCGAAA 1071 Query 1071 ATGCAGTACAAATGGCATTTACCGGAATCCGAATTCGCGCAGTTTTCGGTTACGATTCCG 1130 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 1072 ATGCAGTACAAATGGCATTTACCGGAGTCCGAATTCGCGGAGTTTTCGGTTACGATTCCG 1131 Query 1131 AAAGAAGATGTTGTATTTAGAGGAGTTAGAATCCAAGATGTGTTGATGAGTATACCTAAA 1190 || |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1132 AAGGAAGATGTAGTGTTTAGAGGAGTTAGAATACAAGATGTGTTGATGAGTATACCTAAA 1191 Query 1191 GAAGAAGTTACGAGAATGAGAGAAAGAGTTATAGAGATGATGCCTAGAGTTATGTATAGA 1250 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 GAAGAAGTTACTAGAATGAGAGAAAGAGTTATAGAGATGATGCCTAGAGTTATGTATAGA 1251 Query 1251 AGACATGGAGCTTCAATGGGATTGATGAATAAGAAAGATGCTGTTGATATTGCCATTGAT 1310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1252 AGACATGGAGCTTCAATGGGATTGATGAATAAGAAAGATGCTGTTGATATTGCTATTGAT 1311 Query 1311 GGAGTTTTGGACAAGATTAAATCTAGAGTTTGATGATTAGTAACATCACTTATAAACAGG 1370 ||||||||||||| ||||| |||||||||||||| ||| ||||| || || |||||||| Sbjct 1312 GGAGTTTTGGACAGGATTATATCTAGAGTTTGATTCTTACTAACAACAGTTTTAAACAGG 1371 Query 1371 TATGTATAATGTTGTTGTTTGTTTAG-TTATTTATACTTAAAAATTC-TTTTTGATTGTT 1428 ||||||| ||||||||||||||||| || || |||||| ||||||| |||||||||||| Sbjct 1372 TATGTATTATGTTGTTGTTTGTTTAAATTGTT-ATACTTCAAAATTCATTTTTGATTGTT 1430 Query 1429 --TGTTGGATGCAAAATCTCATTGAGATTTTTTG 1460 |||| ||| ||||||||||||||||||||| Sbjct 1431 CATGTT---TGCCAAATCTCATTGAGATTTTTTG 1461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75250616955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5